Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034605.1-P | Field mustard | plastid | 79.41 | 81.12 |
| CDY51959 | Canola | plastid | 78.99 | 80.34 |
| CDY62720 | Canola | plastid | 76.89 | 79.91 |
| CDX69026 | Canola | plastid | 70.17 | 79.15 |
| Bra011489.1-P | Field mustard | plastid | 77.31 | 78.63 |
| CDX75398 | Canola | plastid | 73.95 | 77.19 |
| CDX72451 | Canola | plastid | 73.11 | 76.32 |
| CDY49275 | Canola | plastid | 72.69 | 75.88 |
| KRH70676 | Soybean | plastid | 57.56 | 60.89 |
| Solyc01g107860.2.1 | Tomato | plastid | 60.5 | 59.5 |
| Bra017627.1-P | Field mustard | plastid | 69.75 | 59.29 |
| KRH50338 | Soybean | plastid | 53.78 | 57.66 |
| VIT_03s0063g00060.t01 | Wine grape | plastid | 53.36 | 55.22 |
| PGSC0003DMT400066577 | Potato | plastid | 52.1 | 53.91 |
| AT4G36910.1 | Thale cress | plastid | 50.0 | 50.42 |
Protein Annotations
| Gene3D:3.10.580.10 | MapMan:35.1 | PDB:3SL7 | PDB:4GQY | EntrezGene:829558 | UniProt:A0A178V5S0 |
| ProteinID:AEE86326.1 | EMBL:AF360331 | ArrayExpress:AT4G34120 | EnsemblPlantsGene:AT4G34120 | RefSeq:AT4G34120 | TAIR:AT4G34120 |
| RefSeq:AT4G34120-TAIR-G | EnsemblPlants:AT4G34120.1 | TAIR:AT4G34120.1 | EMBL:AY056339 | Unigene:At.27243 | ProteinID:CAA17560.1 |
| ProteinID:CAB80129.1 | InterPro:CBS_dom | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0045454 | InterPro:IPR000644 | Symbol:LEJ1 | RefSeq:NP_567952.1 | ProteinID:OAP01131.1 | PFAM:PF00571 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51371 | PANTHER:PTHR43803 | PANTHER:PTHR43803:SF1 | UniProt:Q9C5D0 | SMART:SM00116 |
| SUPFAM:SSF54631 | UniParc:UPI00000AA045 | SEG:seg | : | : | : |
Description
CBSX2CBS domain-containing protein CBSX2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D0]
Coordinates
chr4:+:16340907..16343118
Molecular Weight (calculated)
25957.0 Da
IEP (calculated)
8.874
GRAVY (calculated)
-0.085
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSISLSNSM PITRLPLLTS LYHQSFLPIS SSSFSLLPLS NRRRSSTFSP SITVSAFFAA PASVNNNNSV PAKNGGYTVG DFMTPRQNLH VVKPSTSVDD
101: ALELLVEKKV TGLPVIDDNW TLVGVVSDYD LLALDSISGR SQNDTNLFPD VDSTWKTFNE LQKLISKTYG KVVGDLMTPS PLVVRDSTNL EDAARLLLET
201: KFRRLPVVDA DGKLIGILTR GNVVRAALQI KRETENST
101: ALELLVEKKV TGLPVIDDNW TLVGVVSDYD LLALDSISGR SQNDTNLFPD VDSTWKTFNE LQKLISKTYG KVVGDLMTPS PLVVRDSTNL EDAARLLLET
201: KFRRLPVVDA DGKLIGILTR GNVVRAALQI KRETENST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.