Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P29520_001 | Banana | cytosol | 3.47 | 33.33 |
| Os03t0817000-01 | Rice | cytosol | 3.24 | 12.64 |
| HORVU2Hr1G014860.1 | Barley | cytosol | 1.62 | 7.14 |
| KXG37022 | Sorghum | nucleus | 3.59 | 7.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 4.57 | 6.91 |
| Zm00001d027498_P001 | Maize | mitochondrion | 1.04 | 6.57 |
| GSMUA_Achr10P... | Banana | cytosol | 4.52 | 6.57 |
| Zm00001d022570_P001 | Maize | cytosol | 2.37 | 6.37 |
| HORVU3Hr1G028090.1 | Barley | cytosol, nucleus | 1.1 | 6.25 |
| GSMUA_Achr5P29540_001 | Banana | cytosol | 1.51 | 6.21 |
| Os07t0691700-01 | Rice | nucleus | 3.01 | 6.14 |
| GSMUA_Achr9P04670_001 | Banana | cytosol | 4.4 | 6.08 |
| GSMUA_Achr6P32700_001 | Banana | cytosol | 5.15 | 6.04 |
| GSMUA_Achr5P14370_001 | Banana | cytosol | 2.72 | 5.54 |
| TraesCS2B01G106000.1 | Wheat | cytosol | 1.1 | 5.19 |
| GSMUA_Achr2P15470_001 | Banana | nucleus | 3.18 | 5.05 |
| TraesCS2A01G090500.1 | Wheat | nucleus | 1.1 | 4.69 |
| Zm00001d013353_P001 | Maize | nucleus | 1.04 | 4.38 |
| TraesCS2D01G088200.1 | Wheat | nucleus | 0.93 | 3.99 |
Protein Annotations
| MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030036 | EnsemblPlantsGene:GSMUA_Achr5G14360_001 | EnsemblPlants:GSMUA_Achr5P14360_001 | EnsemblPlants:GSMUA_Achr5T14360_001 | InterPro:IPR003124 |
| UniProt:M0SYG5 | PFscan:PS51082 | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 | InterPro:SCAR/WAVE_fam | UniParc:UPI00029570DD |
| InterPro:WH2_dom | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G14360_001]
Coordinates
chr5:-:10306223..10312045
Molecular Weight (calculated)
94183.5 Da
IEP (calculated)
4.306
GRAVY (calculated)
-0.297
Length
1727 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESGSGMSDY LSESKYESSL TEVFEGHIEV VSHPSNASIE KSPQLTDQDA EVCSTESTPI LISAIVPITD KDCTEKLENI DVENLEVGCE DTDDMTKQNL
0101: AMPEIPQPQL EHFSGTEETL QSPKVKLAEP QESHKTNSTE QVPLCFESET FFDRVINYPV LVGDGLKLAN EYIQENLQSD VQGFEQITDV KDMSAENFAS
0201: EDETNSYDSS PVYTKESSGL PLQLVEDSID SAVSYQHQMK TRETFNPKMA KSLDSQSTPD MAVFSGVEQS AQDPVASHGL PVEDSSDAND DGLHGDICDM
0301: MPNVHVHGNL HPFVNDTCLE YPVESKQDFG PKYSAQGHHE SAKQEMSLSA NLLLDHASAS LPEEAFTLQA SNEVEIESSH QKGEYFELDI PINSVDVDEE
0401: PSEGPEQNHH AFMSNVKYDE LDITPSSTTM TEKLGSALVS SECCSEISAC QIASNVSDMT FSLSPSSVVF VTESTSRLSS EPQSDESTSC FPSQNSEEPP
0501: PLPPLPPLQW RTQKLQVSSL LPNANSSASL AVTNPFVTPS DIKPANKFIT SPSGLSELPP IVVDQSHQSD AQCLEGNLVH SSNSLSLISS SLVYEKNMHA
0601: PDAQEVLRLP LADSFTPXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0801: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0901: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXQ ISQLWPGSDL
1501: EKFHYSEHNH LKLEKEVIQP QNLFLFESTL EDYNHHHNYG DFGGESAHLL KSSDLSLFSR LEMPQSGYVY SLEGSHSTPF GVVPTREDEW HSIKPHSIRN
1601: RPRNPLIEAV AAHDRSTLRK VPEQAKPSNE SKADKKDAVL ESNILQLRKV SEHMKPSNKP KADERDELLE QIRNKSFSLK PAVLSKTNNK GHSTNIKVAA
1701: ILEKANALRQ AMVGSDEEDG GDGWSDC
0101: AMPEIPQPQL EHFSGTEETL QSPKVKLAEP QESHKTNSTE QVPLCFESET FFDRVINYPV LVGDGLKLAN EYIQENLQSD VQGFEQITDV KDMSAENFAS
0201: EDETNSYDSS PVYTKESSGL PLQLVEDSID SAVSYQHQMK TRETFNPKMA KSLDSQSTPD MAVFSGVEQS AQDPVASHGL PVEDSSDAND DGLHGDICDM
0301: MPNVHVHGNL HPFVNDTCLE YPVESKQDFG PKYSAQGHHE SAKQEMSLSA NLLLDHASAS LPEEAFTLQA SNEVEIESSH QKGEYFELDI PINSVDVDEE
0401: PSEGPEQNHH AFMSNVKYDE LDITPSSTTM TEKLGSALVS SECCSEISAC QIASNVSDMT FSLSPSSVVF VTESTSRLSS EPQSDESTSC FPSQNSEEPP
0501: PLPPLPPLQW RTQKLQVSSL LPNANSSASL AVTNPFVTPS DIKPANKFIT SPSGLSELPP IVVDQSHQSD AQCLEGNLVH SSNSLSLISS SLVYEKNMHA
0601: PDAQEVLRLP LADSFTPXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0801: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0901: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXQ ISQLWPGSDL
1501: EKFHYSEHNH LKLEKEVIQP QNLFLFESTL EDYNHHHNYG DFGGESAHLL KSSDLSLFSR LEMPQSGYVY SLEGSHSTPF GVVPTREDEW HSIKPHSIRN
1601: RPRNPLIEAV AAHDRSTLRK VPEQAKPSNE SKADKKDAVL ESNILQLRKV SEHMKPSNKP KADERDELLE QIRNKSFSLK PAVLSKTNNK GHSTNIKVAA
1701: ILEKANALRQ AMVGSDEEDG GDGWSDC
001: MEKFLKNSSP YCERVHGTMD QSSPAMETEV TVCSEQEDLP IPSLVYSNSG GTRKYNEMEI ESIAGHEILE IPFVPHEITV NEKSPVVCLE SSSSVNLCCK
101: TNNDADSPAS TESEVKEAGS DDKAGCDHGF PGFGQPQICT NAEVNQTEVL TQFSNVLRHS PEEGESSLLC TDIQRASPES KPHKAEEAAV DLDESFSQMT
201: PDIDSAGMGT LEILQTPFSL SCYESPANLP EDSGSHLELQ SNKANAEACE VFEVRRDPML NISPETHLLK VTQVPQDAYE GGTNDVHSQH VFSVETASEI
301: SVSALVEDQF SSITNQEIEA LESEDISSEA GHFIPDTKKS LNETSVALES DFLLPNHYIS TFDNFEDLSL SADAQDYAAP KEDETNSQDG SSMNPAQSKH
401: ISTSEISSEN GTLMSDTPRD LHTGYGSLSA SSCLEDGLAN PDLAEISSYS GQEDPQTMSI VSDDSSDPEV PIPDGTCFAG DVDHDNQTGL NNKAIETVPQ
501: KELETISDPQ ESLLGTEECL SSEYCLQIQN QRQESPSETG SANSRTSSDE SPPTQNGSVG VQSSPLDVFP SSITEIEALH APYQEIFTSL NDHISESVLS
601: KGLTDEEDFL NVSPESILPL STSLHETPQA NPEITPPLPP LPPTQWWMGK LVESTEMPSL AGSGNNSFNI QRDENTQNGS VQANEAQYPS EVSVTDGENH
701: NFHIYTEESK ATEEQSPSGV NGTSDTYMES KHKCLNRTPE DSFSLAESAQ GLEADWRTEA MALEWFSQNL REHNNPHPAK LEEEEPQVDH PLEKPGQTKF
801: RQTLRDNNSY NQNQKAGKLK RDEDTLVIGI DRSMLRKVSE GNRTHVGARV DENDSLLEII RSKSFNLRPA DASGRPNFQV AVPKTNLKVA AILEKANTLR
901: QAMAGSDDEH DSDSWSE
101: TNNDADSPAS TESEVKEAGS DDKAGCDHGF PGFGQPQICT NAEVNQTEVL TQFSNVLRHS PEEGESSLLC TDIQRASPES KPHKAEEAAV DLDESFSQMT
201: PDIDSAGMGT LEILQTPFSL SCYESPANLP EDSGSHLELQ SNKANAEACE VFEVRRDPML NISPETHLLK VTQVPQDAYE GGTNDVHSQH VFSVETASEI
301: SVSALVEDQF SSITNQEIEA LESEDISSEA GHFIPDTKKS LNETSVALES DFLLPNHYIS TFDNFEDLSL SADAQDYAAP KEDETNSQDG SSMNPAQSKH
401: ISTSEISSEN GTLMSDTPRD LHTGYGSLSA SSCLEDGLAN PDLAEISSYS GQEDPQTMSI VSDDSSDPEV PIPDGTCFAG DVDHDNQTGL NNKAIETVPQ
501: KELETISDPQ ESLLGTEECL SSEYCLQIQN QRQESPSETG SANSRTSSDE SPPTQNGSVG VQSSPLDVFP SSITEIEALH APYQEIFTSL NDHISESVLS
601: KGLTDEEDFL NVSPESILPL STSLHETPQA NPEITPPLPP LPPTQWWMGK LVESTEMPSL AGSGNNSFNI QRDENTQNGS VQANEAQYPS EVSVTDGENH
701: NFHIYTEESK ATEEQSPSGV NGTSDTYMES KHKCLNRTPE DSFSLAESAQ GLEADWRTEA MALEWFSQNL REHNNPHPAK LEEEEPQVDH PLEKPGQTKF
801: RQTLRDNNSY NQNQKAGKLK RDEDTLVIGI DRSMLRKVSE GNRTHVGARV DENDSLLEII RSKSFNLRPA DASGRPNFQV AVPKTNLKVA AILEKANTLR
901: QAMAGSDDEH DSDSWSE
Arabidopsis Description
SCAR4Protein SCAR4 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.