CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	extracellular, nucleus, plasma membrane, plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50801	Soybean	plastid	91.35	92.86
CDX74080	Canola	endoplasmic reticulum, extracellular	14.05	59.09
VIT_05s0077g01850.t01	Wine grape	cytosol	50.81	49.74
CDY08034	Canola	cytosol	41.62	46.39
PGSC0003DMT400044529	Potato	plastid	51.89	46.15
CDY34930	Canola	plastid	40.0	42.77
Bra040291.1-P	Field mustard	plastid	38.92	42.35
AT3G06780.1	Thale cress	cytosol, nucleus, peroxisome	45.95	42.29
Bra029605.1-P	Field mustard	nucleus, vacuole	43.24	41.24
CDY24665	Canola	nucleus, vacuole	43.24	41.03
CDY05293	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	44.32	41.0
Solyc07g055660.2.1	Tomato	plastid	35.68	40.49
Bra001217.1-P	Field mustard	nucleus	29.19	34.62

Protein Annotations

EMBL:ACUP02010302	EnsemblPlants:KRH02291	EnsemblPlantsGene:GLYMA_17G029000	EntrezGene:100810316	PANTHER:PTHR36751	ProteinID:KRH02291
ProteinID:KRH02291.1	SEG:seg	UniParc:UPI000233EAC3	UniProt:I1MRL4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr17:-:2147897..2150720

Molecular Weight (calculated)

19799.7 Da

IEP (calculated)

8.853

GRAVY (calculated)

-0.085

Length

185 amino acids

Sequence
(BLAST)

001: MITIMMVADT VAVTAAKGLG VLRAYQSTCN FSVADQISAM IQTYDAVAPP PVKPTTYRLR RRTLLRRKQL TKRRLSGDDS GDAGNEGFLF GDGGDGPFGG
101: GGDFGGGGVG GGGWNFNRFG GGNNWDEPSS SVPDPAFDFV YQVLSWIMLS NCLHFSFKRI VRIVAAGSIV DSDREKVPAR LVPIC

Best Arabidopsis Sequence Match ( AT3G06780.1 )
(BLAST)

001: MEFSLIADTV TVCTAKQGIA FGKSLLQRLD LANHISFADS VVDHQSPGGG IVQASAIIFP VDAIAPPPVR SSSYKTIRRI RKKRRTRRVS FGGDGDDAGD
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C

Arabidopsis Description

F3E22.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9M7Y4]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.