Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- plasma membrane 1
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g055660.2.1 | Tomato | plastid | 75.48 | 96.32 |
| VIT_05s0077g01850.t01 | Wine grape | cytosol | 54.33 | 59.79 |
| CDX74080 | Canola | endoplasmic reticulum, extracellular | 12.5 | 59.09 |
| KRH50801 | Soybean | plastid | 46.63 | 53.3 |
| KRH02291 | Soybean | extracellular, plastid | 46.15 | 51.89 |
| CDY08034 | Canola | cytosol | 38.46 | 48.19 |
| AT3G06780.1 | Thale cress | cytosol, nucleus, peroxisome | 46.15 | 47.76 |
| Bra029605.1-P | Field mustard | nucleus, vacuole | 44.23 | 47.42 |
| CDY24665 | Canola | nucleus, vacuole | 44.23 | 47.18 |
| Bra040291.1-P | Field mustard | plastid | 38.46 | 47.06 |
| CDY34930 | Canola | plastid | 38.94 | 46.82 |
| CDY05293 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 44.71 | 46.5 |
| Bra001217.1-P | Field mustard | nucleus | 31.73 | 42.31 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400044529 | EnsemblPlantsGene:PGSC0003DMG400017287 | EntrezGene:102589448 | PANTHER:PTHR36751 | PGSC:PGSC0003DMG400017287 | RefSeq:XP_006348916.1 |
| SEG:seg | UniParc:UPI0002961C17 | UniProt:M1BGB3 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400017287]
Coordinates
chr7:+:50746949..50748052
Molecular Weight (calculated)
22204.1 Da
IEP (calculated)
7.917
GRAVY (calculated)
-0.135
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MEISMISDTL TTVVTTQGLG FSKFLLNRNL NFSSNNIFSL SDSSSEQQSP STAGVRQISA VICPIDALAP PPVKYNKVKA APRRLACKTR RIIRKSLIGG
101: ADEGDENGFL FDGGNYDGPF GGGSSWGGGG GGGGRGWNFD GFGGANWEES SSNSFSDPAF DFVYELMCWA ALSNCLHFAF KKVVRIVAGG FSDTAREKVV
201: PVRLTSVY
101: ADEGDENGFL FDGGNYDGPF GGGSSWGGGG GGGGRGWNFD GFGGANWEES SSNSFSDPAF DFVYELMCWA ALSNCLHFAF KKVVRIVAGG FSDTAREKVV
201: PVRLTSVY
001: MEFSLIADTV TVCTAKQGIA FGKSLLQRLD LANHISFADS VVDHQSPGGG IVQASAIIFP VDAIAPPPVR SSSYKTIRRI RKKRRTRRVS FGGDGDDAGD
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C
101: FGRFLLEGDF GGSDGPFGFG GGGNDGGGKG WNYGGGGGGF GRDNWDGSSF SSWSDPAMEF VYEVICWIAL SNCVHFAFKR IVRIVTDGER EKLNIALSPV
201: C
Arabidopsis Description
F3E22.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9M7Y4]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.