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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 PGSC0003DMT400037344 AT4G26630.1 25387881
AT1G62670.1 PGSC0003DMT400057390 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400052977 Potato cytosol 63.58 96.92
Solyc06g007300.1.1 Tomato extracellular 86.51 86.66
Solyc06g007280.2.1 Tomato cytosol 36.93 85.88
PGSC0003DMT400053185 Potato mitochondrion 75.55 75.93
PGSC0003DMT400025074 Potato cytosol 70.66 75.91
PGSC0003DMT400008757 Potato cytosol 63.41 75.5
PGSC0003DMT400056665 Potato mitochondrion 74.54 75.04
PGSC0003DMT400053182 Potato cytosol 74.87 74.12
PGSC0003DMT400025087 Potato endoplasmic reticulum 61.55 73.74
PGSC0003DMT400008759 Potato cytosol 39.29 73.04
PGSC0003DMT400053556 Potato mitochondrion 56.49 72.98
PGSC0003DMT400008760 Potato mitochondrion 71.84 72.7
PGSC0003DMT400056663 Potato plastid 72.01 72.62
PGSC0003DMT400025067 Potato cytosol 56.83 70.8
PGSC0003DMT400015293 Potato mitochondrion 50.42 49.02
PGSC0003DMT400015298 Potato mitochondrion 50.42 49.02
VIT_12s0028g02320.t01 Wine grape mitochondrion 34.4 42.77
VIT_14s0081g00270.t01 Wine grape plastid 41.32 42.24
VIT_14s0081g00120.t01 Wine grape plastid 39.63 40.31
KRH70370 Soybean cytosol 35.58 38.79
VIT_14s0081g00110.t01 Wine grape cytosol 32.04 38.7
Bra027636.1-P Field mustard cytosol 20.91 38.27
VIT_14s0081g00280.t01 Wine grape mitochondrion 40.64 37.72
CDY26589 Canola cytosol 4.38 37.68
CDY16110 Canola extracellular 25.8 37.32
CDY09968 Canola cytosol 18.38 37.07
Bra027029.1-P Field mustard mitochondrion 15.18 37.04
CDY51169 Canola cytosol 26.31 36.88
CDX71969 Canola cytosol 24.45 36.62
CDY06217 Canola cytosol 18.04 36.52
Bra031731.1-P Field mustard mitochondrion 31.2 36.42
Bra026884.1-P Field mustard cytosol 28.16 36.38
Bra026882.1-P Field mustard cytosol 32.72 36.33
CDY39810 Canola cytosol 23.95 36.32
CDX67634 Canola cytosol 25.8 36.17
CDY33797 Canola mitochondrion 31.2 36.13
KRH49698 Soybean cytosol 34.57 35.96
Bra036649.1-P Field mustard cytosol 23.61 35.81
CDY03257 Canola cytosol 23.61 35.81
CDY00489 Canola mitochondrion 35.24 35.67
CDY16002 Canola cytosol 18.55 35.37
CDY34688 Canola cytosol 21.59 35.36
VIT_14s0030g02280.t01 Wine grape plastid 33.39 35.29
AT1G63330.2 Thale cress cytosol 33.22 35.24
CDY34870 Canola mitochondrion 17.03 35.19
KRH75045 Soybean mitochondrion 35.24 35.01
AT1G12620.1 Thale cress cytosol, mitochondrion 36.59 34.94
CDY46909 Canola mitochondrion 17.2 34.93
AT5G16640.1 Thale cress mitochondrion 29.68 34.92
KRH09256 Soybean mitochondrion 32.88 34.88
Bra026958.1-P Field mustard mitochondrion 37.44 34.85
KRH38755 Soybean mitochondrion 34.91 34.85
AT1G12700.2 Thale cress cytosol 36.26 34.79
AT3G22470.1 Thale cress cytosol, mitochondrion 36.26 34.73
KRH75048 Soybean mitochondrion 35.58 34.7
AT1G12300.1 Thale cress mitochondrion 37.27 34.69
CDY31272 Canola mitochondrion 33.22 34.68
Bra028267.1-P Field mustard mitochondrion 36.59 34.66
Bra026957.1-P Field mustard mitochondrion 35.24 34.66
KRH75063 Soybean mitochondrion, plastid 35.24 34.6
KRH58843 Soybean nucleus 35.58 34.53
CDY26607 Canola cytosol 26.48 34.35
CDY34375 Canola mitochondrion 29.85 34.24
AT1G63150.1 Thale cress mitochondrion 36.26 34.18
CDX69436 Canola plastid 28.67 34.14
AT1G63130.1 Thale cress mitochondrion 36.26 34.13
CDY26565 Canola mitochondrion 32.72 34.09
Bra026971.1-P Field mustard mitochondrion 36.09 34.02
AT1G62720.1 Thale cress mitochondrion 27.82 34.02
CDY16033 Canola cytosol 8.6 34.0
Bra025516.1-P Field mustard cytosol, mitochondrion 27.32 33.96
AT1G62930.1 Thale cress plastid 35.92 33.86
KRH42744 Soybean mitochondrion 34.74 33.72
Bra006187.1-P Field mustard plastid 16.53 33.68
CDY26593 Canola cytosol 34.57 33.66
CDY25492 Canola mitochondrion 27.82 33.6
AT1G62680.2 Thale cress plastid 31.03 33.58
CDY08386 Canola cytosol 25.13 33.48
CDY46394 Canola mitochondrion 27.15 33.47
CDY48949 Canola mitochondrion 27.15 33.47
Bra027026.1-P Field mustard mitochondrion 29.51 33.46
CDY65983 Canola mitochondrion 23.78 33.41
Bra021192.1-P Field mustard plastid 28.33 33.33
Bra016762.1-P Field mustard mitochondrion 34.06 33.28
CDY68929 Canola mitochondrion 34.06 33.28
AT1G62910.1 Thale cress mitochondrion 35.41 33.23
AT1G62670.1 Thale cress mitochondrion 35.24 33.17
CDY16031 Canola cytosol 17.37 33.12
CDY34969 Canola mitochondrion 28.16 33.0
CDY46912 Canola mitochondrion 27.49 33.0
Bra026836.1-P Field mustard cytosol, mitochondrion 27.32 32.99
AT1G62590.1 Thale cress mitochondrion 35.24 32.97
Bra027658.1-P Field mustard cytosol, mitochondrion 30.19 32.97
Bra026954.1-P Field mustard mitochondrion 36.09 32.92
Bra036651.1-P Field mustard mitochondrion 29.68 32.9
AT1G63070.1 Thale cress mitochondrion 32.72 32.88
CDY35831 Canola mitochondrion 28.5 32.82
AT1G06580.1 Thale cress mitochondrion 27.66 32.8
AT1G12775.1 Thale cress cytosol, mitochondrion 35.41 32.61
AT3G16710.1 Thale cress mitochondrion 27.82 32.54
CDY26588 Canola extracellular 17.71 32.41
CDY49646 Canola mitochondrion 27.32 32.34
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 29.85 32.24
AT1G64583.1 Thale cress mitochondrion 27.82 32.23
VIT_14s0030g02260.t01 Wine grape cytosol 23.95 32.05
CDY31271 Canola mitochondrion 25.97 31.69
AT1G63080.3 Thale cress mitochondrion 32.72 31.6
CDY33753 Canola mitochondrion 23.61 31.53
AT1G64580.1 Thale cress mitochondrion 27.66 31.36
AT5G41170.1 Thale cress mitochondrion 27.82 31.31
CDY66358 Canola mitochondrion 20.57 31.28
AT1G63400.1 Thale cress cytosol, plastid 30.35 31.2
AT4G26800.2 Thale cress mitochondrion, plastid 26.48 30.54
CDY16032 Canola mitochondrion 20.74 30.15
AT1G62914.1 Thale cress mitochondrion 26.48 29.73
CDY47835 Canola mitochondrion 21.75 29.52
CDY16003 Canola cytosol, plastid 19.39 29.41
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 14.67 29.29
Bra027726.1-P Field mustard mitochondrion 22.77 28.66
CDY25519 Canola mitochondrion, plastid 30.69 28.48
HORVU1Hr1G011250.1 Barley cytosol 14.17 28.47
CDY25522 Canola mitochondrion, plastid 21.42 28.41
CDY29251 Canola mitochondrion 24.11 28.21
CDY28348 Canola mitochondrion, plastid 28.33 28.09
TraesCS2B01G126900.1 Wheat cytosol 17.71 27.49
CDX89301 Canola plastid 24.79 27.48
TraesCS1A01G067700.1 Wheat extracellular 15.51 27.3
Bra026401.1-P Field mustard plastid 24.62 27.29
HORVU1Hr1G018190.2 Barley cytosol 12.98 27.02
TraesCS6B01G127200.1 Wheat cytosol 15.51 26.74
CDX68680 Canola mitochondrion 20.74 26.62
Zm00001d018982_P001 Maize mitochondrion 15.68 26.57
Os10t0501700-00 Rice cytosol 19.56 25.55
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 16.19 25.4
TraesCS6D01G083300.1 Wheat mitochondrion 18.72 24.89
CDY66357 Canola cytosol 15.85 24.8
Os10t0495100-01 Rice cytosol, mitochondrion 19.22 24.73
HORVU6Hr1G017870.2 Barley mitochondrion 12.48 24.67
TraesCS1D01G058000.1 Wheat cytosol 16.86 24.63
Os10t0497366-00 Rice mitochondrion 16.53 24.44
TraesCS6B01G127500.1 Wheat cytosol 19.9 24.08
AT1G64100.2 Thale cress cytosol 32.72 24.07
TraesCSU01G090200.1 Wheat cytosol 17.88 23.98
TraesCS6D01G083100.1 Wheat cytosol 19.56 23.67
TraesCS6D01G083400.1 Wheat mitochondrion 19.56 23.53
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 19.06 23.35
TraesCS6D01G017800.1 Wheat cytosol 21.08 23.28
TraesCS6A01G015000.1 Wheat mitochondrion 16.19 23.13
Os08t0248400-01 Rice mitochondrion 17.03 22.95
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 16.86 22.78
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 19.39 22.77
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 19.39 22.5
CDY34370 Canola cytosol 31.03 22.41
TraesCSU01G089700.1 Wheat mitochondrion 18.21 22.41
CDY15970 Canola cytosol 3.54 22.34
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 18.89 22.27
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 18.04 22.25
TraesCS7B01G469500.1 Wheat cytosol 21.08 22.24
TraesCS1D01G068600.1 Wheat plastid 12.65 22.06
KXG34536 Sorghum mitochondrion 21.25 22.03
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 16.02 21.94
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 14.0 21.9
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 11.97 21.85
TraesCS7D01G231400.1 Wheat cytosol, plastid 14.84 21.84
TraesCS1B01G038200.1 Wheat mitochondrion 23.27 21.8
TraesCS1D01G058400.1 Wheat cytosol 18.89 21.75
TraesCS6A01G083000.1 Wheat cytosol 16.69 21.71
TraesCSU01G089800.1 Wheat mitochondrion 12.82 21.65
TraesCS6D01G076500.1 Wheat plastid 16.53 21.63
CDX81633 Canola extracellular, golgi, plasma membrane 33.05 21.56
HORVU0Hr1G035310.1 Barley cytosol 21.08 21.48
Os10t0499500-01 Rice mitochondrion 18.21 21.34
OQU88594 Sorghum cytosol 18.72 21.26
TraesCS6D01G017700.1 Wheat plastid 19.06 21.16
Os08t0107700-01 Rice cytosol, mitochondrion 13.32 21.12
TraesCS1B01G085400.1 Wheat cytosol 22.77 21.06
TraesCS1B01G038400.1 Wheat cytosol 21.59 21.05
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 25.3 21.01
TraesCS1B01G072700.1 Wheat cytosol 18.04 20.98
OQU82832 Sorghum cytosol 10.12 20.98
TraesCS1A01G054800.1 Wheat cytosol 20.57 20.96
HORVU6Hr1G014310.1 Barley mitochondrion 24.28 20.96
TraesCS6B01G021600.1 Wheat mitochondrion 25.3 20.95
TraesCS1D01G055300.1 Wheat cytosol 21.75 20.87
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 16.86 20.83
TraesCS1B01G072300.1 Wheat plastid 19.9 20.77
EER95949 Sorghum mitochondrion 23.1 20.66
TraesCS1D01G056700.1 Wheat cytosol 21.08 20.59
TraesCS1A01G031600.1 Wheat cytosol 22.93 20.54
TraesCS2A01G531000.1 Wheat golgi 23.27 20.32
TraesCS1B01G073100.1 Wheat cytosol 20.74 20.3
KXG35774 Sorghum cytosol, mitochondrion 16.19 20.3
EES07882 Sorghum cytosol 26.48 20.21
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 22.6 20.18
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 24.28 20.14
Zm00001d009733_P001 Maize cytosol 26.98 20.13
TraesCS1D01G057800.1 Wheat mitochondrion 12.31 20.11
TraesCS1A01G031700.1 Wheat plastid 25.13 20.11
TraesCS1B01G075300.1 Wheat cytosol 20.24 20.1
TraesCS2D01G532500.1 Wheat plastid 22.93 20.0
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 24.11 20.0
TraesCS1B01G315500.1 Wheat mitochondrion 10.79 19.94
TraesCS1B01G039700.1 Wheat cytosol 20.4 19.9
TraesCS2D01G533000.1 Wheat cytosol, extracellular 22.09 19.88
Bra027656.1-P Field mustard cytosol 31.53 19.87
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 23.95 19.86
TraesCS6D01G047700.1 Wheat mitochondrion 23.1 19.83
TraesCS6B01G114300.1 Wheat cytosol 12.98 19.79
TraesCS1B01G092600.1 Wheat plastid 17.2 19.73
TraesCS2B01G560300.1 Wheat cytosol 18.89 19.68
TraesCS1B01G085900.1 Wheat mitochondrion 26.98 19.66
TraesCS6D01G290900.1 Wheat mitochondrion 24.28 19.65
OQU82831 Sorghum cytosol 20.24 19.58
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 21.08 19.56
Os08t0107800-01 Rice mitochondrion 20.57 19.55
EES09203 Sorghum cytosol 26.31 19.55
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 22.93 19.51
TraesCS2D01G532100.1 Wheat mitochondrion 22.77 19.51
TraesCS1B01G073200.1 Wheat cytosol 9.95 19.47
KXG27690 Sorghum cytosol, plastid 23.95 19.43
TraesCS2A01G526200.1 Wheat golgi 22.26 19.38
TraesCS1B01G038500.1 Wheat mitochondrion 25.8 19.37
TraesCS2D01G532400.1 Wheat cytosol 19.9 19.31
TraesCS1A01G067600.1 Wheat mitochondrion 26.48 19.31
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 11.13 19.3
TraesCS1B01G072400.1 Wheat cytosol 22.6 19.28
TraesCS1A01G067000.1 Wheat mitochondrion 23.27 19.27
TraesCS1A01G067400.1 Wheat mitochondrion 26.81 19.27
TraesCS6A01G014600.1 Wheat cytosol 12.82 19.24
TraesCS2B01G559900.1 Wheat cytosol 17.54 19.19
TraesCS1B01G086000.1 Wheat plastid 22.09 19.1
TraesCS1D01G068900.1 Wheat mitochondrion 26.14 19.07
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 22.43 19.03
TraesCS2D01G532300.1 Wheat plastid 24.96 19.02
Os10t0497300-01 Rice mitochondrion 25.46 19.02
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 25.3 18.94
Os10t0495200-01 Rice mitochondrion 24.96 18.93
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 24.96 18.81
OQU82856 Sorghum cytosol 23.78 18.75
TraesCS1D01G068500.1 Wheat mitochondrion 25.63 18.72
TraesCS1B01G039100.1 Wheat mitochondrion 24.62 18.65
TraesCS1A01G073800.1 Wheat mitochondrion 10.46 18.62
Os04t0349600-01 Rice plastid 12.14 18.6
OQU82823 Sorghum cytosol 24.96 18.57
OQU80148 Sorghum mitochondrion 22.77 18.57
TraesCS1B01G085300.1 Wheat mitochondrion 24.79 18.56
OQU82836 Sorghum cytosol 19.06 18.46
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 24.28 18.46
OQU82827 Sorghum cytosol 24.79 18.44
TraesCS2A01G530600.1 Wheat cytosol 23.78 18.43
TraesCS2D01G532600.1 Wheat plastid 24.11 18.43
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 20.91 18.43
TraesCS1A01G054700.2 Wheat mitochondrion 25.13 18.35
Bra016758.1-P Field mustard plastid 35.75 18.29
KXG28799 Sorghum plastid 23.44 18.29
TraesCS2A01G531100.1 Wheat cytosol 17.54 18.28
HORVU6Hr1G002890.6 Barley cytosol, plastid 24.45 18.24
TraesCS1D01G068400.1 Wheat mitochondrion 25.3 18.23
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 25.46 18.19
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 7.76 18.18
Zm00001d007534_P001 Maize plastid 23.78 18.15
HORVU0Hr1G031920.1 Barley plastid 26.31 18.14
HORVU1Hr1G004750.6 Barley plastid 24.28 18.05
TraesCS1B01G071600.1 Wheat mitochondrion 25.8 18.04
TraesCS1D01G068800.1 Wheat plastid 24.79 18.01
TraesCS1A01G054500.1 Wheat mitochondrion 23.61 17.95
TraesCS1B01G039200.1 Wheat mitochondrion 23.61 17.86
HORVU6Hr1G076780.7 Barley mitochondrion 24.79 17.84
TraesCS6A01G311600.1 Wheat mitochondrion 25.13 17.82
KXG19780 Sorghum cytosol 17.71 17.77
TraesCS1D01G069100.1 Wheat mitochondrion 19.22 17.73
TraesCS1D01G056200.1 Wheat mitochondrion 24.62 17.7
TraesCS1A01G057300.1 Wheat cytosol 21.42 17.69
Zm00001d007548_P001 Maize plastid 24.11 17.57
Zm00001d007559_P001 Maize plastid 24.11 17.5
HORVU1Hr1G010970.1 Barley mitochondrion 24.28 17.43
HORVU1Hr1G011160.2 Barley cytosol, plastid 26.31 17.43
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 22.43 17.36
HORVU1Hr1G011150.1 Barley cytosol, plastid 25.8 17.33
Zm00001d007531_P001 Maize plastid 23.78 17.32
Zm00001d007555_P001 Maize plastid 23.78 17.32
TraesCS1D01G076500.1 Wheat mitochondrion 19.39 17.32
CDY31277 Canola plastid 27.99 17.31
HORVU1Hr1G014040.1 Barley mitochondrion 24.28 17.29
TraesCS2B01G560700.1 Wheat plastid 22.43 17.25
TraesCS1A01G073600.1 Wheat mitochondrion 11.3 17.09
TraesCS1B01G072900.2 Wheat mitochondrion 25.13 17.07
HORVU1Hr1G013810.1 Barley plastid 24.11 17.04
Os08t0110200-01 Rice mitochondrion 22.93 17.04
HORVU1Hr1G010890.5 Barley cytosol 25.8 17.04
TraesCS1B01G092500.1 Wheat mitochondrion 22.43 16.99
Os10t0497432-01 Rice mitochondrion 7.59 16.92
HORVU1Hr1G014060.1 Barley plastid 24.96 16.63
HORVU1Hr1G011300.3 Barley plastid 25.63 16.52
TraesCS1A01G055800.1 Wheat mitochondrion 21.42 16.47
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 19.73 16.32
TraesCS1B01G084800.1 Wheat cytosol 12.65 16.16
Zm00001d009735_P001 Maize cytosol 26.48 16.14
TraesCS1A01G073700.1 Wheat cytosol 10.46 16.1
TraesCS1D01G076900.1 Wheat plastid 17.54 15.83
Os04t0351333-00 Rice cytosol 23.44 15.81
TraesCS1D01G068700.1 Wheat cytosol 11.13 15.03
OQU82833 Sorghum cytosol 11.13 14.73
OQU82834 Sorghum cytosol 23.27 14.33
TraesCS1D01G076400.1 Wheat cytosol 8.77 14.33
HORVU1Hr1G011400.44 Barley plastid 14.67 14.12
TraesCS6B01G341800.2 Wheat cytosol 9.27 13.78
TraesCS1D01G033000.1 Wheat cytosol 9.27 13.61
TraesCS1D01G076700.1 Wheat cytosol 7.59 13.47
TraesCS1A01G056000.1 Wheat cytosol 9.11 13.43
TraesCS1D01G058500.1 Wheat plastid 12.82 13.33
TraesCS1B01G038600.1 Wheat cytosol 8.09 13.22
TraesCS6B01G129100.1 Wheat cytosol, plastid 6.41 13.19
CDY34680 Canola cytosol 19.9 12.94
TraesCS1A01G074000.1 Wheat mitochondrion 6.07 12.72
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 4.89 12.72
TraesCS1D01G056600.1 Wheat mitochondrion 4.22 12.38
TraesCS1D01G067600.1 Wheat cytosol 7.59 12.33
TraesCS1A01G066600.1 Wheat mitochondrion 5.4 12.17
TraesCS1B01G038300.1 Wheat plastid 10.96 11.9
TraesCS1A01G067800.1 Wheat cytosol 7.42 11.76
TraesCS1A01G055500.1 Wheat mitochondrion 4.22 11.52
TraesCS2D01G532200.1 Wheat cytosol 5.56 11.26
TraesCS1A01G055600.1 Wheat cytosol 6.07 11.08
TraesCS1D01G057700.1 Wheat cytosol 6.07 11.08
OQU88581 Sorghum cytosol 20.24 11.04
CDY21063 Canola plastid 2.02 2.19
Protein Annotations
EnsemblPlants:PGSC0003DMT400052971EnsemblPlantsGene:PGSC0003DMG400020555Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149PANTHER:PTHR44149:SF3
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PGSC:PGSC0003DMG400020555SUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI0002965FC4UniProt:M1BU74MapMan:35.1::
Description
PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020555]
Coordinates
chr6:+:3093055..3095095
Molecular Weight (calculated)
67022.4 Da
IEP (calculated)
8.265
GRAVY (calculated)
0.024
Length
593 amino acids
Sequence
(BLAST)
001: MRRISLRNGN GNGIPFVSFF ADSAITVRTC SSCHYSNKSI PVKDKIGVNS SNLDDAVTLF HQMVTMKPLP SVVDFSKLFK TMISMKHYSA VLFLFRQMQK
101: LGIPIDGFIL TSVINSYCLM HYSADGAFSV LPIYLKNGIP FNVVTFTTLI RGLFSENKVK DAVELFKKLV REDICEPNDF MYATVMNGLS KRGHTQKTLG
201: LLRLMEQGNT EPDIYIYNIV IDALCKDGNL DAAINILNEM KQKDIPPNMV TYNSFINGLC KLGQWEKVKT LFSEMVNLTM YPDVRIFNIL IDGLCKEGKV
301: EDAEEVMKHM VRKGVEPDII TYNAIMDGYC LRGQVDRARR IFDIMIDKGI EPNIISYNIL INGYCRKKEV NDAMQLFCEI SQKGSKPNVV TYNTILQGLF
401: KVGRIGHAKQ FFAEMLSAGF IPDFYTHGIV LNGYFKYGLV EEALSLFNKL EGKRENADII FYNVVIGGLG NNGKLNEARA IFEKLSLIGL LPNARTYNIM
501: IHGLCLEGLL DEANDMLRKM EENGYMPNIF TYNVLVRGFL RCSKITEMTT FMKEMTGRGF SFDATTTGLL VNVLRESPSV LDMILELHSK IMK
Best Arabidopsis Sequence Match ( AT1G12700.2 )
(BLAST)
001: MFVGYRAKTN NSAEEIMMIK RSITTNMKAL RLIQPHLLKT GSLRTDLLCT ISSFFSSCER DFSSISNGNV CFRERLRSGI VDIKKDDAIA LFQEMIRSRP
101: LPSLVDFSRF FSAIARTKQF NLVLDFCKQL ELNGIAHNIY TLNIMINCFC RCCKTCFAYS VLGKVMKLGY EPDTTTFNTL IKGLFLEGKV SEAVVLVDRM
201: VENGCQPDVV TYNSIVNGIC RSGDTSLALD LLRKMEERNV KADVFTYSTI IDSLCRDGCI DAAISLFKEM ETKGIKSSVV TYNSLVRGLC KAGKWNDGAL
301: LLKDMVSREI VPNVITFNVL LDVFVKEGKL QEANELYKEM ITRGISPNII TYNTLMDGYC MQNRLSEANN MLDLMVRNKC SPDIVTFTSL IKGYCMVKRV
401: DDGMKVFRNI SKRGLVANAV TYSILVQGFC QSGKIKLAEE LFQEMVSHGV LPDVMTYGIL LDGLCDNGKL EKALEIFEDL QKSKMDLGIV MYTTIIEGMC
501: KGGKVEDAWN LFCSLPCKGV KPNVMTYTVM ISGLCKKGSL SEANILLRKM EEDGNAPNDC TYNTLIRAHL RDGDLTASAK LIEEMKSCGF SADASSIKMV
601: IDMLLSGELD KSFLDMLS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.