Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- plastid 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31580 | Soybean | cytosol, nucleus | 92.5 | 57.07 |
| VIT_05s0029g00640.t01 | Wine grape | cytosol | 55.83 | 31.53 |
| PGSC0003DMT400067932 | Potato | extracellular, vacuole | 47.92 | 29.79 |
| GSMUA_Achr6P20770_001 | Banana | cytosol, endoplasmic reticulum | 39.17 | 29.28 |
| Solyc09g092180.2.1 | Tomato | cytosol | 47.08 | 27.23 |
| CDX77476 | Canola | nucleus | 46.67 | 26.99 |
| AT3G23910.1 | Thale cress | cytosol | 45.83 | 26.13 |
| Os04t0379800-01 | Rice | cytosol | 38.33 | 22.55 |
| TraesCS2B01G297900.1 | Wheat | cytosol | 37.92 | 21.77 |
| TraesCS2A01G280600.1 | Wheat | cytosol | 37.92 | 21.72 |
| TraesCS2D01G279400.1 | Wheat | cytosol | 37.92 | 21.72 |
| EES12008 | Sorghum | cytosol | 33.33 | 20.0 |
| Zm00001d004020_P003 | Maize | cytosol | 32.92 | 18.12 |
| AT3G24255.7 | Thale cress | endoplasmic reticulum | 45.0 | 13.04 |
Protein Annotations
| EMBL:ACUP02010794 | EnsemblPlants:KRG97337 | EnsemblPlantsGene:GLYMA_18G001700 | EntrezGene:100785594 | PANTHER:PTHR36037 | ProteinID:KRG97337 |
| ProteinID:KRG97337.1 | UniParc:UPI0002957661 | UniProt:K7MP58 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr18:+:152055..155509
Molecular Weight (calculated)
27487.5 Da
IEP (calculated)
6.522
GRAVY (calculated)
0.055
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVLKSLQN LQFTVKWFEV VEQIEYAFME LKVLAFGENC IRLSLQTYMP TFVGISYLPR VEATVDTAEL NHELLIEVFE GTMRSKNVQV FPNDIYVNDI
101: VDTAKFVSKS SLQWFIQKVQ DRIILSTLRH LVVKDANKSR YSLEYLDKDK TIVVHMAGGI DAYIKLSLGW PIFVSPLKLI CIKGSDDLKR TSLSFRCKVE
201: KLANSLDTHI RQNISSFVDA VEEVLMEQLQ LDLRVGDNSG
101: VDTAKFVSKS SLQWFIQKVQ DRIILSTLRH LVVKDANKSR YSLEYLDKDK TIVVHMAGGI DAYIKLSLGW PIFVSPLKLI CIKGSDDLKR TSLSFRCKVE
201: KLANSLDTHI RQNISSFVDA VEEVLMEQLQ LDLRVGDNSG
001: MDLLDSSRLQ RDLEGLLLSL DSMSSQDVEK SKENQPSSSS MEVCEVIDDD KFKMFELENQ MEEKRMILKS LEDLDSLRKR FDAAEQVEDA LTGLKVLEFD
101: GNFIRLQLRT YIQKLDGFLG QHKFDHITEP SELIHELLIY LKDKTTEITK FEMFPNDIYI GDIIEAADSF RQVRLHSAVL DTRSSVQWVV AKVQDKIIST
201: TLRKYIVMSS KTIRYTFEYY DKDETIVAHI AGGIDAFLKV SDGWPLLNTP LKLASLKNSD NQSKGISLSL ICKVEELANS LDLETRQNLS GFMDAIEKIL
301: VEQTREELQS NKSSQK
101: GNFIRLQLRT YIQKLDGFLG QHKFDHITEP SELIHELLIY LKDKTTEITK FEMFPNDIYI GDIIEAADSF RQVRLHSAVL DTRSSVQWVV AKVQDKIIST
201: TLRKYIVMSS KTIRYTFEYY DKDETIVAHI AGGIDAFLKV SDGWPLLNTP LKLASLKNSD NQSKGISLSL ICKVEELANS LDLETRQNLS GFMDAIEKIL
301: VEQTREELQS NKSSQK
Arabidopsis Description
HAPp48,5 protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:P92952]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.