Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G042610.1 | Barley | cytosol | 2.57 | 82.09 |
| HORVU2Hr1G126350.1 | Barley | cytosol | 2.57 | 82.09 |
| EER93209 | Sorghum | cytosol | 73.61 | 74.76 |
| HORVU0Hr1G014100.2 | Barley | cytosol | 6.49 | 73.55 |
| Os03t0816900-01 | Rice | golgi | 19.38 | 35.93 |
| GSMUA_Achr5P29540_001 | Banana | cytosol | 6.12 | 31.26 |
| TraesCS5D01G484800.1 | Wheat | nucleus | 32.41 | 31.08 |
| TraesCS5B01G484800.1 | Wheat | nucleus | 32.09 | 30.75 |
| TraesCS5A01G472100.1 | Wheat | nucleus | 32.27 | 30.72 |
| Zm00001d032131_P001 | Maize | cytosol, extracellular, plastid | 1.96 | 29.17 |
| HORVU0Hr1G014110.1 | Barley | cytosol, nucleus, plastid | 27.37 | 28.43 |
| Zm00001d025836_P001 | Maize | cytosol | 1.54 | 26.4 |
| Zm00001d025835_P001 | Maize | cytosol | 1.54 | 26.4 |
| GSMUA_Achr5P14370_001 | Banana | cytosol | 7.94 | 20.05 |
| Zm00001d008906_P003 | Maize | cytosol | 9.67 | 14.84 |
| Zm00001d047701_P002 | Maize | nucleus | 8.78 | 14.6 |
| Zm00001d028803_P002 | Maize | nucleus | 7.94 | 14.25 |
| Zm00001d022570_P001 | Maize | cytosol | 4.16 | 13.82 |
| Zm00001d013353_P001 | Maize | nucleus | 1.96 | 10.22 |
| Zm00001d027498_P001 | Maize | mitochondrion | 1.31 | 10.22 |
Protein Annotations
| Gene3D:1.20.5.340 | MapMan:20.2.2.2.4 | UniProt:A0A1D6L9A9 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030036 | InterPro:IPR003124 | ProteinID:ONM10778.1 | PFscan:PS51082 |
| PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 | InterPro:SCAR/WAVE_fam | UniParc:UPI000842D87E | InterPro:WH2_dom | EnsemblPlantsGene:Zm00001d034616 |
| EnsemblPlants:Zm00001d034616_P001 | EnsemblPlants:Zm00001d034616_T001 | SEG:seg | : | : | : |
Description
Protein SCAR2
Coordinates
chr1:+:297863276..297876107
Molecular Weight (calculated)
235210.0 Da
IEP (calculated)
4.295
GRAVY (calculated)
-0.612
Length
2141 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIRHQIRNEY GLADPEVYAA PGEEDDPEAL LEGVAMAGLV GVLRQLGDLA EFAAEIFHDL HEEAMATASR GHGLMLRLQQ LEAEFPAVEK AIISQTEHSN
0101: YPHDDGAEWH SNVQLKQNVI TQGDMPRFIM DSYEECRGLF FRFDVAGAGA SLKRYSDPSF FKTEHASNMI EADVLIENKP RRIKKKAMRW RKGATLESLL
0201: TANSESQITP KDRTSRKVPP RTTKLKSRQP RSPDHKTTSR ILREHLQEVI LSQKKIISRY SVRHYYVKFG SPDSSETAPP FGEMDSFGAL VQSSGKLDLT
0301: KVVPVNESDA VDTKSEPIDG SAYLELGDKR NLGKQHEPFQ QNGMVHSSEK LPDCPYLDIG ESNNRSHLTC EEKPRLAEVP ADQKDVDGRR PDDIVSDQDN
0401: FIGASNDTDM ENKEGLQMKT ECDPSASVEL VELNRHNKEG DKVLYAEPPE VGPAIDSSLG LDNASSGEEP TCVDLPLSSD SAPTVSATNG PNSGSQSGRQ
0501: MNGVDWSTDE ESSNDVDLID VSSSSSVVSE NGDVQNNDCL VSCLQHEEAI HSLSDDHAGA IHNSDEQSPN TSSNWDDMAI GCNNYTEKVH HPVEHVQDVV
0601: LDDISMILSK PNDVSEDEDK ISSGNADDLS LHPTKLNQEE IQELKTESEE GRSLESGSSP SKASLPNKDH VSMNDVEADT VTIPKETVAD TAPTGLDPDG
0701: IDERQDGVAP KYSSIHNSVL YESYDDKIAE DTHSLLDDGL STTFDDDKHV AEDHQFVVLE QRTCPTSLNT CKDDSMQGCA VARDFTDAEK LPGVVSGVLA
0801: SQLETESHVG ETLASTSYAF SDDTEALEIG VPLAPGTSFL PNTSSSLVEK HELTETEEIA EVGEFVVAKE STTSVFAVDV VPPKEFIDAN IHPEKVEVLA
0901: TSLTEEATRL DLQLQSPSRE VLETTEAIHR NFGAVDESRE DISKKSMLQT DNSPLIVETT SEKCSDRDGD TQFLVKSDYQ EELLKEGSHN AEDRSLCDLN
1001: KDGAVTLKSN AVEKQPVNAG QDLAWGMHAQ DSSSTNPFLD PAYLMSHTQI YSSSSMSSQP CFPEEEDFLS ELVIQHDNMG VTADALWEPA TPPDDAPLPS
1101: EIMTEDDFRS FCQEYHEIDF SSVTNCSHSE PASDSNKIPN AFLIRESDFP CYNSALPVKL DQEACIHSKF CSECVEYSCA VERQGTTSMV VSGKEDRVGK
1201: DETPGVDFHL NFLEFSNDNR SPELNMLSVP VDLRQELHGL PEVDSRDSSP LLHKEKTSEE CCFSLSNNVV EVKQELEIRA DLVPHSSINE KVDGLDEAVP
1301: VEPEAHACAL DEYDNQDVPH ISTSEKNETL TLGKPVLVQG PEVCAFGGFE CDPPIIPSPS VDETKDNLEV RMNMILQSFH HSLRTSFQAE QKSECYTSGE
1401: HDSQTVPFPL HDENINELDD PPLSNADELD RESKACVPHE CDAQIAPCST DEDIHELDHP PLSSPALVDL ESEDHVSDDR DSEVTPCLVK DKIDESVDAQ
1501: PNLLPGELEQ ETHAPPELDF RVAPQSAKES DCSTEFDSQA APCSSNIPVL ANTTVSTCIS AMPSSEETYQ LSPVPPPTVQ FQNDSYKDPQ ALLADSYKDP
1601: QAPPPLPPLQ WRLGKPRLGL LSRKGCMTEP ARVIDPVLQI SSQEMDIRPG LLDPTDRSIE PVSCQEIKED RCESSLIDHN DQNVDFDRLS TRVAVTDVAR
1701: TEHRLSLETS EDIKQQGHIS SSATGVGEHL DAGFTSTMAD EEHLDDSGMT HGTALYLSDP LFPLPTYELQ DPQPDTRENS EHPSQTHGAA SGDDKSMDAV
1801: GSMESTLTKG HVSGNRCYQQ PQHGESSSET SDHKEHITNA SEDGVKHQSG TSEAPSDTAK HSAPGTLLKG NVQESQILQE HNVGSSEDDQ PGGLLYSLEP
1901: VAPQGENKNQ VNNPGLLLEW PGDTSELVTG LEKSCYAHAE QPPVMGWTVG PQMLHPKYGI LEEESQFEPN IADNHLIRKP ISIKNIPRNP LVDAVAAHDR
2001: SSMRKVSELA PPTDKPKPNE RNMLLEQIRN KTFSLKPVAP AQQTAMRSPA RTSTRNLKVA AIIEKANAIR QVVSLQWEVT TKTQIVGVIH KSPTVCPTLL
2101: VLLSMAERYR FIKSIGDRMG MHNHVIVFVC PTLLVLLSMA E
0101: YPHDDGAEWH SNVQLKQNVI TQGDMPRFIM DSYEECRGLF FRFDVAGAGA SLKRYSDPSF FKTEHASNMI EADVLIENKP RRIKKKAMRW RKGATLESLL
0201: TANSESQITP KDRTSRKVPP RTTKLKSRQP RSPDHKTTSR ILREHLQEVI LSQKKIISRY SVRHYYVKFG SPDSSETAPP FGEMDSFGAL VQSSGKLDLT
0301: KVVPVNESDA VDTKSEPIDG SAYLELGDKR NLGKQHEPFQ QNGMVHSSEK LPDCPYLDIG ESNNRSHLTC EEKPRLAEVP ADQKDVDGRR PDDIVSDQDN
0401: FIGASNDTDM ENKEGLQMKT ECDPSASVEL VELNRHNKEG DKVLYAEPPE VGPAIDSSLG LDNASSGEEP TCVDLPLSSD SAPTVSATNG PNSGSQSGRQ
0501: MNGVDWSTDE ESSNDVDLID VSSSSSVVSE NGDVQNNDCL VSCLQHEEAI HSLSDDHAGA IHNSDEQSPN TSSNWDDMAI GCNNYTEKVH HPVEHVQDVV
0601: LDDISMILSK PNDVSEDEDK ISSGNADDLS LHPTKLNQEE IQELKTESEE GRSLESGSSP SKASLPNKDH VSMNDVEADT VTIPKETVAD TAPTGLDPDG
0701: IDERQDGVAP KYSSIHNSVL YESYDDKIAE DTHSLLDDGL STTFDDDKHV AEDHQFVVLE QRTCPTSLNT CKDDSMQGCA VARDFTDAEK LPGVVSGVLA
0801: SQLETESHVG ETLASTSYAF SDDTEALEIG VPLAPGTSFL PNTSSSLVEK HELTETEEIA EVGEFVVAKE STTSVFAVDV VPPKEFIDAN IHPEKVEVLA
0901: TSLTEEATRL DLQLQSPSRE VLETTEAIHR NFGAVDESRE DISKKSMLQT DNSPLIVETT SEKCSDRDGD TQFLVKSDYQ EELLKEGSHN AEDRSLCDLN
1001: KDGAVTLKSN AVEKQPVNAG QDLAWGMHAQ DSSSTNPFLD PAYLMSHTQI YSSSSMSSQP CFPEEEDFLS ELVIQHDNMG VTADALWEPA TPPDDAPLPS
1101: EIMTEDDFRS FCQEYHEIDF SSVTNCSHSE PASDSNKIPN AFLIRESDFP CYNSALPVKL DQEACIHSKF CSECVEYSCA VERQGTTSMV VSGKEDRVGK
1201: DETPGVDFHL NFLEFSNDNR SPELNMLSVP VDLRQELHGL PEVDSRDSSP LLHKEKTSEE CCFSLSNNVV EVKQELEIRA DLVPHSSINE KVDGLDEAVP
1301: VEPEAHACAL DEYDNQDVPH ISTSEKNETL TLGKPVLVQG PEVCAFGGFE CDPPIIPSPS VDETKDNLEV RMNMILQSFH HSLRTSFQAE QKSECYTSGE
1401: HDSQTVPFPL HDENINELDD PPLSNADELD RESKACVPHE CDAQIAPCST DEDIHELDHP PLSSPALVDL ESEDHVSDDR DSEVTPCLVK DKIDESVDAQ
1501: PNLLPGELEQ ETHAPPELDF RVAPQSAKES DCSTEFDSQA APCSSNIPVL ANTTVSTCIS AMPSSEETYQ LSPVPPPTVQ FQNDSYKDPQ ALLADSYKDP
1601: QAPPPLPPLQ WRLGKPRLGL LSRKGCMTEP ARVIDPVLQI SSQEMDIRPG LLDPTDRSIE PVSCQEIKED RCESSLIDHN DQNVDFDRLS TRVAVTDVAR
1701: TEHRLSLETS EDIKQQGHIS SSATGVGEHL DAGFTSTMAD EEHLDDSGMT HGTALYLSDP LFPLPTYELQ DPQPDTRENS EHPSQTHGAA SGDDKSMDAV
1801: GSMESTLTKG HVSGNRCYQQ PQHGESSSET SDHKEHITNA SEDGVKHQSG TSEAPSDTAK HSAPGTLLKG NVQESQILQE HNVGSSEDDQ PGGLLYSLEP
1901: VAPQGENKNQ VNNPGLLLEW PGDTSELVTG LEKSCYAHAE QPPVMGWTVG PQMLHPKYGI LEEESQFEPN IADNHLIRKP ISIKNIPRNP LVDAVAAHDR
2001: SSMRKVSELA PPTDKPKPNE RNMLLEQIRN KTFSLKPVAP AQQTAMRSPA RTSTRNLKVA AIIEKANAIR QVVSLQWEVT TKTQIVGVIH KSPTVCPTLL
2101: VLLSMAERYR FIKSIGDRMG MHNHVIVFVC PTLLVLLSMA E
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.