Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G014100.2 | Barley | cytosol | 8.05 | 95.77 |
| HORVU2Hr1G126350.1 | Barley | cytosol | 2.8 | 94.03 |
| TraesCS5D01G484800.1 | Wheat | nucleus | 89.68 | 90.33 |
| TraesCS5B01G484800.1 | Wheat | nucleus | 89.2 | 89.79 |
| Os03t0816900-01 | Rice | golgi | 20.99 | 40.87 |
| GSMUA_Achr5P29540_001 | Banana | cytosol | 6.98 | 37.47 |
| EER93209 | Sorghum | cytosol | 31.39 | 33.49 |
| Zm00001d034616_P001 | Maize | cytosol | 30.72 | 32.27 |
| GSMUA_Achr5P14370_001 | Banana | cytosol | 9.2 | 24.41 |
| TraesCS2A01G090500.1 | Wheat | nucleus | 3.91 | 21.73 |
| TraesCS3A01G134300.3 | Wheat | cytosol | 10.05 | 17.61 |
| TraesCS4A01G115200.1 | Wheat | nucleus | 9.92 | 16.98 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G472100.1 | EnsemblPlantsGene:TraesCS5A01G472100 | Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030036 |
| InterPro:SCAR/WAVE_fam | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 | SEG:seg | MapMan:20.2.2.2.4 | : |
Description
No Description!
Coordinates
chr5A:+:649237228..649246541
Molecular Weight (calculated)
245484.0 Da
IEP (calculated)
4.101
GRAVY (calculated)
-0.646
Length
2249 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIRYQVRNEY GLADPALYAP EEEEEDDPEA LLEGVAMAGL VGLLRQLGDL AEFAAEIFHD LHEDVMATAS RGHGLMLRLQ QLEAEFPAVE KAIIAQTDHS
0101: NYLHDNGIEW HPNLQLNQNL ITIGDMPRFI LDSYEECRGP PHLFTLDKFD VAGAGASLKR YSDPSFFKMG QTSNMIEPDY LREKKPRRIK KKAMRRKGET
0201: LESLLIANSE SQITSSKDRS SRKVPPRTTK LKSRHLRDSY NKTISRICRE QLQEVISSQQ KILSNCSARN FHAKFRSTDS SEIISSFGEL DNFSAPAQSF
0301: TKHELTKVVP VDESDTLVTA SAPINGPIHL EVDDGQYLAT QQEHFEMEQI CKGSPLQSVQ EEKLQLAVVP VYHDDDPCRP DDIGSDQDKF IDTLNIESEG
0401: EADHSMKSQK NLSAEMEVDN LNCDGKEAES VLDVQFSEPG PVEDLSSGLS NPCNDTEPTR ADSFLLSDSS PSAVSDTKDT DSDSDSCKQV GADNWINDKE
0501: SCNDVDLMDV SSSSSVTSDD NGNFETDTNL NGCVQNQEAS FLPTNDYHAV AIPSSEKQLS QTSSGLDGLA SISSNYHEIA YRSAEDGRNN VVDGTSTISG
0601: QPNDVSHAVG EVEVPHADDL LLQSGTHNQE QIQLSKKPFE ECTSIATVVQ ETDTKVASLP DMDPVVHMND LEFNNVALPA EIDTSTKPTS LDPDVTHKHS
0701: DKLDSGVIPI HSITSDNPSF ESDQGELVEE SHCLPDEDLY KHITEDQEIA ALEKGPCSVR LDTHKEDSMQ ASVVPMHFSN IQVIPGLAES VPTFQDDTEA
0801: HTSKMLEQSP RVLNDDTKSS LVDVPSASST APILDTVKSC MEYHESIETI KNVEHSEVLV DAEVVEESTT GRFDDDRIPS EEEHTDGVKH TEKAEVDAEV
0901: VEELTTGRFD DDMIPSEDEH TDGAKQTEKA EVLPTNSSHD IPLQSSPFRE DIEAVEAICE NLGSLEESRG HIFRESMLQK ENTQELLLQT ANLPHPIEIE
1001: TSGGTLGGSD DILYVPPSHF PEDSSCQEDL SEETTLIAEE VPCQSDLDKD VTVSPNSNMV WEQLSDVDQD LVRELSAQDS FGTNPFVDPG YMVSSTDPLP
1101: SMIYQPCCSE EEDDFLSELL IQQCKIEAKA NLYPLDDSLW EPATPPDEAP LPSEVMTEQD FRSLCHEYHE IDFTAAAEGF DHKPSSDTKD ITNASVVSVL
1201: DFPSSVSVLP VELDQEAVCS KPDSQRADCS SARDISGETF VPLSAIEVPD AEKQAADSDL RSHESFGDEK NLELDILSVP VKSEQEQRPL PEVVPVKEEQ
1301: DPCANLPPHA FINENVGSGT VGARGLDEPD VLPLRKPTPT HESDSCVFDG PNSQSVPSSS MDKTVDDLDV PPPRIALEAE ESEDQFTGEN DSQIGTSHVC
1401: EKIEEPAAPP SNAVLVEKEA EVCAPSELDS QIASCSLRNK KIDELDCPPL SGSALIEDES EDHISGVPDS QIAPYSPVND KIVGPGASTS VNDREAGWET
1501: CPSPELDPQF APCPLSDYNV GKLDVTPSCN VQVEAENGPY HSPEFGTRIA PYSSVNDKID VPGAATSIHD MEVEQGWEAC ASPELDSQIA PCPVSEDRVG
1601: ELDGSSSCNV LVETENGPYH SPEFGTQVAP YSSVNDKIDV PGAATSIHDM EVEQGWEACA SPELDSQTAP CPMGEDKVGE LDVASSCNVQ VEPENASYCS
1701: PESDSQIAPG SLNSSALAER STAASTSVMH STEENYRVSP VPPHTEPFQS VCSEDPPKLP PLPPLQWRLG RPRLGLLSTK DRAPDPASRT TSILPVSSQN
1801: MDNGLVSLDG MAEPIALVSS QDIKERHQNS VVDNSDQRVE SGMPRENDRP FSEACWNIKH QGHIISSPSE AEEHLNDSGA TAHVINQQDC QQHLLCSDIS
1901: DIAKHLSSTD PAASEDDKMV DDHSAARSVH FHKVSSSTPG HVSENGSCQQ SQHGESLSGT SDNEEHSSNS SDEEKNLKDQ PITRGLPLDT TKHTASGSVL
2001: EEGNSQESQL QEQDADNLKG GPSEGQSHTA ESMVSEDYPH GDHNLDTESI LQPNPSWPSN ISKYLGDLDE GGYAHVEQPP VMGWTVGPQM LHPNYGISTE
2101: GSRFEPEVTD YRLTRKPVSV RNIPRNPLVD AVAAHDRSTM RKVSELAPPT DKPNTDDKNL WLEQIRNKVG ELAPTADKPN TNDKNLWLEQ IRNKTFDLKP
2201: VGSAKPTSMI APARASSGNL RVAAIIEKAN AIRQAVGSDD EDDDNWSDT
0101: NYLHDNGIEW HPNLQLNQNL ITIGDMPRFI LDSYEECRGP PHLFTLDKFD VAGAGASLKR YSDPSFFKMG QTSNMIEPDY LREKKPRRIK KKAMRRKGET
0201: LESLLIANSE SQITSSKDRS SRKVPPRTTK LKSRHLRDSY NKTISRICRE QLQEVISSQQ KILSNCSARN FHAKFRSTDS SEIISSFGEL DNFSAPAQSF
0301: TKHELTKVVP VDESDTLVTA SAPINGPIHL EVDDGQYLAT QQEHFEMEQI CKGSPLQSVQ EEKLQLAVVP VYHDDDPCRP DDIGSDQDKF IDTLNIESEG
0401: EADHSMKSQK NLSAEMEVDN LNCDGKEAES VLDVQFSEPG PVEDLSSGLS NPCNDTEPTR ADSFLLSDSS PSAVSDTKDT DSDSDSCKQV GADNWINDKE
0501: SCNDVDLMDV SSSSSVTSDD NGNFETDTNL NGCVQNQEAS FLPTNDYHAV AIPSSEKQLS QTSSGLDGLA SISSNYHEIA YRSAEDGRNN VVDGTSTISG
0601: QPNDVSHAVG EVEVPHADDL LLQSGTHNQE QIQLSKKPFE ECTSIATVVQ ETDTKVASLP DMDPVVHMND LEFNNVALPA EIDTSTKPTS LDPDVTHKHS
0701: DKLDSGVIPI HSITSDNPSF ESDQGELVEE SHCLPDEDLY KHITEDQEIA ALEKGPCSVR LDTHKEDSMQ ASVVPMHFSN IQVIPGLAES VPTFQDDTEA
0801: HTSKMLEQSP RVLNDDTKSS LVDVPSASST APILDTVKSC MEYHESIETI KNVEHSEVLV DAEVVEESTT GRFDDDRIPS EEEHTDGVKH TEKAEVDAEV
0901: VEELTTGRFD DDMIPSEDEH TDGAKQTEKA EVLPTNSSHD IPLQSSPFRE DIEAVEAICE NLGSLEESRG HIFRESMLQK ENTQELLLQT ANLPHPIEIE
1001: TSGGTLGGSD DILYVPPSHF PEDSSCQEDL SEETTLIAEE VPCQSDLDKD VTVSPNSNMV WEQLSDVDQD LVRELSAQDS FGTNPFVDPG YMVSSTDPLP
1101: SMIYQPCCSE EEDDFLSELL IQQCKIEAKA NLYPLDDSLW EPATPPDEAP LPSEVMTEQD FRSLCHEYHE IDFTAAAEGF DHKPSSDTKD ITNASVVSVL
1201: DFPSSVSVLP VELDQEAVCS KPDSQRADCS SARDISGETF VPLSAIEVPD AEKQAADSDL RSHESFGDEK NLELDILSVP VKSEQEQRPL PEVVPVKEEQ
1301: DPCANLPPHA FINENVGSGT VGARGLDEPD VLPLRKPTPT HESDSCVFDG PNSQSVPSSS MDKTVDDLDV PPPRIALEAE ESEDQFTGEN DSQIGTSHVC
1401: EKIEEPAAPP SNAVLVEKEA EVCAPSELDS QIASCSLRNK KIDELDCPPL SGSALIEDES EDHISGVPDS QIAPYSPVND KIVGPGASTS VNDREAGWET
1501: CPSPELDPQF APCPLSDYNV GKLDVTPSCN VQVEAENGPY HSPEFGTRIA PYSSVNDKID VPGAATSIHD MEVEQGWEAC ASPELDSQIA PCPVSEDRVG
1601: ELDGSSSCNV LVETENGPYH SPEFGTQVAP YSSVNDKIDV PGAATSIHDM EVEQGWEACA SPELDSQTAP CPMGEDKVGE LDVASSCNVQ VEPENASYCS
1701: PESDSQIAPG SLNSSALAER STAASTSVMH STEENYRVSP VPPHTEPFQS VCSEDPPKLP PLPPLQWRLG RPRLGLLSTK DRAPDPASRT TSILPVSSQN
1801: MDNGLVSLDG MAEPIALVSS QDIKERHQNS VVDNSDQRVE SGMPRENDRP FSEACWNIKH QGHIISSPSE AEEHLNDSGA TAHVINQQDC QQHLLCSDIS
1901: DIAKHLSSTD PAASEDDKMV DDHSAARSVH FHKVSSSTPG HVSENGSCQQ SQHGESLSGT SDNEEHSSNS SDEEKNLKDQ PITRGLPLDT TKHTASGSVL
2001: EEGNSQESQL QEQDADNLKG GPSEGQSHTA ESMVSEDYPH GDHNLDTESI LQPNPSWPSN ISKYLGDLDE GGYAHVEQPP VMGWTVGPQM LHPNYGISTE
2101: GSRFEPEVTD YRLTRKPVSV RNIPRNPLVD AVAAHDRSTM RKVSELAPPT DKPNTDDKNL WLEQIRNKVG ELAPTADKPN TNDKNLWLEQ IRNKTFDLKP
2201: VGSAKPTSMI APARASSGNL RVAAIIEKAN AIRQAVGSDD EDDDNWSDT
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.