Factsheet for Bra009748.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010847.1-P
Bra030221.1-P
Bra038448.1-P
Bra039922.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24310.1	Bra010847.1-P	AT1G29170.1	17267444
AT5G24310.1	Bra030221.1-P	AT2G22640.1	17267444
AT5G24310.1	Bra039922.1-P	AT2G22640.1	17267444
AT5G24310.1	Bra038448.1-P	AT4G16340.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88092	Canola	nucleus	99.69	100.0
AT5G24310.1	Thale cress	nucleus	82.61	82.87
Bra017996.1-P	Field mustard	nucleus	76.4	77.6
PGSC0003DMT400047722	Potato	nucleus	64.6	65.82
Solyc03g083030.2.1	Tomato	nucleus	65.53	64.92
KRH64414	Soybean	nucleus	63.98	63.38
KRH65850	Soybean	nucleus	61.49	61.11
VIT_16s0098g01720.t01	Wine grape	extracellular	65.84	57.45
KRH53518	Soybean	endoplasmic reticulum, golgi	65.22	57.22
GSMUA_Achr5P09600_001	Banana	nucleus	28.26	50.84
KRH65551	Soybean	cytosol, endoplasmic reticulum, extracellular	25.16	49.69
GSMUA_Achr1P28080_001	Banana	cytosol	43.48	43.08
Bra025451.1-P	Field mustard	nucleus	30.43	35.51
Bra028522.1-P	Field mustard	nucleus	30.75	34.49
Bra004555.1-P	Field mustard	nucleus	25.16	26.73
Bra000416.1-P	Field mustard	cytosol	23.6	25.0

Protein Annotations

EnsemblPlants:Bra009748.1	EnsemblPlants:Bra009748.1-P	EnsemblPlantsGene:Bra009748	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0009987	GO:GO:0010090
GO:GO:0015630	GO:GO:0016043	GO:GO:0030154	GO:GO:0048364	InterPro:ABI	PANTHER:PTHR10460
PANTHER:PTHR10460:SF10	SEG:seg	UniParc:UPI000253F176	UniProt:M4CZV1	MapMan:20.2.2.2.5	:

Description

AT5G24310 (E=2e-121) ABIL3 | ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)

Coordinates

chrA06:+:17001010..17002645

Molecular Weight (calculated)

36571.4 Da

IEP (calculated)

10.201

GRAVY (calculated)

-0.815

Length

322 amino acids

Sequence
(BLAST)

001: MSAAATMHMP REGSNYDEIS MQQSLLFSDS LKDLKNLRTQ LYSAAEYFEL SYTNDGDTQS VVETLKDYAI KALVNTVDHL GSVTYKVNDF VDEKVDQVTG
101: TELRVACIEQ RLRMCQEYMD HEGRSQQSLV INTPKFHKRY ILPSAGEIKK GGNLAKLKSV ESSIGEEADW NQFRNAVRTT IRETPPPLLR KPVLPSPPPQ
201: RRTQRSATFS LSSISNTAPK KEQDKRAVSP HRFPLLRSGS VAIRPTSVSR PTTPSKSRTI TPKRYPSEPR RSASVRAAFE KEAQKEPEQQ QQPSKSKRLL
301: KALLSRRKTK KDDTLYTYLD EY

Best Arabidopsis Sequence Match ( AT5G24310.1 )
(BLAST)

001: MSAAATMPMP REASNYDEIS MQQSMLFSDS LKDLKNLRTQ LYSAAEYFEL SYTNDEQKQI VVETLKDYAI KALVNTVDHL GSVTYKVNDF VDEKVDEVAG
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE GSFDGEDDWN QFRNAVRATI RETPPPPVRK PILQSPSQRK
201: PQRSATFSFS SIATAPKKEQ DKRAVSPHRF PLLRSGSVAI RPSSISRPTT PSKSRAVTPT PKRYPSEPRR SASVRVAFEK EAQKEPEHQQ QPSKSKRLLK
301: ALLSRRKTKK DDTLYTYLDE Y

Arabidopsis Description

ABIL3Protein ABIL3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.