Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12008 | Sorghum | cytosol | 68.81 | 75.0 |
| TraesCS2B01G297900.1 | Wheat | cytosol | 51.15 | 53.35 |
| TraesCS2A01G280600.1 | Wheat | cytosol | 51.15 | 53.22 |
| TraesCS2D01G279400.1 | Wheat | cytosol | 50.23 | 52.27 |
| Os04t0379800-01 | Rice | cytosol | 46.33 | 49.51 |
| KRG97337 | Soybean | extracellular | 18.12 | 32.92 |
| GSMUA_Achr6P20770_001 | Banana | cytosol, endoplasmic reticulum | 21.56 | 29.28 |
| VIT_05s0029g00640.t01 | Wine grape | cytosol | 27.52 | 28.24 |
| KRH31580 | Soybean | cytosol, nucleus | 25.0 | 28.02 |
| CDX77476 | Canola | nucleus | 26.15 | 27.47 |
| AT3G23910.1 | Thale cress | cytosol | 26.15 | 27.08 |
| PGSC0003DMT400067932 | Potato | extracellular, vacuole | 23.85 | 26.94 |
| Solyc09g092180.2.1 | Tomato | cytosol | 25.0 | 26.27 |
| AT3G24255.7 | Thale cress | endoplasmic reticulum | 25.46 | 13.41 |
Protein Annotations
| EnsemblPlants:Zm00001d004020_P003 | EnsemblPlants:Zm00001d004020_T003 | EnsemblPlantsGene:Zm00001d004020 | EntrezGene:100381501 | ncoils:Coil | ProteinID:ONM18174.1 |
| SEG:seg | UniParc:UPI0008437D14 | UniProt:A0A1D6ECZ7 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2:-:76069583..76077522
Molecular Weight (calculated)
49180.8 Da
IEP (calculated)
4.346
GRAVY (calculated)
-0.180
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAQALVPA QGPDEAPLDA SAIHSRVEQL SLKRLEVEPE AEVAEDEVAL GLDSTHKAAQ DAMDEWDSAT AAVSIDDLDA SLLSIVFLLR MHHLQITMPL
101: LWSDAYLEQL RKDVAMAEQG NQKVSGEISV TAETTFNDMI QLDVGIEMLE SLISNLGPKA LNHFDESSVL GLSDSTDSCR NRSIADKDYI YELELDHQIE
201: KSTMELEILQ HLQRDDEMFQ LESKLLPFGA KILDFKDDCL RMFLKAPILT SDCEIYGQKF NCSIDSFISD HELLIEIDKI NMEPKKVQII PDDMSVDILI
301: ERMESSRDTV CSPTLIWLIQ QCQHQSIINA LRRSLVNDAN SSRHCFEYLN KKEMIVAHLD RGIDVSIKMS SDWPLCSYGL KLISIRNAGD RPTNIASTIL
401: CKTKELANEL EPQIRQHLLT LVDAVEDIII RELRSR
101: LWSDAYLEQL RKDVAMAEQG NQKVSGEISV TAETTFNDMI QLDVGIEMLE SLISNLGPKA LNHFDESSVL GLSDSTDSCR NRSIADKDYI YELELDHQIE
201: KSTMELEILQ HLQRDDEMFQ LESKLLPFGA KILDFKDDCL RMFLKAPILT SDCEIYGQKF NCSIDSFISD HELLIEIDKI NMEPKKVQII PDDMSVDILI
301: ERMESSRDTV CSPTLIWLIQ QCQHQSIINA LRRSLVNDAN SSRHCFEYLN KKEMIVAHLD RGIDVSIKMS SDWPLCSYGL KLISIRNAGD RPTNIASTIL
401: CKTKELANEL EPQIRQHLLT LVDAVEDIII RELRSR
001: MEEETHDGSL DLQEIRRRVK ELDFFPRNCR EEPVESCSSD YETLVVQDFV LQFEPKVKEI VEEYGDVDLL DVEDSDAYLE YLRNELQSVE AESAKVSEEI
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
Arabidopsis Description
HAPp48,5 protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:P92952]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.