Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G014100.2 | Barley | cytosol | 8.15 | 96.3 |
| HORVU2Hr1G126350.1 | Barley | cytosol | 2.86 | 95.52 |
| TraesCS5D01G484800.1 | Wheat | nucleus | 94.4 | 94.45 |
| TraesCS5A01G472100.1 | Wheat | nucleus | 89.79 | 89.2 |
| Os03t0816900-01 | Rice | golgi | 21.08 | 40.78 |
| GSMUA_Achr5P29540_001 | Banana | cytosol | 7.12 | 37.95 |
| EER93209 | Sorghum | cytosol | 31.56 | 33.44 |
| Zm00001d034616_P001 | Maize | cytosol | 30.75 | 32.09 |
| GSMUA_Achr5P14370_001 | Banana | cytosol | 9.18 | 24.17 |
| TraesCS2B01G106000.1 | Wheat | cytosol | 3.8 | 23.22 |
| TraesCS3B01G168100.1 | Wheat | cytosol | 10.56 | 18.38 |
| TraesCS4B01G189000.1 | Wheat | nucleus | 6.45 | 12.28 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G484800.1 | EnsemblPlantsGene:TraesCS5B01G484800 | Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030036 |
| InterPro:SCAR/WAVE_fam | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 | SEG:seg | MapMan:20.2.2.2.4 | : |
Description
No Description!
Coordinates
chr5B:+:656251427..656260704
Molecular Weight (calculated)
243967.0 Da
IEP (calculated)
4.101
GRAVY (calculated)
-0.653
Length
2234 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIRYQVRNEY GLADPALYAP EEEDDPEALL EGVAMAGLVG LLRQLGDLAE FAAEIFHDLH EDVMATASRG HGLMLRLQQL EAEFPAVEKA IIAQTDHSTY
0101: LHDDGIEWHS NLQLNQNLIT IGDMPRFILD SYEECRGPPH LFTLDKFDVA GAGASLKRYS DPSFFKMGQT SNMIELDYLR EKKPRRIKKK AMRRKGETLE
0201: SLLIANSESQ ITSSKDRSSR KVPPRTTKLK SRHLRDSYNK TISRICREQL QEVISSQQKI LSNYSARNFH AKFRSTDSSE IISSFGELDN FSAPAQSFTK
0301: HELTKVVPVD ESDTLVTASA PINGPIHLEV DDGQFLATQQ EHFEMEQICK GCPLQLVQEE KLQLAVVPVY HDNDPCRPDD IGSDQDKFID TLNTESEGEA
0401: DHSMKSQKNL SAEMEVDNLN CDGKEAESVL DVQFSELGPA EDQSSGLSNP CNDTEPTRAD SFLLSDSSPS AVSDTKDTDS DSDSCKQLSG DNWINDKESC
0501: NDVDLMDVSS SSSVTSDDNG NFETDTNLNG CVQNQEVSFL PSNDYHAGAI PSSEKQLSQT SSGLDGLASI SSDYHEIAYR SAEDGQNNVV YGTSTISGQP
0601: NDVSHAGGEV EVPHADDLLL QSSTHNQEQI QSSKEPFEEC TSLATVVQET DTKVASLPDM DPVVHMNDLE FNNVALPAEI DTSTTQTSLD PDVTHKHSDR
0701: LDSGVIPIHS ITSDNPSYES DHGELVEELH CLPDEDLYKH ITEDQEIAAL EKGPCSVRLD THKEDSMQAS VVPMHFSSIQ AIPGLAESVP TFQDDTEAHT
0801: SKMLEQSPRV LNDDTKSSLI DVPSASSTAP ILDTIKSCME YHESIETVKN VEHSEVLVDA EVVEESTTSR LDDDMIPSEE EHTDGAKHTE KAEVDAEVVE
0901: ESTTGRFNDD MTPSEEEHTD GAKHTEKAEV LPTNSSHDIP LQSSPFREDI EAVEATCENL GSLEDSRGHI FRESMLQTAN LPQPIEIETS GGTLGGSDDI
1001: LYVPRSHFPE DSCQEELPEE TTLVAEEVPC QSDLDKDVTV SPNSNMVWEQ LSDVDQDLVR ELSGQDSFGT NPFVDPGYMV SSTDPLPSMS YQPCCSEEED
1101: DFLSELLIQQ CNIQAKENLY PLDDSLWEPA TPPDEAPLPS EVMIEQDFRS LCHEYHEIDF TADTKGFDYK PSSDSNDIAN DCVVSVSDSP SSVSVLSAEL
1201: DQEVVCSKPD SQLAECSSAR DITGETTVPL SAMKVPDGEK QAVDSDLRSH ESFGDEKNLE LDIFSIPVKS EQEQRPLPEV VPLKEEQDPC ANLPPHAFIN
1301: EKVGELDAHS SNLPVEPLVG ARGLDELDVL PLRKPIPTQE SDSRVLDGPN SQSVPSSSTD KAVDDLDVPP LRIALEAEES EDQFTGENDS QIATSYVCEK
1401: TEEPAGPPSN AVVEKEAEVC APSELDSQIA SCSLPNKKID ELDCPPLSGS ALIENESEDH ISGVPDSQIA PYSSVNDKIV GPGASTSVND TEAGWETCPS
1501: PELDPQFAPC PLSDYNVGRL DGTPSRNVQV EAHNGPYYSP EFDTRIAPYS SVNDKIDVPG AATSVHDMEV EQGWEACASP ELDSQIATCP VSEDRVGQLD
1601: GSSSCNVQVE AAQIAPYSSV NDRIDVPGAS TSIHDMEVEQ GWEVCASPEL DFQTAPCPMS EDRVGQLDGS SSCNVQVEAE NASYCSPESD SRIAPGSLNS
1701: SALAERSTVA FTSGMHSTKE IDRVLPVPPH PEPFQSVCSE DPQKLPPLPP LQWRLGRPRL GLLSKKDRVP ESASSTTSIL PVSSQDMDNG LVSLDRMAEP
1801: IASVSSQDIK ERYQNSVVDN SDQRVESGLP GEHDRPFSEA CGNIKHQGHI TSSPSEAEEH LNDSGATAHV INQQDRQQHL LCSDISDIPE HLSSTDPAAS
1901: EDDKTVDDHN AARNVHFHKV SSSTPGHVSK NGSCQQSQHG ESLSGTPDNE EHSSNASDEE KNLKDQSITR GLPLDTTKHT ASGSVLEEGT QESQLPEQDA
2001: DNLKGGLSEG QSHTAESMVS EDYPHGDHNL DTESILQPNP SWPSNISKYL GDFDEGGYAH AEQPPVMGWT VGPQMLHPNY GISTEGSRFE PEVTDYRLTR
2101: KPVSVRNIPR NPLVDAVAAH DRSTMRKVSE LAPATDKPNT NDKNLWLEQI RNKVGELAPT ADKPNANDKN LWLEQIRNKT FDLKPVGSAI PTSIRAPARA
2201: SSGNLRVAAI IEKANAIRQA VGSDDEDDDN WSDT
0101: LHDDGIEWHS NLQLNQNLIT IGDMPRFILD SYEECRGPPH LFTLDKFDVA GAGASLKRYS DPSFFKMGQT SNMIELDYLR EKKPRRIKKK AMRRKGETLE
0201: SLLIANSESQ ITSSKDRSSR KVPPRTTKLK SRHLRDSYNK TISRICREQL QEVISSQQKI LSNYSARNFH AKFRSTDSSE IISSFGELDN FSAPAQSFTK
0301: HELTKVVPVD ESDTLVTASA PINGPIHLEV DDGQFLATQQ EHFEMEQICK GCPLQLVQEE KLQLAVVPVY HDNDPCRPDD IGSDQDKFID TLNTESEGEA
0401: DHSMKSQKNL SAEMEVDNLN CDGKEAESVL DVQFSELGPA EDQSSGLSNP CNDTEPTRAD SFLLSDSSPS AVSDTKDTDS DSDSCKQLSG DNWINDKESC
0501: NDVDLMDVSS SSSVTSDDNG NFETDTNLNG CVQNQEVSFL PSNDYHAGAI PSSEKQLSQT SSGLDGLASI SSDYHEIAYR SAEDGQNNVV YGTSTISGQP
0601: NDVSHAGGEV EVPHADDLLL QSSTHNQEQI QSSKEPFEEC TSLATVVQET DTKVASLPDM DPVVHMNDLE FNNVALPAEI DTSTTQTSLD PDVTHKHSDR
0701: LDSGVIPIHS ITSDNPSYES DHGELVEELH CLPDEDLYKH ITEDQEIAAL EKGPCSVRLD THKEDSMQAS VVPMHFSSIQ AIPGLAESVP TFQDDTEAHT
0801: SKMLEQSPRV LNDDTKSSLI DVPSASSTAP ILDTIKSCME YHESIETVKN VEHSEVLVDA EVVEESTTSR LDDDMIPSEE EHTDGAKHTE KAEVDAEVVE
0901: ESTTGRFNDD MTPSEEEHTD GAKHTEKAEV LPTNSSHDIP LQSSPFREDI EAVEATCENL GSLEDSRGHI FRESMLQTAN LPQPIEIETS GGTLGGSDDI
1001: LYVPRSHFPE DSCQEELPEE TTLVAEEVPC QSDLDKDVTV SPNSNMVWEQ LSDVDQDLVR ELSGQDSFGT NPFVDPGYMV SSTDPLPSMS YQPCCSEEED
1101: DFLSELLIQQ CNIQAKENLY PLDDSLWEPA TPPDEAPLPS EVMIEQDFRS LCHEYHEIDF TADTKGFDYK PSSDSNDIAN DCVVSVSDSP SSVSVLSAEL
1201: DQEVVCSKPD SQLAECSSAR DITGETTVPL SAMKVPDGEK QAVDSDLRSH ESFGDEKNLE LDIFSIPVKS EQEQRPLPEV VPLKEEQDPC ANLPPHAFIN
1301: EKVGELDAHS SNLPVEPLVG ARGLDELDVL PLRKPIPTQE SDSRVLDGPN SQSVPSSSTD KAVDDLDVPP LRIALEAEES EDQFTGENDS QIATSYVCEK
1401: TEEPAGPPSN AVVEKEAEVC APSELDSQIA SCSLPNKKID ELDCPPLSGS ALIENESEDH ISGVPDSQIA PYSSVNDKIV GPGASTSVND TEAGWETCPS
1501: PELDPQFAPC PLSDYNVGRL DGTPSRNVQV EAHNGPYYSP EFDTRIAPYS SVNDKIDVPG AATSVHDMEV EQGWEACASP ELDSQIATCP VSEDRVGQLD
1601: GSSSCNVQVE AAQIAPYSSV NDRIDVPGAS TSIHDMEVEQ GWEVCASPEL DFQTAPCPMS EDRVGQLDGS SSCNVQVEAE NASYCSPESD SRIAPGSLNS
1701: SALAERSTVA FTSGMHSTKE IDRVLPVPPH PEPFQSVCSE DPQKLPPLPP LQWRLGRPRL GLLSKKDRVP ESASSTTSIL PVSSQDMDNG LVSLDRMAEP
1801: IASVSSQDIK ERYQNSVVDN SDQRVESGLP GEHDRPFSEA CGNIKHQGHI TSSPSEAEEH LNDSGATAHV INQQDRQQHL LCSDISDIPE HLSSTDPAAS
1901: EDDKTVDDHN AARNVHFHKV SSSTPGHVSK NGSCQQSQHG ESLSGTPDNE EHSSNASDEE KNLKDQSITR GLPLDTTKHT ASGSVLEEGT QESQLPEQDA
2001: DNLKGGLSEG QSHTAESMVS EDYPHGDHNL DTESILQPNP SWPSNISKYL GDFDEGGYAH AEQPPVMGWT VGPQMLHPNY GISTEGSRFE PEVTDYRLTR
2101: KPVSVRNIPR NPLVDAVAAH DRSTMRKVSE LAPATDKPNT NDKNLWLEQI RNKVGELAPT ADKPNANDKN LWLEQIRNKT FDLKPVGSAI PTSIRAPARA
2201: SSGNLRVAAI IEKANAIRQA VGSDDEDDDN WSDT
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.