Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022937.1-P | Field mustard | cytosol, nucleus, plastid | 97.78 | 97.78 |
| CDX79525 | Canola | cytosol, nucleus, plastid | 93.33 | 92.31 |
| CDY23741 | Canola | cytosol, nucleus, plastid | 86.67 | 76.47 |
| CDY17170 | Canola | cytosol, nucleus, plastid | 84.44 | 73.08 |
| CDY19489 | Canola | cytosol, nucleus, plastid | 82.22 | 71.15 |
| KRH33624 | Soybean | cytosol, nucleus, plastid | 55.56 | 51.02 |
| VIT_05s0049g01730.t01 | Wine grape | cytosol, nucleus, plastid | 48.89 | 47.83 |
| PGSC0003DMT400044192 | Potato | nucleus | 48.89 | 45.36 |
| KRH34540 | Soybean | nucleus | 53.33 | 44.44 |
| Solyc09g090540.2.1 | Tomato | nucleus | 47.78 | 44.33 |
| KRG92271 | Soybean | nucleus | 53.33 | 44.04 |
| CDY18728 | Canola | nucleus | 73.33 | 36.87 |
| KRG90361 | Soybean | cytosol, nucleus, plastid | 43.33 | 34.51 |
Protein Annotations
| EnsemblPlants:CDX84690 | EnsemblPlantsGene:GSBRNA2T00141970001 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009642 | InterPro:OHP2 |
| PANTHER:PTHR33401 | PANTHER:PTHR33401:SF2 | ProteinID:CDX84690 | ProteinID:CDX84690.1 | SEG:seg | UniParc:UPI0004EF45A9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g15400D
Coordinates
chrLK031838:-:734862..736178
Molecular Weight (calculated)
9966.3 Da
IEP (calculated)
3.997
GRAVY (calculated)
-0.986
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MDTTRGEAKE ANGCENHKAI VEEEEEESES QCLLPPPRKG GMSRSTDKVK RTVQWTDNKG DNLAEVLVYE PSEVSDSDDD DSDACICTIM
1: MDTGRGEGKE ANGCENKAIV SLNSSEIEDQ IFEEEESESQ CLLPPRKGGM SRSTDKIKRT VQWNDIKGDN LAEVLVYEPS EVSDTEDDDS DSCICTIM
Arabidopsis Description
Putative uncharacterized protein At2g33390 [Source:UniProtKB/TrEMBL;Acc:O22789]
SUBAcon: [extracellular,cytosol,nucleus]
SUBAcon: [extracellular,cytosol,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.