Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 1
- endoplasmic reticulum 1
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17170 | Canola | cytosol, nucleus, plastid | 87.76 | 82.69 |
| CDY19489 | Canola | cytosol, nucleus, plastid | 86.73 | 81.73 |
| CDY23741 | Canola | cytosol, nucleus, plastid | 83.67 | 80.39 |
| Bra021848.1-P | Field mustard | cytosol, nucleus, plastid | 67.35 | 77.65 |
| Bra005499.1-P | Field mustard | cytosol, nucleus, plastid | 66.33 | 67.71 |
| KRH33624 | Soybean | cytosol, nucleus, plastid | 56.12 | 56.12 |
| VIT_05s0049g01730.t01 | Wine grape | cytosol, nucleus, plastid | 51.02 | 54.35 |
| KRH34540 | Soybean | nucleus | 55.1 | 50.0 |
| KRG92271 | Soybean | nucleus | 55.1 | 49.54 |
| PGSC0003DMT400044192 | Potato | nucleus | 46.94 | 47.42 |
| Solyc09g090540.2.1 | Tomato | nucleus | 45.92 | 46.39 |
| KRG90361 | Soybean | cytosol, nucleus, plastid | 43.88 | 38.05 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817903 | UniProt:A0A178VPJ3 | ProteinID:AAB80657.1 | ProteinID:AEC08829.1 | ArrayExpress:AT2G33390 |
| EnsemblPlantsGene:AT2G33390 | RefSeq:AT2G33390 | TAIR:AT2G33390 | RefSeq:AT2G33390-TAIR-G | EnsemblPlants:AT2G33390.1 | TAIR:AT2G33390.1 |
| EMBL:AY080714 | EMBL:BT000917 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009642 | RefSeq:NP_180897.1 |
| UniProt:O22789 | ProteinID:OAP08289.1 | InterPro:OHP2 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR33401 | PANTHER:PTHR33401:SF2 | UniParc:UPI00000AC10D | SEG:seg | : |
Description
Putative uncharacterized protein At2g33390 [Source:UniProtKB/TrEMBL;Acc:O22789]
Coordinates
chr2:+:14150993..14153118
Molecular Weight (calculated)
10849.4 Da
IEP (calculated)
3.894
GRAVY (calculated)
-0.817
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MDTGRGEGKE ANGCENKAIV SLNSSEIEDQ IFEEEESESQ CLLPPRKGGM SRSTDKIKRT VQWNDIKGDN LAEVLVYEPS EVSDTEDDDS DSCICTIM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.