Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400015836 | Potato | cytosol, nucleus, plastid | 90.24 | 37.37 |
| PGSC0003DMT400009227 | Potato | cytosol | 84.15 | 35.03 |
| PGSC0003DMT400058108 | Potato | cytosol | 80.49 | 33.5 |
| PGSC0003DMT400061371 | Potato | cytosol | 78.05 | 32.49 |
| PGSC0003DMT400027852 | Potato | cytosol | 71.95 | 29.95 |
| PGSC0003DMT400004254 | Potato | cytosol | 71.95 | 28.37 |
| PGSC0003DMT400063229 | Potato | cytosol | 68.29 | 26.67 |
| PGSC0003DMT400022302 | Potato | cytosol | 63.41 | 24.76 |
| PGSC0003DMT400000816 | Potato | cytosol | 62.2 | 24.17 |
| Solyc10g055520.1.1 | Tomato | cytosol | 18.29 | 9.43 |
| KRH55628 | Soybean | cytosol | 7.32 | 8.22 |
| PGSC0003DMT400063227 | Potato | cytosol | 15.85 | 8.12 |
| PGSC0003DMT400031185 | Potato | cytosol | 2.44 | 1.92 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400031188 | EnsemblPlantsGene:PGSC0003DMG402011945 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase | InterPro:Small_GTPase |
| PANTHER:PTHR24072 | PANTHER:PTHR24072:SF249 | PFAM:PF00071 | PGSC:PGSC0003DMG402011945 | SEG:seg | SMART:SM00174 |
| SUPFAM:SSF52540 | UniParc:UPI000294DDD8 | UniProt:M1AVA8 | MapMan:35.1 | : | : |
Description
NTGP3 [Source:PGSC_GENE;Acc:PGSC0003DMG402011945]
Coordinates
chr10:+:47167961..47168939
Molecular Weight (calculated)
9049.2 Da
IEP (calculated)
10.493
GRAVY (calculated)
-0.433
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MLPLDLREDK QFFLDHPGAV PISTAQGEEL KKSIGAAAYI ECSAKTQQNV KAVFDAAIRV VLQPPKQKKK KKRKGQKACS IL
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVIVD GNTINLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLVSK ASYENVSKKW
101: VPELRHYAPG VPIILVGTKL DLRDDKQFFA EHPGAVPIST AQGEELKKLI GAPAYIECSA KTQQNVKAVF DAAIKVVLQP PKNKKKKKRK SQKGCSIL
101: VPELRHYAPG VPIILVGTKL DLRDDKQFFA EHPGAVPIST AQGEELKKLI GAPAYIECSA KTQQNVKAVF DAAIKVVLQP PKNKKKKKRK SQKGCSIL
Arabidopsis Description
ARAC3At4g35020 [Source:UniProtKB/TrEMBL;Acc:Q5PNX9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.