Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g090540.2.1 | Tomato | nucleus | 96.91 | 96.91 |
| KRH33624 | Soybean | cytosol, nucleus, plastid | 52.58 | 52.04 |
| VIT_05s0049g01730.t01 | Wine grape | cytosol, nucleus, plastid | 48.45 | 51.09 |
| Bra022937.1-P | Field mustard | cytosol, nucleus, plastid | 45.36 | 48.89 |
| CDX84690 | Canola | cytosol, nucleus, plastid | 45.36 | 48.89 |
| CDX79525 | Canola | cytosol, nucleus, plastid | 45.36 | 48.35 |
| KRH34540 | Soybean | nucleus | 53.61 | 48.15 |
| AT2G33390.1 | Thale cress | cytosol, extracellular, nucleus | 47.42 | 46.94 |
| CDY19489 | Canola | cytosol, nucleus, plastid | 49.48 | 46.15 |
| KRG92271 | Soybean | nucleus | 51.55 | 45.87 |
| CDY17170 | Canola | cytosol, nucleus, plastid | 48.45 | 45.19 |
| CDY23741 | Canola | cytosol, nucleus, plastid | 45.36 | 43.14 |
| Bra021848.1-P | Field mustard | cytosol, nucleus, plastid | 31.96 | 36.47 |
| KRG90361 | Soybean | cytosol, nucleus, plastid | 39.18 | 33.63 |
| Bra005499.1-P | Field mustard | cytosol, nucleus, plastid | 32.99 | 33.33 |
| CDY18728 | Canola | nucleus | 40.21 | 21.79 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400044192 | EnsemblPlantsGene:PGSC0003DMG400017155 | EntrezGene:102603875 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009642 |
| InterPro:OHP2 | PANTHER:PTHR33401 | PANTHER:PTHR33401:SF2 | PGSC:PGSC0003DMG400017155 | RefSeq:XP_006354445.1 | SEG:seg |
| UniParc:UPI00029494B4 | UniProt:M1BFR9 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400017155]
Coordinates
chr9:-:56886468..56888757
Molecular Weight (calculated)
10765.4 Da
IEP (calculated)
4.490
GRAVY (calculated)
-1.063
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MDTKNNKDFK GEKIQYVDSV EALPNSVLNG GKDEDDESKA LLPSRKGGLS KKIAKPKRKV QWNDTNGNKL TEVLEFEPSD ASDSDDDDSD SCICRIM
1: MDTGRGEGKE ANGCENKAIV SLNSSEIEDQ IFEEEESESQ CLLPPRKGGM SRSTDKIKRT VQWNDIKGDN LAEVLVYEPS EVSDTEDDDS DSCICTIM
Arabidopsis Description
Putative uncharacterized protein At2g33390 [Source:UniProtKB/TrEMBL;Acc:O22789]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.