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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 3
  • nucleus 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 PGSC0003DMT400037344 AT4G26630.1 25387881
AT1G62670.1 PGSC0003DMT400057390 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g007810.1.1 Tomato cytosol 45.58 84.7
PGSC0003DMT400008759 Potato cytosol 52.81 82.45
PGSC0003DMT400056665 Potato mitochondrion 87.75 74.19
PGSC0003DMT400008760 Potato mitochondrion 85.14 72.35
PGSC0003DMT400056663 Potato plastid 84.34 71.43
PGSC0003DMT400025074 Potato cytosol 76.31 68.84
PGSC0003DMT400025087 Potato endoplasmic reticulum 68.27 68.69
PGSC0003DMT400052977 Potato cytosol 52.61 67.35
PGSC0003DMT400025067 Potato cytosol 63.45 66.39
PGSC0003DMT400052971 Potato mitochondrion 75.5 63.41
PGSC0003DMT400053182 Potato cytosol 76.1 63.27
PGSC0003DMT400053185 Potato mitochondrion 74.1 62.54
PGSC0003DMT400053556 Potato mitochondrion 54.82 59.48
PGSC0003DMT400015293 Potato mitochondrion 55.42 45.25
PGSC0003DMT400015298 Potato mitochondrion 55.42 45.25
VIT_12s0028g02320.t01 Wine grape mitochondrion 39.16 40.88
VIT_14s0081g00270.t01 Wine grape plastid 44.58 38.28
VIT_14s0081g00110.t01 Wine grape cytosol 36.35 36.86
VIT_14s0081g00120.t01 Wine grape plastid 42.97 36.71
CDY51169 Canola cytosol 30.52 35.93
KRH70370 Soybean cytosol 39.16 35.85
CDY16110 Canola extracellular 28.92 35.12
Bra036649.1-P Field mustard cytosol 27.51 35.04
CDY03257 Canola cytosol 27.51 35.04
CDY39810 Canola cytosol 27.51 35.04
CDY09968 Canola cytosol 20.68 35.03
CDX71969 Canola cytosol 27.51 34.6
CDY06217 Canola cytosol 20.28 34.47
Bra026882.1-P Field mustard cytosol 36.95 34.46
Bra006187.1-P Field mustard plastid 19.88 34.02
Bra026884.1-P Field mustard cytosol 31.33 33.99
VIT_14s0030g02280.t01 Wine grape plastid 38.15 33.87
CDX67634 Canola cytosol 28.71 33.81
KRH49698 Soybean cytosol 38.55 33.68
KRH75045 Soybean mitochondrion 40.36 33.67
VIT_14s0081g00280.t01 Wine grape mitochondrion 43.17 33.65
Bra027636.1-P Field mustard cytosol 21.89 33.64
CDY16002 Canola cytosol 20.88 33.44
CDY26589 Canola cytosol 4.62 33.33
KRH75048 Soybean mitochondrion 40.36 33.06
CDY34688 Canola cytosol 23.9 32.87
KRH75063 Soybean mitochondrion, plastid 39.76 32.78
AT1G63330.2 Thale cress cytosol 36.55 32.56
Bra026958.1-P Field mustard mitochondrion 41.57 32.5
Bra031731.1-P Field mustard mitochondrion 33.13 32.48
CDY26588 Canola extracellular 21.08 32.41
CDY08386 Canola cytosol 28.92 32.36
CDY33797 Canola mitochondrion 33.13 32.23
CDY16031 Canola cytosol 20.08 32.15
AT3G22470.1 Thale cress cytosol, mitochondrion 39.96 32.15
CDY00489 Canola mitochondrion 37.75 32.08
KRH58843 Soybean nucleus 39.36 32.08
CDY26607 Canola cytosol 29.12 31.73
Bra027029.1-P Field mustard mitochondrion 15.46 31.69
Bra028267.1-P Field mustard mitochondrion 39.76 31.63
AT1G12620.1 Thale cress cytosol, mitochondrion 39.36 31.56
KRH42744 Soybean mitochondrion 38.55 31.42
AT1G62720.1 Thale cress mitochondrion 30.52 31.34
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 34.54 31.33
CDY26593 Canola cytosol 38.15 31.2
Bra026957.1-P Field mustard mitochondrion 37.35 30.85
Bra026971.1-P Field mustard mitochondrion 38.96 30.84
CDY34969 Canola mitochondrion 31.33 30.83
KRH38755 Soybean mitochondrion 36.75 30.81
AT1G12300.1 Thale cress mitochondrion 39.36 30.77
CDX69436 Canola plastid 30.72 30.72
CDY16033 Canola cytosol 9.24 30.67
AT1G12700.2 Thale cress cytosol 37.95 30.58
AT5G16640.1 Thale cress mitochondrion 30.92 30.56
Bra021192.1-P Field mustard plastid 30.92 30.56
AT1G62930.1 Thale cress plastid 38.55 30.52
CDY46909 Canola mitochondrion 17.87 30.48
Bra026954.1-P Field mustard mitochondrion 39.76 30.46
KRH09256 Soybean mitochondrion 34.14 30.41
AT1G63400.1 Thale cress cytosol, plastid 35.14 30.33
CDY31272 Canola mitochondrion 34.54 30.28
Bra025516.1-P Field mustard cytosol, mitochondrion 28.92 30.19
AT1G63130.1 Thale cress mitochondrion 38.15 30.16
Bra026836.1-P Field mustard cytosol, mitochondrion 29.72 30.14
AT1G62910.1 Thale cress mitochondrion 38.15 30.06
CDY26565 Canola mitochondrion 34.34 30.05
Bra016762.1-P Field mustard mitochondrion 36.55 29.98
CDY68929 Canola mitochondrion 36.55 29.98
AT1G63080.3 Thale cress mitochondrion 36.95 29.97
CDY48949 Canola mitochondrion 28.92 29.94
AT1G12775.1 Thale cress cytosol, mitochondrion 38.55 29.81
VIT_14s0030g02260.t01 Wine grape cytosol 26.51 29.8
CDY25492 Canola mitochondrion 29.32 29.74
AT3G16710.1 Thale cress mitochondrion 30.12 29.59
CDY46394 Canola mitochondrion 28.51 29.52
Bra036651.1-P Field mustard mitochondrion 31.53 29.35
AT1G64583.1 Thale cress mitochondrion 30.12 29.3
CDY33753 Canola mitochondrion 26.1 29.28
Bra027026.1-P Field mustard mitochondrion 30.72 29.25
AT1G63150.1 Thale cress mitochondrion 36.95 29.25
AT1G06580.1 Thale cress mitochondrion 29.32 29.2
CDY65983 Canola mitochondrion 24.7 29.15
AT1G62670.1 Thale cress mitochondrion 36.75 29.05
AT5G41170.1 Thale cress mitochondrion 30.72 29.03
CDY35831 Canola mitochondrion 29.92 28.93
AT1G62590.1 Thale cress mitochondrion 36.75 28.86
AT1G62680.2 Thale cress plastid 31.73 28.83
AT1G62914.1 Thale cress mitochondrion 30.52 28.79
CDY49646 Canola mitochondrion 28.92 28.74
AT1G63070.1 Thale cress mitochondrion 33.94 28.64
CDY34870 Canola mitochondrion 16.47 28.57
CDY46912 Canola mitochondrion 28.31 28.54
CDY34375 Canola mitochondrion 29.12 28.05
CDY31271 Canola mitochondrion 27.31 27.98
AT1G64580.1 Thale cress mitochondrion 28.92 27.53
Bra027658.1-P Field mustard cytosol, mitochondrion 29.72 27.26
CDY66358 Canola mitochondrion 21.08 26.92
CDY28348 Canola mitochondrion, plastid 32.13 26.76
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 15.86 26.6
CDY29251 Canola mitochondrion 26.71 26.23
Bra027726.1-P Field mustard mitochondrion 24.7 26.11
CDY47835 Canola mitochondrion 22.89 26.09
CDY16032 Canola mitochondrion 21.29 25.98
CDY25519 Canola mitochondrion, plastid 33.33 25.98
TraesCS2B01G126900.1 Wheat cytosol 19.88 25.92
AT4G26800.2 Thale cress mitochondrion, plastid 26.51 25.68
Bra026401.1-P Field mustard plastid 27.11 25.23
CDX89301 Canola plastid 27.11 25.23
CDX68680 Canola mitochondrion 23.29 25.11
HORVU1Hr1G018190.2 Barley cytosol 14.26 24.91
TraesCS6B01G127200.1 Wheat cytosol 16.87 24.42
TraesCS1A01G067700.1 Wheat extracellular 16.47 24.33
CDY25522 Canola mitochondrion, plastid 21.69 24.16
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 18.07 23.81
CDY16003 Canola cytosol, plastid 18.47 23.53
HORVU1Hr1G011250.1 Barley cytosol 13.86 23.39
TraesCS1D01G058000.1 Wheat cytosol 18.88 23.15
Zm00001d018982_P001 Maize mitochondrion 16.27 23.14
Os10t0501700-00 Rice cytosol 20.88 22.91
TraesCS6D01G083300.1 Wheat mitochondrion 20.48 22.87
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 22.69 22.47
CDY15970 Canola cytosol 4.22 22.34
AT1G64100.2 Thale cress cytosol 35.74 22.08
TraesCS6A01G015000.1 Wheat mitochondrion 18.27 21.93
Os10t0495100-01 Rice cytosol, mitochondrion 20.28 21.91
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 21.29 21.9
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 22.29 21.72
TraesCSU01G090200.1 Wheat cytosol 19.28 21.72
Os10t0497366-00 Rice mitochondrion 17.47 21.7
OQU88594 Sorghum cytosol 22.49 21.46
TraesCS6D01G017800.1 Wheat cytosol 23.09 21.42
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 21.69 21.39
Os08t0248400-01 Rice mitochondrion 18.88 21.36
HORVU6Hr1G017870.2 Barley mitochondrion 12.85 21.33
TraesCS1D01G058400.1 Wheat cytosol 21.89 21.16
TraesCSU01G089700.1 Wheat mitochondrion 20.48 21.16
TraesCS6D01G083100.1 Wheat cytosol 20.68 21.02
TraesCS1B01G038200.1 Wheat mitochondrion 26.51 20.85
CDY66357 Canola cytosol 15.86 20.84
KXG34536 Sorghum mitochondrion 23.9 20.8
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 19.88 20.58
TraesCS6D01G076500.1 Wheat plastid 18.67 20.53
TraesCS6D01G083400.1 Wheat mitochondrion 20.28 20.49
TraesCS6B01G127500.1 Wheat cytosol 20.08 20.41
EER95949 Sorghum mitochondrion 27.11 20.36
CDY34370 Canola cytosol 33.53 20.34
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 27.11 20.33
TraesCS1B01G092600.1 Wheat plastid 21.08 20.31
TraesCS6A01G083000.1 Wheat cytosol 18.47 20.18
TraesCS1B01G072700.1 Wheat cytosol 20.48 20.0
CDX81633 Canola extracellular, golgi, plasma membrane 36.35 19.91
TraesCS7D01G231400.1 Wheat cytosol, plastid 16.06 19.85
HORVU6Hr1G014310.1 Barley mitochondrion 27.31 19.8
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 15.06 19.79
TraesCS1B01G038400.1 Wheat cytosol 24.1 19.74
Os10t0499500-01 Rice mitochondrion 19.88 19.57
TraesCS6B01G021600.1 Wheat mitochondrion 28.11 19.55
TraesCS1B01G073200.1 Wheat cytosol 11.85 19.47
TraesCS1D01G055300.1 Wheat cytosol 24.1 19.42
TraesCS7B01G469500.1 Wheat cytosol 21.89 19.39
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 12.65 19.38
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 17.07 19.36
TraesCS1D01G056700.1 Wheat cytosol 23.49 19.28
TraesCS1A01G054800.1 Wheat cytosol 22.49 19.24
TraesCS1B01G085400.1 Wheat cytosol 24.7 19.19
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 27.51 19.19
TraesCS1B01G039700.1 Wheat cytosol 23.29 19.08
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 16.47 18.94
Os08t0107800-01 Rice mitochondrion 23.69 18.91
HORVU0Hr1G035310.1 Barley cytosol 22.09 18.9
TraesCS1B01G073100.1 Wheat cytosol 22.89 18.81
OQU82836 Sorghum cytosol 23.09 18.79
TraesCS6B01G114300.1 Wheat cytosol 14.66 18.77
TraesCS1A01G031700.1 Wheat plastid 27.91 18.76
TraesCS6D01G047700.1 Wheat mitochondrion 25.9 18.67
EES07882 Sorghum cytosol 29.12 18.66
KXG27690 Sorghum cytosol, plastid 27.31 18.6
OQU82831 Sorghum cytosol 22.89 18.6
TraesCS6D01G290900.1 Wheat mitochondrion 27.31 18.55
TraesCSU01G089800.1 Wheat mitochondrion 13.05 18.52
TraesCS1B01G072300.1 Wheat plastid 21.08 18.49
TraesCS6A01G014600.1 Wheat cytosol 14.66 18.48
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 26.51 18.46
TraesCS1A01G031600.1 Wheat cytosol 24.5 18.43
TraesCS6D01G017700.1 Wheat plastid 19.68 18.35
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 26.31 18.32
EES09203 Sorghum cytosol 29.32 18.3
TraesCS2D01G532500.1 Wheat plastid 24.9 18.24
TraesCS1B01G086000.1 Wheat plastid 25.1 18.22
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 25.5 18.22
OQU82823 Sorghum cytosol 29.12 18.19
OQU82827 Sorghum cytosol 29.12 18.19
Os08t0107700-01 Rice cytosol, mitochondrion 13.65 18.18
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 9.24 18.18
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 25.9 18.04
OQU80148 Sorghum mitochondrion 26.31 18.02
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 24.3 17.98
TraesCS2A01G531000.1 Wheat golgi 24.5 17.97
OQU82856 Sorghum cytosol 27.11 17.95
TraesCS1D01G076500.1 Wheat mitochondrion 23.9 17.92
Bra027656.1-P Field mustard cytosol 33.73 17.85
TraesCS1B01G072400.1 Wheat cytosol 24.9 17.84
KXG35774 Sorghum cytosol, mitochondrion 16.87 17.76
TraesCS1B01G315500.1 Wheat mitochondrion 11.45 17.76
TraesCS2D01G533000.1 Wheat cytosol, extracellular 23.49 17.75
Zm00001d009733_P001 Maize cytosol 28.31 17.74
TraesCS2D01G532400.1 Wheat cytosol 21.69 17.68
Os10t0497300-01 Rice mitochondrion 28.11 17.63
TraesCS2A01G526200.1 Wheat golgi 24.1 17.62
TraesCS1A01G067000.1 Wheat mitochondrion 25.3 17.6
KXG19780 Sorghum cytosol 20.88 17.6
TraesCS1B01G075300.1 Wheat cytosol 21.08 17.59
TraesCS2B01G560300.1 Wheat cytosol 20.08 17.57
TraesCS1B01G085900.1 Wheat mitochondrion 28.71 17.57
TraesCS2B01G559900.1 Wheat cytosol 19.08 17.53
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 22.49 17.53
TraesCS1B01G084800.1 Wheat cytosol 16.27 17.46
TraesCS1A01G054500.1 Wheat mitochondrion 27.31 17.44
TraesCS1A01G057300.1 Wheat cytosol 25.1 17.41
Os10t0495200-01 Rice mitochondrion 27.31 17.39
TraesCS1A01G067600.1 Wheat mitochondrion 28.31 17.34
TraesCS1B01G038500.1 Wheat mitochondrion 27.51 17.34
TraesCS1D01G056200.1 Wheat mitochondrion 28.71 17.33
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 24.3 17.31
TraesCS1B01G085300.1 Wheat mitochondrion 27.51 17.3
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 27.51 17.3
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 16.67 17.29
Zm00001d007534_P001 Maize plastid 26.91 17.25
TraesCS2A01G531100.1 Wheat cytosol 19.68 17.22
TraesCS1D01G068900.1 Wheat mitochondrion 28.11 17.22
OQU82832 Sorghum cytosol 9.84 17.13
KXG28799 Sorghum plastid 26.1 17.11
TraesCS1A01G067400.1 Wheat mitochondrion 28.31 17.09
Zm00001d007555_P001 Maize plastid 27.91 17.08
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 26.91 17.03
Bra016758.1-P Field mustard plastid 39.56 17.0
Zm00001d007548_P001 Maize plastid 27.71 16.95
Zm00001d007559_P001 Maize plastid 27.71 16.89
TraesCS1D01G068500.1 Wheat mitochondrion 27.51 16.87
TraesCS1B01G039100.1 Wheat mitochondrion 26.51 16.86
Zm00001d007531_P001 Maize plastid 27.51 16.83
TraesCS1A01G073800.1 Wheat mitochondrion 11.24 16.82
TraesCS1D01G068400.1 Wheat mitochondrion 27.71 16.77
TraesCS2D01G532100.1 Wheat mitochondrion 23.29 16.76
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 26.1 16.67
TraesCS1D01G068700.1 Wheat cytosol 14.66 16.63
TraesCS1B01G071600.1 Wheat mitochondrion 28.31 16.63
TraesCS6A01G311600.1 Wheat mitochondrion 27.91 16.63
TraesCS2D01G532300.1 Wheat plastid 25.9 16.58
TraesCS1D01G057800.1 Wheat mitochondrion 12.05 16.53
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 27.51 16.51
TraesCS1D01G069100.1 Wheat mitochondrion 21.29 16.49
HORVU6Hr1G002890.6 Barley cytosol, plastid 26.31 16.48
TraesCS1D01G068600.1 Wheat plastid 11.24 16.47
TraesCS1D01G068800.1 Wheat plastid 26.91 16.42
HORVU6Hr1G076780.7 Barley mitochondrion 27.11 16.38
TraesCS1A01G054700.2 Wheat mitochondrion 26.71 16.38
TraesCS1A01G073700.1 Wheat cytosol 12.45 16.1
TraesCS1B01G039200.1 Wheat mitochondrion 25.3 16.07
TraesCS1D01G076900.1 Wheat plastid 21.08 15.98
TraesCS2D01G532600.1 Wheat plastid 24.9 15.98
HORVU1Hr1G004750.6 Barley plastid 25.5 15.91
HORVU1Hr1G010970.1 Barley mitochondrion 26.1 15.74
HORVU1Hr1G014040.1 Barley mitochondrion 26.31 15.73
HORVU0Hr1G031920.1 Barley plastid 27.11 15.7
TraesCS1A01G055800.1 Wheat mitochondrion 24.3 15.69
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 24.1 15.67
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 22.49 15.62
TraesCS2A01G530600.1 Wheat cytosol 23.9 15.56
Os08t0110200-01 Rice mitochondrion 24.9 15.54
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 10.64 15.5
TraesCS1B01G072900.2 Wheat mitochondrion 27.11 15.46
TraesCS1B01G092500.1 Wheat mitochondrion 24.3 15.45
TraesCS2B01G560700.1 Wheat plastid 23.9 15.43
Os10t0497432-01 Rice mitochondrion 8.23 15.41
Os04t0349600-01 Rice plastid 11.85 15.25
CDY31277 Canola plastid 29.32 15.22
HORVU1Hr1G013810.1 Barley plastid 25.5 15.14
HORVU1Hr1G014060.1 Barley plastid 26.91 15.06
HORVU1Hr1G011160.2 Barley cytosol, plastid 26.91 14.97
HORVU1Hr1G011150.1 Barley cytosol, plastid 26.31 14.84
HORVU1Hr1G010890.5 Barley cytosol 26.51 14.7
Os04t0351333-00 Rice cytosol 25.9 14.68
TraesCS1D01G076700.1 Wheat cytosol 9.84 14.67
OQU82833 Sorghum cytosol 13.05 14.51
TraesCS1A01G073600.1 Wheat mitochondrion 11.24 14.29
TraesCS1A01G056000.1 Wheat cytosol 11.45 14.18
Zm00001d009735_P001 Maize cytosol 27.51 14.08
TraesCS6B01G341800.2 Wheat cytosol 11.24 14.04
OQU82834 Sorghum cytosol 27.11 14.02
HORVU1Hr1G011300.3 Barley plastid 25.7 13.91
TraesCS1A01G067800.1 Wheat cytosol 9.84 13.1
TraesCS6B01G129100.1 Wheat cytosol, plastid 7.43 12.85
TraesCS1D01G058500.1 Wheat plastid 14.66 12.81
TraesCS1D01G033000.1 Wheat cytosol 10.24 12.62
TraesCS1D01G067600.1 Wheat cytosol 9.24 12.6
HORVU1Hr1G011400.44 Barley plastid 15.46 12.5
TraesCS1D01G076400.1 Wheat cytosol 9.04 12.4
TraesCS1B01G038600.1 Wheat cytosol 8.84 12.12
CDY34680 Canola cytosol 21.49 11.73
TraesCS1A01G055600.1 Wheat cytosol 7.43 11.38
TraesCS1D01G057700.1 Wheat cytosol 7.23 11.08
OQU88581 Sorghum cytosol 24.1 11.04
TraesCS1A01G074000.1 Wheat mitochondrion 6.22 10.95
TraesCS1B01G038300.1 Wheat plastid 11.45 10.44
TraesCS1A01G066600.1 Wheat mitochondrion 5.42 10.27
TraesCS2D01G532200.1 Wheat cytosol 5.82 9.9
TraesCS1D01G056600.1 Wheat mitochondrion 3.82 9.41
TraesCS1A01G055500.1 Wheat mitochondrion 4.02 9.22
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 3.82 8.33
CDY21063 Canola plastid 1.0 0.91
Protein Annotations
EnsemblPlants:PGSC0003DMT400008757EnsemblPlantsGene:PGSC0003DMG400003401Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149PANTHER:PTHR44149:SF1
PFAM:PF12854PFAM:PF13041PFscan:PS51375PGSC:PGSC0003DMG400003401SEG:segSUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI0002954179UniProt:M0ZV12MapMan:35.1::
Description
PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003401]
Coordinates
chr6:+:2301773..2303364
Molecular Weight (calculated)
56677.7 Da
IEP (calculated)
6.080
GRAVY (calculated)
0.017
Length
498 amino acids
Sequence
(BLAST)
001: MVRMKPLPSV VDFSKLFKNM ISMKHYSTVV SLFREMQILG ILIDGFILNS VINSYCLMHH AHFGFSVLPI YLKNGITFDV VTFTTLLRGI FDENKVRDAV
101: ELFKKLVREK ICEPNEVMYA TVMNGLSKSG HTQKTLSLLR LMEQGNTEPN IYIYNIVIDS LCKDGNSDTA INFLNEMKQK GIHPDILTYN SLIDGLYGLC
201: KEGKVEDAEE VMKHMVEKGI QPNVITYNMI MDGYCLCGQL DRARRIFDIL IDKGIEPNIF SYNILINGYC KKKKLDEAMQ LFCEISQKGL KPDIVTYNTI
301: LQGLFEVGRI GVAKQLFVEM VSTGPAPDLY SYCTLLDGYF KYGLVEEAMS LFNKLERKTE NIDIISYNII INGLCKNGEL DKAHAIFEKL SSMGLLLNVR
401: IYTTMITGFC LQGLLDEAKD MLRKMEENNC LPDNVTYNVI VQGYLRCRKI NEMVTFMKEM TGRGFSFDAT TAEFLVEAIS ENPSIVDMLP ELHSEIKK
Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)
001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.