Factsheet for Bra006187.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
endoplasmic reticulum 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69436	Canola	plastid	85.91	50.2
CDY49646	Canola	mitochondrion	83.85	48.7
Bra027029.1-P	Field mustard	mitochondrion	39.52	47.33
Bra027636.1-P	Field mustard	cytosol	46.74	41.98
AT5G16640.1	Thale cress	mitochondrion	72.16	41.67
Bra036649.1-P	Field mustard	cytosol	46.39	34.53
Bra025516.1-P	Field mustard	cytosol, mitochondrion	52.92	32.29
Bra027726.1-P	Field mustard	mitochondrion	50.52	31.21
PGSC0003DMT400008759	Potato	cytosol	32.3	29.47
Bra027026.1-P	Field mustard	mitochondrion	52.92	29.45
Bra036651.1-P	Field mustard	mitochondrion	53.61	29.16
Bra026884.1-P	Field mustard	cytosol	45.36	28.76
Bra026836.1-P	Field mustard	cytosol, mitochondrion	48.45	28.72
Bra021192.1-P	Field mustard	plastid	49.14	28.37
Solyc06g007810.1.1	Tomato	cytosol	25.09	27.24
Bra026882.1-P	Field mustard	cytosol	47.77	26.03
VIT_14s0030g02260.t01	Wine grape	cytosol	36.77	24.15
Bra016762.1-P	Field mustard	mitochondrion	48.8	23.39
Bra027658.1-P	Field mustard	cytosol, mitochondrion	43.3	23.2
Bra026971.1-P	Field mustard	mitochondrion	49.83	23.05
Bra031731.1-P	Field mustard	mitochondrion	40.21	23.03
Bra028267.1-P	Field mustard	mitochondrion	49.48	23.0
Bra026958.1-P	Field mustard	mitochondrion	50.17	22.92
PGSC0003DMT400052977	Potato	cytosol	30.58	22.88
VIT_12s0028g02320.t01	Wine grape	mitochondrion	37.11	22.64
Solyc06g005220.2.1	Tomato	cytosol	30.93	22.17
Bra026954.1-P	Field mustard	mitochondrion	49.48	22.15
VIT_14s0081g00110.t01	Wine grape	cytosol	36.77	21.79
Bra026401.1-P	Field mustard	plastid	39.86	21.68
Bra026957.1-P	Field mustard	mitochondrion	44.33	21.39
VIT_14s0081g00270.t01	Wine grape	plastid	40.89	20.52
PGSC0003DMT400008757	Potato	cytosol	34.02	19.88
PGSC0003DMT400025087	Potato	endoplasmic reticulum	33.68	19.8
VIT_14s0081g00120.t01	Wine grape	plastid	39.18	19.55
KRH70370	Soybean	cytosol	36.08	19.3
VIT_14s0030g02280.t01	Wine grape	plastid	36.08	18.72
HORVU1Hr1G011250.1	Barley	cytosol	18.9	18.64
KRH09256	Soybean	mitochondrion	35.74	18.6
PGSC0003DMT400025067	Potato	cytosol	30.24	18.49
Solyc06g007280.2.1	Tomato	cytosol	16.15	18.43
KRH38755	Soybean	mitochondrion	37.46	18.35
KRH49698	Soybean	cytosol	35.74	18.25
VIT_14s0081g00280.t01	Wine grape	mitochondrion	39.52	18.0
Os10t0501700-00	Rice	cytosol	27.15	17.4
PGSC0003DMT400056663	Potato	plastid	35.05	17.35
PGSC0003DMT400008760	Potato	mitochondrion	34.71	17.24
PGSC0003DMT400025074	Potato	cytosol	32.65	17.21
PGSC0003DMT400056665	Potato	mitochondrion	34.71	17.15
Solyc06g007300.1.1	Tomato	extracellular	34.71	17.06
KRH42744	Soybean	mitochondrion	35.74	17.02
TraesCS2B01G126900.1	Wheat	cytosol	22.34	17.02
Solyc06g007740.1.1	Tomato	cytosol	34.02	16.78
TraesCS6B01G114300.1	Wheat	cytosol	22.34	16.71
KRH58843	Soybean	nucleus	35.05	16.69
PGSC0003DMT400053556	Potato	mitochondrion	26.12	16.56
PGSC0003DMT400052971	Potato	mitochondrion	33.68	16.53
PGSC0003DMT400053185	Potato	mitochondrion	32.99	16.27
PGSC0003DMT400053182	Potato	cytosol	33.33	16.19
KRH75063	Soybean	mitochondrion, plastid	33.33	16.06
KRH75045	Soybean	mitochondrion	32.3	15.75
PGSC0003DMT400015293	Potato	mitochondrion	32.99	15.74
PGSC0003DMT400015298	Potato	mitochondrion	32.99	15.74
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	27.15	15.46
TraesCS6A01G014600.1	Wheat	cytosol	20.62	15.19
KRH75048	Soybean	mitochondrion	31.62	15.13
Solyc04g080120.1.1	Tomato	extracellular	31.62	15.03
TraesCS6B01G127200.1	Wheat	cytosol	17.53	14.83
TraesCS1D01G058000.1	Wheat	cytosol	20.27	14.53
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.78	14.48
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	18.56	14.29
TraesCS1D01G058400.1	Wheat	cytosol	25.09	14.17
KXG34536	Sorghum	mitochondrion	27.49	13.99
TraesCS6A01G083000.1	Wheat	cytosol	21.65	13.82
TraesCS1B01G072700.1	Wheat	cytosol	24.05	13.73
Os10t0497366-00	Rice	mitochondrion	18.9	13.72
TraesCS7B01G469500.1	Wheat	cytosol	26.12	13.52
TraesCS1D01G076700.1	Wheat	cytosol	15.46	13.47
TraesCS1D01G068700.1	Wheat	cytosol	20.27	13.44
Bra027656.1-P	Field mustard	cytosol	42.96	13.28
OQU82833	Sorghum	cytosol	20.27	13.17
TraesCS1B01G084800.1	Wheat	cytosol	20.96	13.15
TraesCS6D01G017700.1	Wheat	plastid	24.05	13.11
TraesCS6D01G017800.1	Wheat	cytosol	24.05	13.04
Os10t0495100-01	Rice	cytosol, mitochondrion	20.27	12.8
TraesCS6D01G083300.1	Wheat	mitochondrion	19.59	12.78
Bra016758.1-P	Field mustard	plastid	50.86	12.77
HORVU0Hr1G035310.1	Barley	cytosol	25.43	12.71
TraesCS1B01G038200.1	Wheat	mitochondrion	27.49	12.64
TraesCS1B01G038400.1	Wheat	cytosol	26.12	12.5
TraesCS1B01G039700.1	Wheat	cytosol	26.12	12.5
OQU82831	Sorghum	cytosol	26.12	12.4
TraesCS1B01G072400.1	Wheat	cytosol	29.21	12.23
TraesCS1A01G073700.1	Wheat	cytosol	16.15	12.21
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	20.96	12.13
TraesCS1A01G031600.1	Wheat	cytosol	27.49	12.08
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	20.96	12.08
Os08t0107800-01	Rice	mitochondrion	25.77	12.02
HORVU6Hr1G017870.2	Barley	mitochondrion	12.37	12.0
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	19.93	11.98
TraesCS2A01G531100.1	Wheat	cytosol	23.37	11.95
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.12	11.89
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	28.52	11.87
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	19.59	11.85
KXG19780	Sorghum	cytosol	24.05	11.84
TraesCS1D01G069100.1	Wheat	mitochondrion	26.12	11.82
TraesCS1D01G055300.1	Wheat	cytosol	25.09	11.81
TraesCS2B01G560300.1	Wheat	cytosol	23.02	11.78
EER95949	Sorghum	mitochondrion	26.8	11.76
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	26.8	11.75
TraesCS1B01G075300.1	Wheat	cytosol	24.05	11.73
TraesCS1B01G073100.1	Wheat	cytosol	24.4	11.72
OQU88594	Sorghum	cytosol	20.96	11.69
KXG35774	Sorghum	cytosol, mitochondrion	18.9	11.63
TraesCS2B01G559900.1	Wheat	cytosol	21.65	11.62
TraesCS2A01G526200.1	Wheat	golgi	27.15	11.6
HORVU1Hr1G018190.2	Barley	cytosol	11.34	11.58
TraesCS1B01G085400.1	Wheat	cytosol	25.43	11.54
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	26.12	11.53
TraesCS6B01G341800.2	Wheat	cytosol	15.81	11.53
Os10t0495200-01	Rice	mitochondrion	30.93	11.51
TraesCS2D01G532500.1	Wheat	plastid	26.8	11.47
TraesCS1A01G056000.1	Wheat	cytosol	15.81	11.44
OQU82856	Sorghum	cytosol	29.55	11.44
TraesCS1B01G092600.1	Wheat	plastid	20.27	11.41
TraesCS1D01G056700.1	Wheat	cytosol	23.71	11.37
Os08t0248400-01	Rice	mitochondrion	17.18	11.36
TraesCS6D01G083400.1	Wheat	mitochondrion	19.24	11.36
TraesCS1A01G054800.1	Wheat	cytosol	22.68	11.34
TraesCS2A01G531000.1	Wheat	golgi	26.46	11.34
TraesCS6D01G290900.1	Wheat	mitochondrion	28.52	11.32
TraesCS1D01G076500.1	Wheat	mitochondrion	25.77	11.3
TraesCS1B01G086000.1	Wheat	plastid	26.46	11.22
TraesCS6B01G127500.1	Wheat	cytosol	18.9	11.22
TraesCSU01G089700.1	Wheat	mitochondrion	18.56	11.2
EES07882	Sorghum	cytosol	29.9	11.2
Zm00001d007534_P001	Maize	plastid	29.9	11.2
Zm00001d018982_P001	Maize	mitochondrion	13.4	11.14
TraesCS2D01G532100.1	Wheat	mitochondrion	26.46	11.13
TraesCS1A01G031700.1	Wheat	plastid	28.18	11.07
TraesCS6D01G047700.1	Wheat	mitochondrion	26.12	11.0
TraesCS2D01G532400.1	Wheat	cytosol	23.02	10.97
TraesCS1D01G076900.1	Wheat	plastid	24.74	10.96
Os10t0497300-01	Rice	mitochondrion	29.9	10.96
TraesCS1D01G068800.1	Wheat	plastid	30.58	10.91
TraesCS1A01G057300.1	Wheat	cytosol	26.8	10.86
TraesCS6D01G083100.1	Wheat	cytosol	18.21	10.82
KXG27690	Sorghum	cytosol, plastid	27.15	10.81
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	28.87	10.77
TraesCS1B01G072300.1	Wheat	plastid	20.96	10.74
OQU80148	Sorghum	mitochondrion	26.8	10.73
TraesCS1B01G039100.1	Wheat	mitochondrion	28.87	10.73
TraesCS1B01G092500.1	Wheat	mitochondrion	28.87	10.73
TraesCS1A01G067700.1	Wheat	extracellular	12.37	10.68
Os10t0499500-01	Rice	mitochondrion	18.56	10.67
OQU82823	Sorghum	cytosol	29.21	10.66
EES09203	Sorghum	cytosol	29.21	10.65
Os08t0110200-01	Rice	mitochondrion	29.21	10.65
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	26.12	10.63
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	25.43	10.62
TraesCS1A01G067600.1	Wheat	mitochondrion	29.55	10.58
Zm00001d007548_P001	Maize	plastid	29.55	10.57
Zm00001d007555_P001	Maize	plastid	29.55	10.57
HORVU1Hr1G004750.6	Barley	plastid	28.87	10.53
Zm00001d007559_P001	Maize	plastid	29.55	10.53
TraesCS1A01G054500.1	Wheat	mitochondrion	28.18	10.51
TraesCS1B01G039200.1	Wheat	mitochondrion	28.18	10.46
TraesCS1B01G085900.1	Wheat	mitochondrion	29.21	10.44
TraesCS1A01G067400.1	Wheat	mitochondrion	29.55	10.42
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	28.18	10.42
OQU82827	Sorghum	cytosol	28.52	10.41
TraesCS2D01G532300.1	Wheat	plastid	27.84	10.41
TraesCS1D01G033000.1	Wheat	cytosol	14.43	10.4
TraesCS1B01G038500.1	Wheat	mitochondrion	28.18	10.38
TraesCS2B01G560700.1	Wheat	plastid	27.49	10.38
TraesCS1A01G067000.1	Wheat	mitochondrion	25.43	10.34
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	25.43	10.32
Zm00001d007531_P001	Maize	plastid	28.87	10.32
TraesCS2D01G532600.1	Wheat	plastid	27.49	10.31
HORVU1Hr1G010970.1	Barley	mitochondrion	29.21	10.29
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	27.84	10.23
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	25.09	10.22
TraesCS1D01G068500.1	Wheat	mitochondrion	28.52	10.22
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	25.09	10.21
TraesCS1D01G068400.1	Wheat	mitochondrion	28.87	10.21
HORVU1Hr1G014040.1	Barley	mitochondrion	29.21	10.2
TraesCS2A01G530600.1	Wheat	cytosol	26.8	10.2
TraesCS6B01G021600.1	Wheat	mitochondrion	25.09	10.2
TraesCS1D01G056200.1	Wheat	mitochondrion	28.87	10.18
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	23.37	10.1
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	24.74	10.07
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	26.46	10.05
TraesCS6A01G311600.1	Wheat	mitochondrion	28.87	10.05
HORVU6Hr1G014310.1	Barley	mitochondrion	23.71	10.04
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	15.12	10.02
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	28.52	10.0
KXG28799	Sorghum	plastid	26.12	10.0
TraesCS1A01G054700.2	Wheat	mitochondrion	27.84	9.98
TraesCS1B01G038600.1	Wheat	cytosol	12.37	9.92
TraesCS1A01G067800.1	Wheat	cytosol	12.71	9.89
TraesCS1D01G067600.1	Wheat	cytosol	12.37	9.86
HORVU6Hr1G076780.7	Barley	mitochondrion	27.84	9.83
Zm00001d009733_P001	Maize	cytosol	26.46	9.69
HORVU1Hr1G013810.1	Barley	plastid	27.84	9.65
TraesCS1B01G085300.1	Wheat	mitochondrion	26.12	9.6
HORVU0Hr1G031920.1	Barley	plastid	28.18	9.53
TraesCS1D01G068900.1	Wheat	mitochondrion	26.46	9.47
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	14.09	9.47
TraesCS1A01G055800.1	Wheat	mitochondrion	25.09	9.47
TraesCS1B01G071600.1	Wheat	mitochondrion	27.15	9.32
TraesCS1B01G072900.2	Wheat	mitochondrion	27.84	9.28
HORVU1Hr1G011160.2	Barley	cytosol, plastid	28.52	9.27
HORVU1Hr1G010890.5	Barley	cytosol	28.52	9.24
HORVU1Hr1G011300.3	Barley	plastid	29.21	9.24
TraesCS7D01G231400.1	Wheat	cytosol, plastid	12.71	9.18
HORVU1Hr1G011150.1	Barley	cytosol, plastid	27.84	9.17
OQU82836	Sorghum	cytosol	19.24	9.15
TraesCSU01G090200.1	Wheat	cytosol	13.75	9.05
HORVU1Hr1G014060.1	Barley	plastid	27.15	8.88
HORVU6Hr1G002890.6	Barley	cytosol, plastid	23.02	8.43
TraesCS6A01G015000.1	Wheat	mitochondrion	11.68	8.19
Os04t0351333-00	Rice	cytosol	24.74	8.19
TraesCS1D01G058500.1	Wheat	plastid	15.81	8.07
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	13.06	7.92
Zm00001d009735_P001	Maize	cytosol	26.46	7.91
TraesCS6D01G076500.1	Wheat	plastid	12.03	7.73
OQU82834	Sorghum	cytosol	25.09	7.58
TraesCS1B01G038300.1	Wheat	plastid	14.09	7.51
TraesCS1B01G073200.1	Wheat	cytosol	7.56	7.26
TraesCS1A01G055600.1	Wheat	cytosol	7.9	7.08
TraesCS1D01G057700.1	Wheat	cytosol	7.9	7.08
TraesCS1A01G073800.1	Wheat	mitochondrion	7.56	6.61
TraesCS2D01G532200.1	Wheat	cytosol	6.53	6.48
Os08t0107700-01	Rice	cytosol, mitochondrion	8.25	6.42
OQU88581	Sorghum	cytosol	23.37	6.26
TraesCSU01G089800.1	Wheat	mitochondrion	7.22	5.98
Os04t0349600-01	Rice	plastid	7.9	5.94
TraesCS1D01G068600.1	Wheat	plastid	6.87	5.88
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	7.56	5.8
OQU82832	Sorghum	cytosol	4.81	4.9
HORVU1Hr1G011400.44	Barley	plastid	10.31	4.87
TraesCS1D01G057800.1	Wheat	mitochondrion	5.84	4.68
TraesCS1D01G056600.1	Wheat	mitochondrion	3.09	4.46
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	5.15	4.39
TraesCS1A01G066600.1	Wheat	mitochondrion	3.78	4.18
TraesCS1B01G315500.1	Wheat	mitochondrion	4.12	3.74
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	4.12	3.69
TraesCS1A01G055500.1	Wheat	mitochondrion	2.75	3.69
TraesCS1A01G074000.1	Wheat	mitochondrion	3.44	3.53
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	2.75	3.51
Os10t0497432-01	Rice	mitochondrion	2.75	3.01
TraesCS1A01G073600.1	Wheat	mitochondrion	3.44	2.55
TraesCS6B01G129100.1	Wheat	cytosol, plastid	2.06	2.08
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	1.37	1.58
TraesCS1D01G076400.1	Wheat	cytosol	1.72	1.38

Protein Annotations

EnsemblPlants:Bra006187.1	EnsemblPlants:Bra006187.1-P	EnsemblPlantsGene:Bra006187	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR44149
PANTHER:PTHR44149:SF3	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756	UniParc:UPI000253FA4F
UniProt:M4CPP8	MapMan:35.1	:	:	:	:

Description

AT5G16640 (E=3e-113) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA03:+:2414140..2415801

Molecular Weight (calculated)

32580.3 Da

IEP (calculated)

8.522

GRAVY (calculated)

0.126

Length

291 amino acids

Sequence
(BLAST)

001: MSSSAATVAQ TASPLQPSTI SALVRLLRWL LAGSSAFGIQ GTSRRMLNLY DAFVKRGSLL EAEELYMEMV RRSLEPDVVT YSLLIDGLCV YSRLDEAERM
101: FEYMASKRCF PDVVTYSILI NGFCKSRKVD YGMKLFCEMS RRGVIRNVVT YTILIQGYCL AGKVNVAEEI LRRMVGSGVS PNIVTYNVLL HGLCDNGKVE
201: KALVMLEGME KSGMEGDIVT YNIIIRGMCK AGEVAHAWGL YCSLNLKGRV PDIWTYTTMM LGLYKKGLRR EADVLFRKMK EDGILPNECC V

Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)

001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

Arabidopsis Description

RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.