CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02291	Soybean	extracellular, plastid	92.86	91.35
CDX74080	Canola	endoplasmic reticulum, extracellular	14.84	61.36
VIT_05s0077g01850.t01	Wine grape	cytosol	52.75	50.79
CDY08034	Canola	cytosol	42.86	46.99
PGSC0003DMT400044529	Potato	plastid	53.3	46.63
Bra040291.1-P	Field mustard	plastid	40.66	43.53
CDY34930	Canola	plastid	41.21	43.35
Solyc07g055660.2.1	Tomato	plastid	38.46	42.94
AT3G06780.1	Thale cress	cytosol, nucleus, peroxisome	47.25	42.79
CDY05293	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	45.6	41.5
Bra029605.1-P	Field mustard	nucleus, vacuole	43.96	41.24
CDY24665	Canola	nucleus, vacuole	43.96	41.03
Bra001217.1-P	Field mustard	nucleus	29.12	33.97

Protein Annotations

EMBL:ACUP02004716	EnsemblPlants:KRH50801	EnsemblPlantsGene:GLYMA_07G244800	EntrezGene:100818469	PANTHER:PTHR36751	ProteinID:KRH50801
ProteinID:KRH50801.1	SEG:seg	UniParc:UPI0002338C17	UniProt:I1KMW2	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr7:+:42419353..42421266

Molecular Weight (calculated)

19581.4 Da

IEP (calculated)

8.977

GRAVY (calculated)

-0.132

Length

182 amino acids

Sequence
(BLAST)

001: MITVMMVADT VAVTTAKGLG VLRACQSTCN FSLADQISAM IQTYDAVAPP PVKPTTYRLR RRTLLRRKQR TKRRLSGDDS GDAGDEGFLF GDGGDGPFGG
101: GGGFGGSGGG WNFNRFGSGH NWDEPSSSVP DPAFDFVYQV LSWIMLSNCL HFAFKRIVRI VAAGSIVDSD REKVPARLAP IC

Best Arabidopsis Sequence Match ( AT3G06780.1 )
(BLAST)

001: MEFSLIADTV TVCTAKQGIA FGKSLLQRLD LANHISFADS VVDHQSPGGG IVQASAIIFP VDAIAPPPVR SSSYKTIRRI RKKRRTRRVS FGGDGDDAGD
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C

Arabidopsis Description

F3E22.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9M7Y4]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.