Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G042610.1 | Barley | cytosol | 2.66 | 83.58 |
| HORVU2Hr1G126350.1 | Barley | cytosol | 2.66 | 83.58 |
| HORVU0Hr1G014100.2 | Barley | cytosol | 6.88 | 76.72 |
| Zm00001d034616_P001 | Maize | cytosol | 74.76 | 73.61 |
| Os03t0816900-01 | Rice | golgi | 19.45 | 35.5 |
| GSMUA_Achr5P29540_001 | Banana | cytosol | 6.69 | 33.65 |
| TraesCS5D01G484800.1 | Wheat | nucleus | 33.87 | 31.97 |
| TraesCS5B01G484800.1 | Wheat | nucleus | 33.44 | 31.56 |
| TraesCS5A01G472100.1 | Wheat | nucleus | 33.49 | 31.39 |
| HORVU0Hr1G014110.1 | Barley | cytosol, nucleus, plastid | 28.08 | 28.72 |
| GSMUA_Achr5P14370_001 | Banana | cytosol | 8.44 | 20.99 |
| KXG31590 | Sorghum | cytosol | 11.1 | 17.06 |
| EER92402 | Sorghum | nucleus | 9.68 | 15.68 |
| KXG37022 | Sorghum | nucleus | 6.12 | 14.68 |
Protein Annotations
| Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | MapMan:20.2.2.2.4 | UniProt:C5WV54 | EnsemblPlants:EER93209 | ProteinID:EER93209 |
| ProteinID:EER93209.2 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0030036 | InterPro:IPR003124 | PFscan:PS51082 | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 | InterPro:SCAR/WAVE_fam |
| EnsemblPlantsGene:SORBI_3001G038800 | unigene:Sbi.15762 | UniParc:UPI00081ABDD1 | InterPro:WH2_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:2900104..2910005
Molecular Weight (calculated)
231311.0 Da
IEP (calculated)
4.206
GRAVY (calculated)
-0.708
Length
2108 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIRYQIRNEY GLADPEMYAG PGEGEEDDPE ALLEGVAMAG LVGMLRQLGD LAEFAAEIFH DLHEEVMATA SRGHGLMLRL QQLEAEFPAV EKAIISQTEH
0101: SNYPHDDGTE WHANLQLNQN VITQGDMPRF IMDSYEECRG PPQLFTLDKF DVAGAGASLK RYSDPSFFKT EHTSNMIETD VLIEKKPRRI KKKAMRWRKG
0201: ATLESLLTAN SEPHITPKDR TSRKVPPRTT KLKSRQPLTP DHKTTSRIWQ EHLQEVISSQ QKIISRYSAR HYHVKFRSTD SSETASPFGE MDNFGALQSS
0301: DKLDLTKVVP VNESDDVETK SEPTDGPAYL ELGDNRILGK QHEPFQQNGM VHGSEKVQDC PNLDVGESNN RSHLTYEEKP LLAGVPADQK DIDGRRADDI
0401: VSDQDNFIDA CNDMDLEDEE DPEMETECDP SASVELVELN RHNKEGENAL YAEPPEVVPA IDSSTELDDS SSGGEPTCMD LPLASDSAPT VSATNGPNSG
0501: SQSGRQLNGV DWPKDEEPSN DVDLMDVSSS SSVVSENGDA QNNEEAFHSL SDDHAAAIHN SDKQSPDTSS YLDDMAIGCN NYTDKARHPV EHVQDVVLDD
0601: ISMVLSKPND VSEDEDKISS GSADDLSLHP TKPNQEEMQE LKKEFDEGRS LESGSSPSKL ASLPDKDHVM WMNDVEVDNV TVPKETPSGL DPDGIHERQD
0701: GISPKHSSIH NNVLYESYDD EIAEDMHSLL DDGLSTTFSK HVAENHQIVV LEQRTCPTSL NTCKDDSMQA CAVARDFTDA QKLPGVISGV SASQEETESH
0801: VGETLAPTSC AFSDDTEALE IGVPLAPSTS FLPNTSSSFV DQHESTEMEE IPEVGEFAVA EESTTSGSFI EQHELTETEE IPEVGEFAVA EESTTSGFAN
0901: DVVPPKEFID SNIHPEKAEV LATNSTEEAT RLDLQLQSPS REDLETMEPI HRNLGAVDDS REDISKKSML QTDNNPPLIA GTTSEKCSGR DDGTQFLVES
1001: YYQEELLEEA GHNAEDLSLC DLNKDGAVTL QSNTVGKQPV DADQDLAWGM HAQDSSSTNP FLDPAYLMSH TQIYPSSSMN CQPYFPEEED FLSELLIQHD
1101: NMGVTADALW EPATPPDEAP LPSEIMTEDD FRSFCHEYHE IDFSSVTDCS HSQPASDSNK TPNAFLVRES DLPCYNSALP VKLDKEACVH SKFCSECVEC
1201: SCAVDAQGTT SMTVSGKEDL KDKGEKTGVD SHLKSPEFSN DNRSPELNML SVPVVIQQEL HGLSGVDSRS SSPLLHKEKT SEECFFPLRN DVEVKQELEI
1301: CADLVPHSSI NEKVDGLDVT VPVEPVVHAC ALDEYDNQDF PRRSTGEKNE ALPLGKPVLA QGPEVCAFGG FEFDPLIIPS HSVDETKDNL EVRMNMILQS
1401: FHHSLRTSFQ AEQKSECCTS GEHDSQIVPF PLHDEKIDEL DGPLLSNADE LDRGSKVCVP HGHDAQITPC STDEDIHELD HPPLSSSALV DLESEDHVSD
1501: DRDSKVAPCL VKDKIDESVD AQPNLLPGEL EQETHAPPKL DFQVAPQSVK ESDCSTEFDS QTAPCSSNIP VLADTTVLTC ISAMPSSDSE ETNQLSPGPP
1601: PTVQFQNDSY KDPQAPPPLP PLQWRLGKPR LGLLSRKGCM TEPASVIDPV LQVSSREMDI RLGLLDPTDR SIEPVPSQEI KEDKCESSSI DHNDQNVDFG
1701: RLSARVDVTD VARTEHRPSL EASEDIKQEG HISSSATGVD EHLDAGVTST TADEKHLDDS GMTDGTALYS PEPLFPLPAY ELQDPKPDTR ENSEYPCQTH
1801: GAASGDDKSM DAFGNMESTP AGHVSENRCY QQHQHGESSS KTSDHEEHIT NASEDGVKHQ SGTSEAPSDT AKHSAPGTLL KGNGQESQIL QEHNVGSSED
1901: DQPGGPLCSL ESMASQDYPH DEYNLERENR NQASNPGPLL ERPGDKSELV TGLDEGCYVH AEQPPVMGWT VGPQMLHPKY GVLVEESQFE SNIADNHLTR
2001: KPISIKNIPR NPLVDAVAAH DRSSMRKVSE LAPSTDKLKP NERNMLLEQI RSKTFSLKPV APAKPTAMRS PARTSTRNLK VAAIIEKANA IRQAVGSDDE
2101: DADSWSDT
0101: SNYPHDDGTE WHANLQLNQN VITQGDMPRF IMDSYEECRG PPQLFTLDKF DVAGAGASLK RYSDPSFFKT EHTSNMIETD VLIEKKPRRI KKKAMRWRKG
0201: ATLESLLTAN SEPHITPKDR TSRKVPPRTT KLKSRQPLTP DHKTTSRIWQ EHLQEVISSQ QKIISRYSAR HYHVKFRSTD SSETASPFGE MDNFGALQSS
0301: DKLDLTKVVP VNESDDVETK SEPTDGPAYL ELGDNRILGK QHEPFQQNGM VHGSEKVQDC PNLDVGESNN RSHLTYEEKP LLAGVPADQK DIDGRRADDI
0401: VSDQDNFIDA CNDMDLEDEE DPEMETECDP SASVELVELN RHNKEGENAL YAEPPEVVPA IDSSTELDDS SSGGEPTCMD LPLASDSAPT VSATNGPNSG
0501: SQSGRQLNGV DWPKDEEPSN DVDLMDVSSS SSVVSENGDA QNNEEAFHSL SDDHAAAIHN SDKQSPDTSS YLDDMAIGCN NYTDKARHPV EHVQDVVLDD
0601: ISMVLSKPND VSEDEDKISS GSADDLSLHP TKPNQEEMQE LKKEFDEGRS LESGSSPSKL ASLPDKDHVM WMNDVEVDNV TVPKETPSGL DPDGIHERQD
0701: GISPKHSSIH NNVLYESYDD EIAEDMHSLL DDGLSTTFSK HVAENHQIVV LEQRTCPTSL NTCKDDSMQA CAVARDFTDA QKLPGVISGV SASQEETESH
0801: VGETLAPTSC AFSDDTEALE IGVPLAPSTS FLPNTSSSFV DQHESTEMEE IPEVGEFAVA EESTTSGSFI EQHELTETEE IPEVGEFAVA EESTTSGFAN
0901: DVVPPKEFID SNIHPEKAEV LATNSTEEAT RLDLQLQSPS REDLETMEPI HRNLGAVDDS REDISKKSML QTDNNPPLIA GTTSEKCSGR DDGTQFLVES
1001: YYQEELLEEA GHNAEDLSLC DLNKDGAVTL QSNTVGKQPV DADQDLAWGM HAQDSSSTNP FLDPAYLMSH TQIYPSSSMN CQPYFPEEED FLSELLIQHD
1101: NMGVTADALW EPATPPDEAP LPSEIMTEDD FRSFCHEYHE IDFSSVTDCS HSQPASDSNK TPNAFLVRES DLPCYNSALP VKLDKEACVH SKFCSECVEC
1201: SCAVDAQGTT SMTVSGKEDL KDKGEKTGVD SHLKSPEFSN DNRSPELNML SVPVVIQQEL HGLSGVDSRS SSPLLHKEKT SEECFFPLRN DVEVKQELEI
1301: CADLVPHSSI NEKVDGLDVT VPVEPVVHAC ALDEYDNQDF PRRSTGEKNE ALPLGKPVLA QGPEVCAFGG FEFDPLIIPS HSVDETKDNL EVRMNMILQS
1401: FHHSLRTSFQ AEQKSECCTS GEHDSQIVPF PLHDEKIDEL DGPLLSNADE LDRGSKVCVP HGHDAQITPC STDEDIHELD HPPLSSSALV DLESEDHVSD
1501: DRDSKVAPCL VKDKIDESVD AQPNLLPGEL EQETHAPPKL DFQVAPQSVK ESDCSTEFDS QTAPCSSNIP VLADTTVLTC ISAMPSSDSE ETNQLSPGPP
1601: PTVQFQNDSY KDPQAPPPLP PLQWRLGKPR LGLLSRKGCM TEPASVIDPV LQVSSREMDI RLGLLDPTDR SIEPVPSQEI KEDKCESSSI DHNDQNVDFG
1701: RLSARVDVTD VARTEHRPSL EASEDIKQEG HISSSATGVD EHLDAGVTST TADEKHLDDS GMTDGTALYS PEPLFPLPAY ELQDPKPDTR ENSEYPCQTH
1801: GAASGDDKSM DAFGNMESTP AGHVSENRCY QQHQHGESSS KTSDHEEHIT NASEDGVKHQ SGTSEAPSDT AKHSAPGTLL KGNGQESQIL QEHNVGSSED
1901: DQPGGPLCSL ESMASQDYPH DEYNLERENR NQASNPGPLL ERPGDKSELV TGLDEGCYVH AEQPPVMGWT VGPQMLHPKY GVLVEESQFE SNIADNHLTR
2001: KPISIKNIPR NPLVDAVAAH DRSSMRKVSE LAPSTDKLKP NERNMLLEQI RSKTFSLKPV APAKPTAMRS PARTSTRNLK VAAIIEKANA IRQAVGSDDE
2101: DADSWSDT
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.