Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH39187 | Soybean | cytosol, extracellular, nucleus | 78.26 | 70.79 |
| HORVU2Hr1G116130.4 | Barley | nucleus | 27.95 | 33.83 |
| KRH36324 | Soybean | nucleus | 40.37 | 19.58 |
| KRG95103 | Soybean | nucleus | 50.93 | 17.86 |
| KRH66771 | Soybean | nucleus | 50.31 | 17.61 |
| KRG93068 | Soybean | nucleus | 47.83 | 17.34 |
| KRH20680 | Soybean | nucleus | 49.69 | 17.06 |
| KRG97639 | Soybean | nucleus | 36.65 | 16.3 |
| KRH31239 | Soybean | nucleus | 36.02 | 15.93 |
| KRH59415 | Soybean | nucleus | 36.02 | 15.68 |
| KRH43266 | Soybean | nucleus | 36.02 | 15.3 |
| KRH13334 | Soybean | nucleus | 47.2 | 15.29 |
| KRH70569 | Soybean | nucleus | 43.48 | 14.99 |
| KRH64780 | Soybean | nucleus | 33.54 | 14.92 |
| KRH35977 | Soybean | nucleus | 42.24 | 14.91 |
| KRH66777 | Soybean | nucleus | 26.71 | 14.83 |
| KRG90784 | Soybean | nucleus | 40.99 | 14.51 |
| KRH75411 | Soybean | nucleus | 43.48 | 14.4 |
| KRH53141 | Soybean | nucleus | 31.68 | 14.37 |
| KRH18838 | Soybean | nucleus | 32.92 | 14.32 |
| KRH16629 | Soybean | nucleus | 32.3 | 14.05 |
| KRH26635 | Soybean | nucleus | 42.24 | 13.93 |
| KRH22685 | Soybean | nucleus | 42.24 | 13.88 |
| KRH71904 | Soybean | nucleus | 41.61 | 13.84 |
| KRH67029 | Soybean | nucleus | 41.61 | 13.65 |
| KRG95350 | Soybean | nucleus | 41.61 | 13.65 |
| KRH30432 | Soybean | nucleus | 40.37 | 13.18 |
| KRH25227 | Soybean | nucleus | 39.75 | 12.77 |
| KRH32997 | Soybean | nucleus | 40.37 | 12.57 |
| Zm00001d045823_P001 | Maize | cytosol | 16.77 | 8.94 |
| Os01t0859600-01 | Rice | cytosol | 17.39 | 6.71 |
| KRG92164 | Soybean | nucleus | 7.45 | 5.11 |
| KRH34622 | Soybean | cytosol | 6.21 | 4.33 |
| KRH63045 | Soybean | cytosol | 1.24 | 2.13 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:A0A0R0H3W8 | EMBL:ACUP02008365 | ncoils:Coil | EnsemblPlantsGene:GLYMA_13G260300 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | EnsemblPlants:KRH21813 | ProteinID:KRH21813 | ProteinID:KRH21813.1 |
| PFAM:PF07716 | ScanProsite:PS00036 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF206 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0006ED79D3 | InterPro:bZIP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:36454861..36457880
Molecular Weight (calculated)
19432.3 Da
IEP (calculated)
9.526
GRAVY (calculated)
-0.532
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MEATNVHPPR ISEFGTLDQS LGFRIEDTNC LNLSYIQKHA YFYSKIWCFI VFWQPERCES SGSKDKSNQK TLRRLAQNCE AARKSRLRKK AYQQQLESSR
101: FKLTQLEQEL QRARQQVWFC TYIYCFRSKF DTYPAILLTQ LMYFFEEAYQ NRLIRIISYL L
101: FKLTQLEQEL QRARQQVWFC TYIYCFRSKF DTYPAILLTQ LMYFFEEAYQ NRLIRIISYL L
001: MADTSSRTDV STDGDTDHRD LGSDRGHMHA AASDSSDRSK DKLDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSSG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT
301: RQSARALLAI HDYSSRLRAL SSLWLARPRE
Arabidopsis Description
TGA6TGACG motif-binding factor 6 [Source:UniProtKB/TrEMBL;Acc:F4J8P7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.