Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G014100.2 | Barley | cytosol | 8.2 | 96.83 |
| HORVU2Hr1G126350.1 | Barley | cytosol | 2.87 | 95.52 |
| TraesCS5B01G484800.1 | Wheat | nucleus | 94.45 | 94.4 |
| TraesCS5A01G472100.1 | Wheat | nucleus | 90.33 | 89.68 |
| Os03t0816900-01 | Rice | golgi | 21.23 | 41.04 |
| GSMUA_Achr5P29540_001 | Banana | cytosol | 7.03 | 37.47 |
| EER93209 | Sorghum | cytosol | 31.97 | 33.87 |
| Zm00001d034616_P001 | Maize | cytosol | 31.08 | 32.41 |
| GSMUA_Achr5P14370_001 | Banana | cytosol | 9.23 | 24.29 |
| TraesCS2D01G088200.1 | Wheat | nucleus | 3.63 | 20.2 |
| TraesCS3D01G150600.1 | Wheat | cytosol | 10.3 | 17.93 |
| TraesCS4D01G190300.1 | Wheat | nucleus | 9.94 | 17.02 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G484800.1 | EnsemblPlantsGene:TraesCS5D01G484800 | Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030036 |
| InterPro:SCAR/WAVE_fam | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 | SEG:seg | MapMan:20.2.2.2.4 | : |
Description
No Description!
Coordinates
chr5D:+:520774367..520783616
Molecular Weight (calculated)
243728.0 Da
IEP (calculated)
4.060
GRAVY (calculated)
-0.637
Length
2233 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIRYQVRNEY GLADPALYAP EGEEDDPEAL LEGVAMAGLV GLLRQLGDLA EFAAEIFHDL HEDVMATASR GHGLMLRLQQ LEAEFPAVEK AIIAQTDHST
0101: YLHDDGVEWH PNLQLNQNLI TIGDMPRFIL DSYEECRGPP HLFTLDKFDV AGAGASLKRY SDPSFFKMGQ TSNMIEPDYL REKKPRRIKK KAMRRKGETL
0201: ESLLIANSES QITSSKDRSS RKVPPRTTKL KSRHLRDSYN KTISRICREQ LQEVISSQQK ILSNYSARNF HAKFRSTDSS EIISSFGELD NFSAPAQSFT
0301: KHELTKVVPV DESDTLVTAS APINGPIHLE VDDGQFLATQ QEHFEMEQIC KGSPLQSVQE EKLQLAVVPV YHDDDPCRPD DIGSDQDKFI DTLNTESEGE
0401: ADHSMKSQKN LSAEMEVDNL NCDGKEAESV LDVQYSELGP AEDLSSGLSN PCNDTEPTRA DSFLLSDSSP SAVSDTKDTN SDSDSCKQLS GDNWINDKES
0501: CNDVDLMDVS SSSSVTSDDN GNFETDTNLN GCVQNQEVSF LPSNDYHAGA IPSSEKQLSQ TSSGLDGLAS ISSDYHEIAY RSAEDGQNNV VDTSTISGQP
0601: NDVSHAGGEV EVSHADDLLL QSSTHNQEQI QLSKEPFEEC TSLAAVVQET DTKVASLPDM DPVVHMNDLE FNNVALPAEI DTSTIPTSLD PDVTHKHSDK
0701: LDSGVIPIHS ITSDNPSYES DHGELVEELH CLPDEDLYKH ITEDQEIAAL EKGPCSVRLD THKEDSMQAS VVPMHFSSIQ VIPGLAESVP TFQDDTEAHT
0801: SEMLEQSPRV LNDDTKSSLI DVPSASSTAP ILDTIKSCME YHESIETVKN VEHSEVLVDA EVVEESTTSR LDDDMIPSEE EHTDGAKHTE KAEVDAEGVE
0901: ESTTGRFDDD MTPSEEEHTD GAKHTEKAEV LPTNSSHDIP LQSSPFREDI EAVEATCENL GSLEESRGHI FRESMLQTAN LPQPIEIETS GGTLGGSDDI
1001: LYVTPSHFPE DSCQEELPEE TTLIAEEVPC QSDLDKDVTV SPNSNMVWEQ LSDVDQDLVR ELSAQDSFGT NPFVDPGYMV SSTDPLPSMS YQPCCSEEED
1101: DFLSELLIQQ CNIQAKENLY PLDDSLWEPA TPPDEAPLPS EVMTEQDFRS LCHEYHEIDF TAATEGFDYK PSSDSNDIAN DCVVSVLDSP CSVSVLSAEL
1201: DQEVVCSKPD SQLAECSSAR DITGETIVPL SAMKVPDGEK QAVDSDLRSH ESFSDEKNLE LDIFSIPVKS EQEQRPLPEV VPVKEEQDPC ANLPPHAFIN
1301: EKVGELDVHS SNSPVEPLVG ARGLDELDVL PLRKPIPTQE SDSRVLDGPN SQSVPSSSTD KTVDDLDVPP LRIALEAEES EDQFTGENDS QIATSYVCEK
1401: IEEPAAPPSN AVLVEKEAEV CAPSELDSQI ASCSLPNKKI DELDCPPLIG SALIEDESED HISGVPDSQI APYSSVNDKI VGPCASTSVN DTEAGWETCP
1501: SPELDPQFAP CPLSDYNVSR LDGTPSCNVQ VEAHNGPYYS PEFDTRIAPY SSVNDKIDVP GAATSVHDME VEQGWEACAS PELDSQIATC PASEDRVGQL
1601: DGSSSCNAQV EAAQIAPYSS VNDRIDVPGA STSIHDMEVE QGWEACASPE LDSQIAPCPM SEDRVGELDG SSSCNVQVEA ENASYCSPES DSQIAPGSLN
1701: SSALAERSTV ASTSVMHSTK EIDRVFPVPP HPEPFQSVCS EDPQKLPPLP PLQWRLGRPR LGLLSKKDRV PEPASRTTSI LPVSSQDMDN GLVSLDRMAE
1801: PIASVSSQDI KERYLNSVVD NNDQRVESGL PGEHDRPFSE ACGNIKHQGH ITSSPSEAEE HLNDSGATAH VINQQDRQQH LLCSDISDIA EHLSSTDPAA
1901: SEDDKTVDDH NAARNVQFHK VSSSTPGHVS ENGSCQQSQH GESLSGTPDN EEHSSNASDE EKNLKDQSIT RGLPLDTTAS GSVLEEGNSQ ESKLPEQDAD
2001: NLKGGLSEGQ SHTAESMVSE DYPHGDHNLD TESILQPNPS WPSNISKYLG DLDEGGYAHA EQPPVMGWTV GPQMLHPNYG ISTEGSRFEP EVTDYRLTRK
2101: PVSVRNIPRN PLVDAVAAHD RSTMRKVSEL APPTDKPNTD DKNMWLEQIR KKVGELAPTA DKPNTNDKNL WLEQIRNKTF DLKPVGSAIP TSMRAPARAS
2201: SGNLRVAAII EKANAIRQAV GSDDEDDDNW SDT
0101: YLHDDGVEWH PNLQLNQNLI TIGDMPRFIL DSYEECRGPP HLFTLDKFDV AGAGASLKRY SDPSFFKMGQ TSNMIEPDYL REKKPRRIKK KAMRRKGETL
0201: ESLLIANSES QITSSKDRSS RKVPPRTTKL KSRHLRDSYN KTISRICREQ LQEVISSQQK ILSNYSARNF HAKFRSTDSS EIISSFGELD NFSAPAQSFT
0301: KHELTKVVPV DESDTLVTAS APINGPIHLE VDDGQFLATQ QEHFEMEQIC KGSPLQSVQE EKLQLAVVPV YHDDDPCRPD DIGSDQDKFI DTLNTESEGE
0401: ADHSMKSQKN LSAEMEVDNL NCDGKEAESV LDVQYSELGP AEDLSSGLSN PCNDTEPTRA DSFLLSDSSP SAVSDTKDTN SDSDSCKQLS GDNWINDKES
0501: CNDVDLMDVS SSSSVTSDDN GNFETDTNLN GCVQNQEVSF LPSNDYHAGA IPSSEKQLSQ TSSGLDGLAS ISSDYHEIAY RSAEDGQNNV VDTSTISGQP
0601: NDVSHAGGEV EVSHADDLLL QSSTHNQEQI QLSKEPFEEC TSLAAVVQET DTKVASLPDM DPVVHMNDLE FNNVALPAEI DTSTIPTSLD PDVTHKHSDK
0701: LDSGVIPIHS ITSDNPSYES DHGELVEELH CLPDEDLYKH ITEDQEIAAL EKGPCSVRLD THKEDSMQAS VVPMHFSSIQ VIPGLAESVP TFQDDTEAHT
0801: SEMLEQSPRV LNDDTKSSLI DVPSASSTAP ILDTIKSCME YHESIETVKN VEHSEVLVDA EVVEESTTSR LDDDMIPSEE EHTDGAKHTE KAEVDAEGVE
0901: ESTTGRFDDD MTPSEEEHTD GAKHTEKAEV LPTNSSHDIP LQSSPFREDI EAVEATCENL GSLEESRGHI FRESMLQTAN LPQPIEIETS GGTLGGSDDI
1001: LYVTPSHFPE DSCQEELPEE TTLIAEEVPC QSDLDKDVTV SPNSNMVWEQ LSDVDQDLVR ELSAQDSFGT NPFVDPGYMV SSTDPLPSMS YQPCCSEEED
1101: DFLSELLIQQ CNIQAKENLY PLDDSLWEPA TPPDEAPLPS EVMTEQDFRS LCHEYHEIDF TAATEGFDYK PSSDSNDIAN DCVVSVLDSP CSVSVLSAEL
1201: DQEVVCSKPD SQLAECSSAR DITGETIVPL SAMKVPDGEK QAVDSDLRSH ESFSDEKNLE LDIFSIPVKS EQEQRPLPEV VPVKEEQDPC ANLPPHAFIN
1301: EKVGELDVHS SNSPVEPLVG ARGLDELDVL PLRKPIPTQE SDSRVLDGPN SQSVPSSSTD KTVDDLDVPP LRIALEAEES EDQFTGENDS QIATSYVCEK
1401: IEEPAAPPSN AVLVEKEAEV CAPSELDSQI ASCSLPNKKI DELDCPPLIG SALIEDESED HISGVPDSQI APYSSVNDKI VGPCASTSVN DTEAGWETCP
1501: SPELDPQFAP CPLSDYNVSR LDGTPSCNVQ VEAHNGPYYS PEFDTRIAPY SSVNDKIDVP GAATSVHDME VEQGWEACAS PELDSQIATC PASEDRVGQL
1601: DGSSSCNAQV EAAQIAPYSS VNDRIDVPGA STSIHDMEVE QGWEACASPE LDSQIAPCPM SEDRVGELDG SSSCNVQVEA ENASYCSPES DSQIAPGSLN
1701: SSALAERSTV ASTSVMHSTK EIDRVFPVPP HPEPFQSVCS EDPQKLPPLP PLQWRLGRPR LGLLSKKDRV PEPASRTTSI LPVSSQDMDN GLVSLDRMAE
1801: PIASVSSQDI KERYLNSVVD NNDQRVESGL PGEHDRPFSE ACGNIKHQGH ITSSPSEAEE HLNDSGATAH VINQQDRQQH LLCSDISDIA EHLSSTDPAA
1901: SEDDKTVDDH NAARNVQFHK VSSSTPGHVS ENGSCQQSQH GESLSGTPDN EEHSSNASDE EKNLKDQSIT RGLPLDTTAS GSVLEEGNSQ ESKLPEQDAD
2001: NLKGGLSEGQ SHTAESMVSE DYPHGDHNLD TESILQPNPS WPSNISKYLG DLDEGGYAHA EQPPVMGWTV GPQMLHPNYG ISTEGSRFEP EVTDYRLTRK
2101: PVSVRNIPRN PLVDAVAAHD RSTMRKVSEL APPTDKPNTD DKNMWLEQIR KKVGELAPTA DKPNTNDKNL WLEQIRNKTF DLKPVGSAIP TSMRAPARAS
2201: SGNLRVAAII EKANAIRQAV GSDDEDDDNW SDT
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.