Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24665 | Canola | nucleus, vacuole | 100.0 | 99.49 |
| Bra040291.1-P | Field mustard | plastid | 70.1 | 80.0 |
| AT3G06780.1 | Thale cress | cytosol, nucleus, peroxisome | 77.32 | 74.63 |
| Bra001217.1-P | Field mustard | nucleus | 52.06 | 64.74 |
| VIT_05s0077g01850.t01 | Wine grape | cytosol | 53.61 | 55.03 |
| PGSC0003DMT400044529 | Potato | plastid | 47.42 | 44.23 |
| KRH50801 | Soybean | plastid | 41.24 | 43.96 |
| KRH02291 | Soybean | extracellular, plastid | 41.24 | 43.24 |
| Solyc07g055660.2.1 | Tomato | plastid | 36.08 | 42.94 |
Protein Annotations
Description
AT3G06780 (E=2e-040) | glycine-rich protein
Coordinates
chrA05:-:23032348..23032932
Molecular Weight (calculated)
20555.2 Da
IEP (calculated)
7.936
GRAVY (calculated)
-0.054
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSLIAETV AFSTAKQCVA FGSSLLLLNR ANHVSFTADS LVDQSPAGIV QASAAVIFPV DAIAPSPVRS SSYKTIRRIR KRRRAKRVSY GGDSEDGGDF
101: GRFLLEGGFG GSDGPFGFGG GGGGKGWNYG GGGGGGNWDE SSSSSWSDPA MEFVYEVICW IALSNCVHFA FKRIVRIVTD GEREKLNLTL SPVC
101: GRFLLEGGFG GSDGPFGFGG GGGGKGWNYG GGGGGGNWDE SSSSSWSDPA MEFVYEVICW IALSNCVHFA FKRIVRIVTD GEREKLNLTL SPVC
001: MEFSLIADTV TVCTAKQGIA FGKSLLQRLD LANHISFADS VVDHQSPGGG IVQASAIIFP VDAIAPPPVR SSSYKTIRRI RKKRRTRRVS FGGDGDDAGD
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C
Arabidopsis Description
F3E22.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9M7Y4]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.