Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34930 | Canola | plastid | 95.45 | 24.28 |
| CDY24665 | Canola | nucleus, vacuole | 97.73 | 22.05 |
| CDY05293 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 97.73 | 21.5 |
| CDY08034 | Canola | cytosol | 79.55 | 21.08 |
| AT3G06780.1 | Thale cress | cytosol, nucleus, peroxisome | 93.18 | 20.4 |
| Solyc07g055660.2.1 | Tomato | plastid | 59.09 | 15.95 |
| VIT_05s0077g01850.t01 | Wine grape | cytosol | 65.91 | 15.34 |
| KRH50801 | Soybean | plastid | 61.36 | 14.84 |
| KRH02291 | Soybean | extracellular, plastid | 59.09 | 14.05 |
| PGSC0003DMT400044529 | Potato | plastid | 59.09 | 12.5 |
Protein Annotations
| EnsemblPlants:CDX74080 | EnsemblPlantsGene:GSBRNA2T00111830001 | PANTHER:PTHR36751 | ProteinID:CDX74080 | ProteinID:CDX74080.1 | UniParc:UPI0004EE2763 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g29670D
Coordinates
chrLK031800:-:1211251..1211385
Molecular Weight (calculated)
5162.4 Da
IEP (calculated)
7.182
GRAVY (calculated)
0.477
Length
44 amino acids
Sequence
(BLAST)
(BLAST)
1: MEFVYEVICW IALSNCVHFA FKRMVRIVTD GEREKLNLTL SPVC
001: MEFSLIADTV TVCTAKQGIA FGKSLLQRLD LANHISFADS VVDHQSPGGG IVQASAIIFP VDAIAPPPVR SSSYKTIRRI RKKRRTRRVS FGGDGDDAGD
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C
Arabidopsis Description
F3E22.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9M7Y4]
SUBAcon: [cytosol,nucleus,peroxisome]
SUBAcon: [cytosol,nucleus,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.