Factsheet for AT1G62720.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036649.1-P	Field mustard	cytosol	59.38	73.66
CDY39810	Canola	cytosol	59.18	73.4
CDY03257	Canola	cytosol	58.76	72.89
AT1G62680.2	Thale cress	plastid	59.18	52.37
AT1G64580.1	Thale cress	mitochondrion	56.08	52.01
AT5G16640.1	Thale cress	mitochondrion	54.02	51.98
AT3G16710.1	Thale cress	mitochondrion	54.02	51.68
AT1G06580.1	Thale cress	mitochondrion	51.55	50.0
AT5G41170.1	Thale cress	mitochondrion	53.81	49.53
AT1G64583.1	Thale cress	mitochondrion	50.93	48.24
AT1G63400.1	Thale cress	cytosol, plastid	57.32	48.18
AT1G62914.1	Thale cress	mitochondrion	50.52	46.4
AT1G63330.2	Thale cress	cytosol	52.99	45.98
AT1G63130.1	Thale cress	mitochondrion	58.97	45.4
AT4G26800.2	Thale cress	mitochondrion, plastid	47.84	45.14
AT1G62930.1	Thale cress	plastid	57.11	44.04
AT1G62590.1	Thale cress	mitochondrion	56.7	43.38
AT1G62670.1	Thale cress	mitochondrion	56.08	43.17
AT1G63150.1	Thale cress	mitochondrion	55.88	43.08
AT1G62910.1	Thale cress	mitochondrion	55.88	42.88
AT1G63080.3	Thale cress	mitochondrion	54.02	42.67
AT1G63070.1	Thale cress	mitochondrion	50.72	41.69
AT3G22470.1	Thale cress	cytosol, mitochondrion	49.28	38.61
AT1G12300.1	Thale cress	mitochondrion	49.69	37.83
AT1G12620.1	Thale cress	cytosol, mitochondrion	48.04	37.52
VIT_12s0028g02320.t01	Wine grape	mitochondrion	36.49	37.11
AT1G12775.1	Thale cress	cytosol, mitochondrion	48.45	36.49
AT1G12700.2	Thale cress	cytosol	45.77	35.92
KRH70370	Soybean	cytosol	37.32	33.27
VIT_14s0081g00270.t01	Wine grape	plastid	38.35	32.07
Solyc06g005220.2.1	Tomato	cytosol	26.8	32.02
Solyc06g007280.2.1	Tomato	cytosol	16.7	31.76
KRH49698	Soybean	cytosol	37.32	31.75
VIT_14s0030g02280.t01	Wine grape	plastid	36.08	31.19
KRH09256	Soybean	mitochondrion	35.88	31.13
VIT_14s0081g00120.t01	Wine grape	plastid	37.32	31.05
PGSC0003DMT400008759	Potato	cytosol	20.41	31.03
VIT_14s0081g00110.t01	Wine grape	cytosol	31.34	30.96
KRH42744	Soybean	mitochondrion	38.97	30.93
KRH58843	Soybean	nucleus	38.76	30.77
PGSC0003DMT400008757	Potato	cytosol	31.34	30.52
KRH38755	Soybean	mitochondrion	37.32	30.47
PGSC0003DMT400025074	Potato	cytosol	34.43	30.25
PGSC0003DMT400052977	Potato	cytosol	23.92	29.82
Solyc06g007810.1.1	Tomato	cytosol	16.29	29.48
PGSC0003DMT400053556	Potato	mitochondrion	27.84	29.41
KRH75045	Soybean	mitochondrion	36.08	29.31
KRH75063	Soybean	mitochondrion, plastid	36.29	29.14
Solyc06g007300.1.1	Tomato	extracellular	35.46	29.05
PGSC0003DMT400056663	Potato	plastid	34.85	28.74
PGSC0003DMT400056665	Potato	mitochondrion	34.85	28.69
PGSC0003DMT400008760	Potato	mitochondrion	34.64	28.67
KRH75048	Soybean	mitochondrion	35.88	28.62
PGSC0003DMT400025087	Potato	endoplasmic reticulum	28.66	28.08
Solyc06g007740.1.1	Tomato	cytosol	34.02	27.97
PGSC0003DMT400052971	Potato	mitochondrion	34.02	27.82
VIT_14s0081g00280.t01	Wine grape	mitochondrion	36.49	27.7
PGSC0003DMT400053185	Potato	mitochondrion	33.4	27.46
PGSC0003DMT400025067	Potato	cytosol	25.98	26.47
PGSC0003DMT400015293	Potato	mitochondrion	32.58	25.9
PGSC0003DMT400015298	Potato	mitochondrion	32.58	25.9
AT1G64100.2	Thale cress	cytosol	42.89	25.81
PGSC0003DMT400053182	Potato	cytosol	31.75	25.71
Solyc04g080120.1.1	Tomato	extracellular	31.96	25.33
TraesCS2B01G126900.1	Wheat	cytosol	19.38	24.61
VIT_14s0030g02260.t01	Wine grape	cytosol	22.06	24.15
HORVU1Hr1G011250.1	Barley	cytosol	14.64	24.07
Os10t0495100-01	Rice	cytosol, mitochondrion	22.06	23.21
OQU82832	Sorghum	cytosol	13.61	23.08
Zm00001d018982_P001	Maize	mitochondrion	16.49	22.86
KXG34536	Sorghum	mitochondrion	26.8	22.73
Os08t0248400-01	Rice	mitochondrion	20.62	22.73
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	17.53	22.49
Os10t0501700-00	Rice	cytosol	21.03	22.47
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.61	22.22
Os10t0497366-00	Rice	mitochondrion	18.35	22.19
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	22.06	22.11
TraesCS6D01G083300.1	Wheat	mitochondrion	20.21	21.97
Os08t0107800-01	Rice	mitochondrion	28.25	21.96
HORVU1Hr1G018190.2	Barley	cytosol	12.78	21.75
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	22.89	21.72
TraesCS6D01G083400.1	Wheat	mitochondrion	22.06	21.7
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	21.44	21.62
TraesCSU01G089700.1	Wheat	mitochondrion	21.44	21.58
TraesCS1D01G058000.1	Wheat	cytosol	17.94	21.43
TraesCS6B01G127200.1	Wheat	cytosol	15.05	21.22
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	21.86	21.07
TraesCS1A01G067700.1	Wheat	extracellular	14.64	21.07
TraesCS6A01G015000.1	Wheat	mitochondrion	17.94	20.96
Os10t0499500-01	Rice	mitochondrion	21.65	20.75
HORVU6Hr1G017870.2	Barley	mitochondrion	12.78	20.67
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	21.44	20.59
TraesCSU01G090200.1	Wheat	cytosol	18.76	20.59
EER95949	Sorghum	mitochondrion	28.04	20.51
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	18.56	20.5
OQU88594	Sorghum	cytosol	22.06	20.5
TraesCS1B01G038200.1	Wheat	mitochondrion	26.6	20.38
TraesCS6B01G127500.1	Wheat	cytosol	20.21	20.0
TraesCS6D01G083100.1	Wheat	cytosol	20.21	20.0
Os08t0107700-01	Rice	cytosol, mitochondrion	15.05	19.52
TraesCS7D01G231400.1	Wheat	cytosol, plastid	16.08	19.35
TraesCS1D01G068600.1	Wheat	plastid	13.4	19.12
TraesCS6A01G083000.1	Wheat	cytosol	17.53	18.64
KXG27690	Sorghum	cytosol, plastid	28.04	18.6
TraesCS1B01G092600.1	Wheat	plastid	19.79	18.57
TraesCSU01G089800.1	Wheat	mitochondrion	13.4	18.52
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	16.49	18.48
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	12.37	18.46
TraesCS6D01G076500.1	Wheat	plastid	17.11	18.32
TraesCS1B01G072700.1	Wheat	cytosol	19.18	18.24
TraesCS7B01G469500.1	Wheat	cytosol	21.03	18.15
OQU82856	Sorghum	cytosol	28.04	18.09
TraesCS1D01G058400.1	Wheat	cytosol	19.18	18.06
TraesCS6D01G017700.1	Wheat	plastid	19.79	17.98
TraesCS1A01G031600.1	Wheat	cytosol	24.54	17.98
TraesCS1B01G072300.1	Wheat	plastid	21.03	17.96
OQU80148	Sorghum	mitochondrion	26.8	17.88
Os10t0495200-01	Rice	mitochondrion	28.66	17.77
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	26.19	17.76
TraesCS1B01G315500.1	Wheat	mitochondrion	11.75	17.76
TraesCS6B01G021600.1	Wheat	mitochondrion	26.19	17.74
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	13.81	17.68
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	25.98	17.65
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	25.98	17.62
EES09203	Sorghum	cytosol	28.87	17.54
TraesCS1A01G031700.1	Wheat	plastid	26.8	17.54
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	17.32	17.5
TraesCS6D01G047700.1	Wheat	mitochondrion	24.74	17.37
HORVU6Hr1G014310.1	Barley	mitochondrion	24.54	17.32
TraesCS6D01G290900.1	Wheat	mitochondrion	25.98	17.19
TraesCS6D01G017800.1	Wheat	cytosol	18.56	16.76
KXG19780	Sorghum	cytosol	20.41	16.75
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	24.54	16.64
TraesCS2A01G531000.1	Wheat	golgi	23.3	16.64
Os10t0497300-01	Rice	mitochondrion	27.22	16.62
TraesCS1B01G038400.1	Wheat	cytosol	20.82	16.61
Zm00001d009733_P001	Maize	cytosol	27.22	16.6
OQU82823	Sorghum	cytosol	27.22	16.56
OQU82827	Sorghum	cytosol	27.22	16.56
HORVU0Hr1G035310.1	Barley	cytosol	19.79	16.49
TraesCS1B01G039100.1	Wheat	mitochondrion	26.6	16.48
EES07882	Sorghum	cytosol	26.39	16.47
TraesCS6B01G114300.1	Wheat	cytosol	13.2	16.45
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	11.55	16.37
TraesCS2D01G532400.1	Wheat	cytosol	20.62	16.37
TraesCS1D01G056600.1	Wheat	mitochondrion	6.8	16.34
TraesCS1B01G039700.1	Wheat	cytosol	20.41	16.28
TraesCS1A01G073800.1	Wheat	mitochondrion	11.13	16.22
TraesCS1B01G038500.1	Wheat	mitochondrion	26.39	16.2
TraesCS6A01G014600.1	Wheat	cytosol	13.2	16.2
TraesCS1B01G086000.1	Wheat	plastid	22.89	16.18
TraesCS2D01G532500.1	Wheat	plastid	22.68	16.18
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	26.19	16.14
KXG28799	Sorghum	plastid	25.15	16.05
TraesCS1D01G076900.1	Wheat	plastid	21.65	15.98
TraesCS2B01G560700.1	Wheat	plastid	25.36	15.95
TraesCS1B01G039200.1	Wheat	mitochondrion	25.77	15.94
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	22.89	15.88
TraesCS1D01G069100.1	Wheat	mitochondrion	21.03	15.86
TraesCS2A01G526200.1	Wheat	golgi	22.27	15.86
TraesCS2A01G530600.1	Wheat	cytosol	24.95	15.82
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	8.25	15.81
TraesCS2D01G532300.1	Wheat	plastid	25.36	15.81
Os04t0349600-01	Rice	plastid	12.58	15.76
TraesCS2D01G532600.1	Wheat	plastid	25.15	15.72
Zm00001d007534_P001	Maize	plastid	25.15	15.7
OQU82836	Sorghum	cytosol	19.79	15.69
TraesCS1D01G068800.1	Wheat	plastid	26.39	15.69
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	21.44	15.66
OQU82831	Sorghum	cytosol	19.79	15.66
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	25.57	15.66
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	21.24	15.63
TraesCS2D01G532100.1	Wheat	mitochondrion	22.27	15.61
TraesCS1B01G072400.1	Wheat	cytosol	22.27	15.54
HORVU6Hr1G076780.7	Barley	mitochondrion	26.39	15.53
TraesCS1D01G057800.1	Wheat	mitochondrion	11.55	15.43
Os10t0497432-01	Rice	mitochondrion	8.45	15.41
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	24.33	15.4
TraesCS1D01G068500.1	Wheat	mitochondrion	25.77	15.39
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	24.74	15.38
Zm00001d007548_P001	Maize	plastid	25.77	15.36
Zm00001d007559_P001	Maize	plastid	25.77	15.3
TraesCS2A01G531100.1	Wheat	cytosol	17.94	15.29
HORVU1Hr1G004750.6	Barley	plastid	25.15	15.29
TraesCS1B01G085400.1	Wheat	cytosol	20.0	15.13
TraesCS2B01G560300.1	Wheat	cytosol	17.73	15.11
Os08t0110200-01	Rice	mitochondrion	24.74	15.04
TraesCS1A01G054700.2	Wheat	mitochondrion	25.15	15.02
KXG35774	Sorghum	cytosol, mitochondrion	14.64	15.01
Zm00001d007555_P001	Maize	plastid	25.15	14.99
TraesCS6A01G311600.1	Wheat	mitochondrion	25.77	14.95
TraesCS1D01G056200.1	Wheat	mitochondrion	25.36	14.91
HORVU0Hr1G031920.1	Barley	plastid	26.39	14.88
Zm00001d007531_P001	Maize	plastid	24.95	14.86
TraesCS1D01G056700.1	Wheat	cytosol	18.56	14.83
TraesCS1B01G085300.1	Wheat	mitochondrion	24.12	14.77
TraesCS1A01G067600.1	Wheat	mitochondrion	24.74	14.76
TraesCS1A01G054500.1	Wheat	mitochondrion	23.71	14.74
TraesCS1B01G071600.1	Wheat	mitochondrion	25.77	14.74
TraesCS1D01G055300.1	Wheat	cytosol	18.76	14.72
HORVU6Hr1G002890.6	Barley	cytosol, plastid	24.12	14.72
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.38	14.71
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	20.41	14.71
HORVU1Hr1G010970.1	Barley	mitochondrion	24.95	14.65
TraesCS1B01G085900.1	Wheat	mitochondrion	24.54	14.62
TraesCS1B01G073200.1	Wheat	cytosol	9.07	14.52
TraesCS1B01G072900.2	Wheat	mitochondrion	25.98	14.43
HORVU1Hr1G014040.1	Barley	mitochondrion	24.74	14.41
TraesCS1D01G068900.1	Wheat	mitochondrion	24.12	14.39
TraesCS2B01G559900.1	Wheat	cytosol	16.08	14.39
TraesCS1A01G067000.1	Wheat	mitochondrion	21.24	14.39
TraesCS1B01G073100.1	Wheat	cytosol	17.94	14.36
TraesCS1A01G067400.1	Wheat	mitochondrion	24.33	14.3
HORVU1Hr1G010890.5	Barley	cytosol	26.39	14.25
TraesCS1B01G075300.1	Wheat	cytosol	17.53	14.24
TraesCS1A01G057300.1	Wheat	cytosol	21.03	14.21
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	24.12	14.1
TraesCS1A01G054800.1	Wheat	cytosol	16.91	14.09
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	6.6	14.04
HORVU1Hr1G011160.2	Barley	cytosol, plastid	25.57	13.85
TraesCS1D01G068400.1	Wheat	mitochondrion	23.51	13.85
HORVU1Hr1G011150.1	Barley	cytosol, plastid	25.15	13.82
TraesCS1A01G055800.1	Wheat	mitochondrion	21.65	13.62
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	19.38	13.49
HORVU1Hr1G013810.1	Barley	plastid	23.3	13.47
TraesCS1B01G084800.1	Wheat	cytosol	12.78	13.36
Zm00001d009735_P001	Maize	cytosol	26.8	13.36
TraesCS1B01G092500.1	Wheat	mitochondrion	21.44	13.28
HORVU1Hr1G011300.3	Barley	plastid	25.15	13.26
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	19.38	13.11
TraesCS1A01G055500.1	Wheat	mitochondrion	5.77	12.9
TraesCS1D01G076500.1	Wheat	mitochondrion	17.53	12.8
TraesCS1D01G068700.1	Wheat	cytosol	11.55	12.76
Os04t0351333-00	Rice	cytosol	23.09	12.74
TraesCS1A01G074000.1	Wheat	mitochondrion	7.42	12.72
HORVU1Hr1G014060.1	Barley	plastid	23.3	12.7
OQU82834	Sorghum	cytosol	24.54	12.36
OQU82833	Sorghum	cytosol	11.13	12.05
TraesCS6B01G129100.1	Wheat	cytosol, plastid	7.01	11.81
TraesCS1A01G066600.1	Wheat	mitochondrion	6.39	11.79
TraesCS1D01G076700.1	Wheat	cytosol	8.04	11.68
TraesCS1D01G033000.1	Wheat	cytosol	9.69	11.63
TraesCS1B01G038300.1	Wheat	plastid	12.58	11.17
TraesCS1A01G056000.1	Wheat	cytosol	9.07	10.95
TraesCS1D01G058500.1	Wheat	plastid	12.78	10.88
TraesCS6B01G341800.2	Wheat	cytosol	8.87	10.78
TraesCS1A01G073700.1	Wheat	cytosol	8.45	10.65
TraesCS1B01G038600.1	Wheat	cytosol	7.84	10.47
HORVU1Hr1G011400.44	Barley	plastid	12.78	10.06
TraesCS1A01G073600.1	Wheat	mitochondrion	8.04	9.95
OQU88581	Sorghum	cytosol	21.03	9.38
TraesCS1D01G067600.1	Wheat	cytosol	7.01	9.32
TraesCS1A01G067800.1	Wheat	cytosol	6.39	8.29
TraesCS1D01G076400.1	Wheat	cytosol	5.57	7.44
TraesCS1A01G055600.1	Wheat	cytosol	4.74	7.08
TraesCS1D01G057700.1	Wheat	cytosol	4.54	6.77
TraesCS2D01G532200.1	Wheat	cytosol	3.51	5.8

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:842570	UniProt:A0A178WIB7	ProteinID:AAF19537.1	ProteinID:AEE33997.1
EMBL:AK221583	ArrayExpress:AT1G62720	EnsemblPlantsGene:AT1G62720	RefSeq:AT1G62720	TAIR:AT1G62720	RefSeq:AT1G62720-TAIR-G
EnsemblPlants:AT1G62720.1	TAIR:AT1G62720.1	Unigene:At.71290	EMBL:BT012561	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0006397	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009791	GO:GO:0009845
GO:GO:0009987	GO:GO:0016787	GO:GO:0080156	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990
RefSeq:NP_176459.2	ProteinID:OAP17275.1	PFAM:PF12854	PFAM:PF13041	PO:PO:0000003	PO:PO:0007131
PO:PO:0009046	PO:PO:0009047	PO:PO:0025034	PFscan:PS51375	PANTHER:PTHR44149	PANTHER:PTHR44149:SF1
InterPro:Pentatricopeptide_repeat	UniProt:Q9SI78	SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00000AA99E

Description

Pentatricopeptide repeat-containing protein At1g62720 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI78]

Coordinates

chr1:+:23227532..23229150

Molecular Weight (calculated)

55174.6 Da

IEP (calculated)

8.052

GRAVY (calculated)

0.011

Length

485 amino acids

Sequence
(BLAST)

001: MRRSTTISIA SKANKFLNLC LLQKGNPVIV PFISRFWGRT FSTKRSSMNL EEEIDLFCKM IQSRPLPSIV DFSKVLSKIA KSKNYDLVIS LFHHMEVCGI
101: GHDLYSYNIV INCLCRCSRF VIALSVVGKM MKFGYEPDVV TVSSLINGFC QGNRVFDAID LVSKMEEMGF RPDVVIYNTI IDGSCKIGLV NDAVELFDRM
201: ERDGVRADAV TYNSLVAGLC CSGRWSDAAR LMRDMVMRDI VPNVITFTAV IDVFVKEGKF SEAMKLYEEM TRRCVDPDVF TYNSLINGLC MHGRVDEAKQ
301: MLDLMVTKGC LPDVVTYNTL INGFCKSKRV DEGTKLFREM AQRGLVGDTI TYNTIIQGYF QAGRPDAAQE IFSRMDSRPN IRTYSILLYG LCMNWRVEKA
401: LVLFENMQKS EIELDITTYN IVIHGMCKIG NVEDAWDLFR SLSCKGLKPD VVSYTTMISG FCRKRQWDKS DLLYRKMQED GLLPL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.