Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74080 | Canola | endoplasmic reticulum, extracellular | 21.08 | 79.55 |
| Bra001217.1-P | Field mustard | nucleus | 72.89 | 77.56 |
| CDY34930 | Canola | plastid | 76.51 | 73.41 |
| AT3G06780.1 | Thale cress | cytosol, nucleus, peroxisome | 81.93 | 67.66 |
| CDY24665 | Canola | nucleus, vacuole | 77.71 | 66.15 |
| CDY05293 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 78.92 | 65.5 |
| VIT_05s0077g01850.t01 | Wine grape | cytosol | 57.83 | 50.79 |
| KRH50801 | Soybean | plastid | 46.99 | 42.86 |
| KRH02291 | Soybean | extracellular, plastid | 46.39 | 41.62 |
| PGSC0003DMT400044529 | Potato | plastid | 48.19 | 38.46 |
| Solyc07g055660.2.1 | Tomato | plastid | 37.35 | 38.04 |
Protein Annotations
| EnsemblPlants:CDY08034 | EnsemblPlantsGene:GSBRNA2T00125283001 | PANTHER:PTHR36751 | ProteinID:CDY08034 | ProteinID:CDY08034.1 | SEG:seg |
| UniParc:UPI0004EE8964 | UniProt:A0A078F4V2 | MapMan:35.2 | : | : | : |
Description
BnaC03g34890DBnaC03g34890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4V2]
Coordinates
chrLK031982:-:724806..725306
Molecular Weight (calculated)
17922.3 Da
IEP (calculated)
7.295
GRAVY (calculated)
-0.114
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFCLIADTI SVCTAKQGIA FGKSLLNRWE HISFADSPVD QAPAVIFPVD AIAPSIQSSS IKTIRRIRKK RRTKRVSFGG DSEDGGDFGR FVLEGGFGGN
101: DGPFGFGGGG DGGGGGNWDE PSSWSDPAME FVYEVIGWIA LSNCVHFAFK RIVRREKLNL SLSPVC
101: DGPFGFGGGG DGGGGGNWDE PSSWSDPAME FVYEVIGWIA LSNCVHFAFK RIVRREKLNL SLSPVC
001: MEFSLIADTV TVCTAKQGIA FGKSLLQRLD LANHISFADS VVDHQSPGGG IVQASAIIFP VDAIAPPPVR SSSYKTIRRI RKKRRTRRVS FGGDGDDAGD
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C
Arabidopsis Description
F3E22.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9M7Y4]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.