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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:cytosol, nucleus
PProwler:secretory
TargetP:secretory
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G042610.1 Barley cytosol 4.68 80.6
HORVU2Hr1G126350.1 Barley cytosol 4.68 80.6
HORVU0Hr1G014100.2 Barley cytosol 11.26 68.78
GSMUA_Achr5P29540_001 Banana cytosol 12.12 33.41
GSMUA_Achr5P14370_001 Banana cytosol 16.88 23.0
TraesCS5D01G484800.1 Wheat nucleus 41.04 21.23
TraesCS5B01G484800.1 Wheat nucleus 40.78 21.08
TraesCS5A01G472100.1 Wheat nucleus 40.87 20.99
EER93209 Sorghum cytosol 35.5 19.45
Zm00001d034616_P001 Maize cytosol 35.93 19.38
HORVU0Hr1G014110.1 Barley cytosol, nucleus, plastid 30.65 17.18
Os01t0208600-01 Rice cytosol 15.41 13.34
Os03t0817000-01 Rice cytosol 4.5 11.74
Os07t0691700-01 Rice nucleus 8.57 11.69
Os03t0298700-01 Rice cytosol 12.81 11.36
Os03t0298800-01 Rice nucleus 0.26 1.29
Protein Annotations
Gene3D:1.20.5.340Gene3D:1.20.58.1570MapMan:20.2.2.2.4ProteinID:BAF13611.1ProteinID:BAS87049.1GO:GO:0003674
GO:GO:0003779GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005856GO:GO:0008150GO:GO:0009987GO:GO:0016043GO:GO:0030036
EnsemblPlantsGene:Os03g0816900EnsemblPlants:Os03t0816900-01PANTHER:PTHR12902PANTHER:PTHR12902:SF12UniProt:Q0DMC7InterPro:SCAR/WAVE_fam
UniParc:UPI0000E1229DSEG:seg::::
Description
Suppressor of cAMP Receptor-Like Protein 3, SCAR-like Protein 3, suppressor of cAMP receptor 2Conserved hypothetical protein. (Os03t0816900-01)
Coordinates
chr3:+:34257858..34263571
Molecular Weight (calculated)
127740.0 Da
IEP (calculated)
4.134
GRAVY (calculated)
-0.689
Length
1155 amino acids
Sequence
(BLAST)
0001: GVAMAGLVGV LRQLGDLAEF AAEIFHDLHE DVMATASRGH GLMLRLRQLE AEFPAVEKAI ISQSDHSNYP HDDGVEWHTN LQIDQNMITQ GDMPRFILDS
0101: YEECRGPPRL FTLDKFDVAG AGASLKRYSD PSFFKTEHSS DMIETDAVIE KKPRKIKKKA LRWRKGETLE SLLIANSESH TTSKDRSSRK VPPRTTKLKY
0201: RYPRESDHKN ISRICREHLQ EIISSQQKIF SNYSSRYYHP KFRLTESSET ASSFGEIDNF SARAQSSAKL ELTKVVPINE FDTKGIAPTH INGSDCLEAL
0301: EADDRQLQAT QHEPDKVEDV CKRSLVEQNA MLSNSDRMQS VQEENLLSAM VPADQNDDRC RPDDTGSDQE NFVDALNNME SEGEAHAEMK IKKDPGAKME
0401: LDELNFHRDE GENERHTEFS ELGHVIDSSP WLNDSYNGGE PNHAISSNTN FSGVDCTNDE EPSNDVDLME MDVSSSSSVF SDDNDVFRTN GNMNGFQQYQ
0501: EASLSNDHHA VIAHSSDKQS SQKSSGLDGS SIESNDFIEK PFHSLEDDKN FAPDGTSVIL GRPNDVSQCE EEIEVGNADD SLLQPTISNQ EVHRSNNQLE
0601: GVAMHASISS GKVASFPDMD PGMCTKDLEL DNVLVPKETV ANTPPTGLGT DHIHEHVDEL DSGVAPINSS IQSDSTYESD DDDMAEDLNS LPEDDLYKHD
0701: VEDLYKHVLE DDGIIALGKG PCSTRANMHQ EDPMEVSDVR GDFSNGQELP VLTETASPQG ELVGGGELPL LTETASPQGG EEDLADEVVV ISSRDLNDEK
0801: KPSLAEVPLA CGDASLLDSS ASCLEHDEST ETGEIAKSDE VLVNVEVAEE SITGRFTDDM TPFQEDLPDG AKYSEDAEFL ANPRVDNSRH DVQLQSSSPC
0901: REELETVKAP CENLCALDES REHIFEKSVL QINNLPQHIE TKNTGEACSD IDDIQHLSAL HCPKNPVCQE ELPDETNLSA DVQYHCDVEK GGAVILNSKM
1001: VEEQPENIDL VREPRAQDSF GTNPFMDPGY KANHALADPC PSYQPCFSEE EQDFISELLI PHGNMGIEDL NPVPVADSLW EPATPPDEVP LPSEVMTEED
1101: FRSFCHEYHE MDLTATPESI DDKPASDSNV VSSSLVTSES EFLYCVSAVR TGVDQ
Best Arabidopsis Sequence Match ( AT2G38440.1 )
(BLAST)
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.