Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G014100.2 | Barley | cytosol | 15.92 | 71.43 |
| HORVU2Hr1G126350.1 | Barley | cytosol | 5.42 | 68.66 |
| HORVU2Hr1G042610.1 | Barley | cytosol | 5.42 | 68.66 |
| GSMUA_Achr5P29540_001 | Banana | cytosol | 27.12 | 54.89 |
| Os03t0816900-01 | Rice | golgi | 23.0 | 16.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.4 | 15.14 |
| GSMUA_Achr9P04670_001 | Banana | cytosol | 21.93 | 14.89 |
| GSMUA_Achr2P15470_001 | Banana | nucleus | 18.87 | 14.68 |
| GSMUA_Achr10P... | Banana | cytosol | 19.46 | 13.89 |
| GSMUA_Achr5P29520_001 | Banana | cytosol | 2.71 | 12.78 |
| GSMUA_Achr6P32700_001 | Banana | cytosol | 21.34 | 12.28 |
| TraesCS5D01G484800.1 | Wheat | nucleus | 24.29 | 9.23 |
| TraesCS5A01G472100.1 | Wheat | nucleus | 24.41 | 9.2 |
| TraesCS5B01G484800.1 | Wheat | nucleus | 24.17 | 9.18 |
| EER93209 | Sorghum | cytosol | 20.99 | 8.44 |
| Zm00001d034616_P001 | Maize | cytosol | 20.05 | 7.94 |
| HORVU0Hr1G014110.1 | Barley | cytosol, nucleus, plastid | 8.61 | 3.54 |
| GSMUA_Achr5P14360_001 | Banana | cytosol, nucleus | 5.54 | 2.72 |
Protein Annotations
| Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | MapMan:20.2.2.2.4 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0030036 | EnsemblPlantsGene:GSMUA_Achr5G14370_001 | EnsemblPlants:GSMUA_Achr5P14370_001 | EnsemblPlants:GSMUA_Achr5T14370_001 | UniProt:M0SYG6 | PANTHER:PTHR12902 |
| PANTHER:PTHR12902:SF12 | InterPro:SCAR/WAVE_fam | TMHMM:TMhelix | UniParc:UPI0002964749 | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G14370_001]
Coordinates
chr5:-:10312057..10317257
Molecular Weight (calculated)
94104.6 Da
IEP (calculated)
4.412
GRAVY (calculated)
-0.519
Length
848 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTVRYQIRN EYGLADPELH RTADKDDPEA ILEGVAMAGL VGVLRQLGDL AEFAAEIFRD LHEEVMGTAA RGHGLMLRVQ QLEAELPSVE KAIFSQSSHS
101: NFAYNDGIDW HSSIQMDQNL ITQGDMPRFI LDSYEECRGP PRLFTLDKFD TAGAGACLKR YSDPSFFKME LVSSGLVETE IPREKKSRKM RKKGSNWKKG
201: QTLESLLSPL ADSTSQTTVS DQVSSKSATR LVRLRYRNSN NTNGSKGCNL RKCLLALHSD EQKVVLDNSR RHSSLNVNLV DSGELTSVMH DTVMDVSANY
301: PLVRDVSATE TPTKEVVKLT YKFDHWKTGT EEFSEALHGP LGDMQNPQRN FNFVENKEKF ADAENKSESS NCDGELSDTE KTTSVQVADH KLGDIEHILE
401: DSNNGYKTED GGSEQENFMD ALNSMEPEVE TDSENKDRPD LGVTQKEAYD MNFYTSETLD ELLTQFSKQD MAAVSIVSIG LNHNLKSGIS SNLCNLSETP
501: ATQEKEITSN SSANSEYLLG ETNDESCEEC LPHDEVANSF DMISDGASDI KSFDNPILRS EIGEEPCNSC DINSTSNLIS TGPQQGFETL QFVKAYHVGT
601: SADHEAQLGR DETIKCSDGS PHSNRSDPEI HQPPELVEEL VLEGITEMLD MPNRLSSSPA RTLPMEDHGN EGSPFITAPT EKETQDSMDQ GTKSFAFKND
701: TTASLGGRSI ITTAPHFDPD ISIIQHDVAL DINICQYPEE STIETSSDYL KGTDGVEYPE ESTVEISSEY VKGTDDVVQT MNGKFMCETD ICLFSSSAKH
801: KLIFHRLIVT LAFSLIFFLC YSIWQAHLLG VKMTLFLKTL ILRAILLS
101: NFAYNDGIDW HSSIQMDQNL ITQGDMPRFI LDSYEECRGP PRLFTLDKFD TAGAGACLKR YSDPSFFKME LVSSGLVETE IPREKKSRKM RKKGSNWKKG
201: QTLESLLSPL ADSTSQTTVS DQVSSKSATR LVRLRYRNSN NTNGSKGCNL RKCLLALHSD EQKVVLDNSR RHSSLNVNLV DSGELTSVMH DTVMDVSANY
301: PLVRDVSATE TPTKEVVKLT YKFDHWKTGT EEFSEALHGP LGDMQNPQRN FNFVENKEKF ADAENKSESS NCDGELSDTE KTTSVQVADH KLGDIEHILE
401: DSNNGYKTED GGSEQENFMD ALNSMEPEVE TDSENKDRPD LGVTQKEAYD MNFYTSETLD ELLTQFSKQD MAAVSIVSIG LNHNLKSGIS SNLCNLSETP
501: ATQEKEITSN SSANSEYLLG ETNDESCEEC LPHDEVANSF DMISDGASDI KSFDNPILRS EIGEEPCNSC DINSTSNLIS TGPQQGFETL QFVKAYHVGT
601: SADHEAQLGR DETIKCSDGS PHSNRSDPEI HQPPELVEEL VLEGITEMLD MPNRLSSSPA RTLPMEDHGN EGSPFITAPT EKETQDSMDQ GTKSFAFKND
701: TTASLGGRSI ITTAPHFDPD ISIIQHDVAL DINICQYPEE STIETSSDYL KGTDGVEYPE ESTVEISSEY VKGTDDVVQT MNGKFMCETD ICLFSSSAKH
801: KLIFHRLIVT LAFSLIFFLC YSIWQAHLLG VKMTLFLKTL ILRAILLS
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.