CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG98502
KRG98507
KRH46360
KRH46364

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	KRG98502	AT4G26630.1	25387881
AT1G62670.1	KRG98507	AT4G26630.1	25387881
AT1G62670.1	KRH46360	AT4G26630.1	25387881
AT1G62670.1	KRH46364	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75048	Soybean	mitochondrion	97.32	95.56
KRH75063	Soybean	mitochondrion, plastid	90.62	89.57
KRH70370	Soybean	cytosol	62.48	68.57
KRH49698	Soybean	cytosol	63.32	66.32
KRH09256	Soybean	mitochondrion	50.75	54.2
KRH42744	Soybean	mitochondrion	53.94	52.7
KRH38755	Soybean	mitochondrion	52.43	52.69
KRH58843	Soybean	nucleus	53.77	52.54
VIT_12s0028g02320.t01	Wine grape	mitochondrion	36.52	45.7
VIT_14s0081g00270.t01	Wine grape	plastid	41.04	42.24
VIT_14s0081g00110.t01	Wine grape	cytosol	33.33	40.53
PGSC0003DMT400008757	Potato	cytosol	33.67	40.36
CDY09968	Canola	cytosol	19.77	40.14
VIT_14s0081g00120.t01	Wine grape	plastid	39.03	39.97
CDY06217	Canola	cytosol	19.6	39.93
Solyc06g007810.1.1	Tomato	cytosol	17.92	39.93
Bra027636.1-P	Field mustard	cytosol	21.44	39.51
CDX71969	Canola	cytosol	26.13	39.39
PGSC0003DMT400052977	Potato	cytosol	25.63	39.33
CDX67634	Canola	cytosol	27.81	39.24
PGSC0003DMT400008759	Potato	cytosol	20.94	39.19
CDY51169	Canola	cytosol	27.3	38.53
KRH39072	Soybean	cytosol	31.99	38.51
KRH39004	Soybean	cytosol	31.99	38.43
KRH39054	Soybean	cytosol	31.83	38.23
KRH39057	Soybean	cytosol	31.83	38.23
VIT_14s0030g02280.t01	Wine grape	plastid	35.85	38.15
CDY03257	Canola	cytosol	24.96	38.11
CDY16033	Canola	cytosol	9.55	38.0
Solyc06g005220.2.1	Tomato	cytosol	25.8	37.93
Bra027029.1-P	Field mustard	mitochondrion	15.41	37.86
Bra026882.1-P	Field mustard	cytosol	33.84	37.83
CDY16110	Canola	extracellular	25.96	37.8
Bra036649.1-P	Field mustard	cytosol	24.62	37.6
CDY33797	Canola	mitochondrion	32.16	37.5
KRH39074	Soybean	cytosol	31.16	37.42
CDY39810	Canola	cytosol	24.46	37.34
KRH40513	Soybean	plastid	21.94	37.32
PGSC0003DMT400025087	Potato	endoplasmic reticulum	30.82	37.17
KRH08636	Soybean	cytosol	32.5	37.16
Bra031731.1-P	Field mustard	mitochondrion	31.49	37.01
AT3G22470.1	Thale cress	cytosol, mitochondrion	38.36	37.0
CDY46909	Canola	mitochondrion	18.09	36.99
CDY16002	Canola	cytosol	19.26	36.98
PGSC0003DMT400025074	Potato	cytosol	34.17	36.96
Bra026884.1-P	Field mustard	cytosol	28.31	36.82
VIT_14s0081g00280.t01	Wine grape	mitochondrion	39.36	36.78
CDY26607	Canola	cytosol	28.14	36.76
CDY65983	Canola	mitochondrion	25.96	36.73
CDY16031	Canola	cytosol	19.1	36.66
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	30.99	36.63
KRH39112	Soybean	cytosol	30.49	36.62
CDY34870	Canola	mitochondrion	17.59	36.59
PGSC0003DMT400008760	Potato	mitochondrion	35.85	36.52
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	31.99	36.38
CDY31272	Canola	mitochondrion	34.51	36.27
CDY68929	Canola	mitochondrion	36.85	36.24
CDY26589	Canola	cytosol	4.19	36.23
CDY00489	Canola	mitochondrion	35.51	36.18
PGSC0003DMT400056665	Potato	mitochondrion	35.68	36.16
PGSC0003DMT400025067	Potato	cytosol	28.81	36.13
CDY26593	Canola	cytosol	36.85	36.12
Bra021192.1-P	Field mustard	plastid	30.49	36.11
AT1G12300.1	Thale cress	mitochondrion	38.53	36.11
AT1G62720.1	Thale cress	mitochondrion	29.31	36.08
Bra016762.1-P	Field mustard	mitochondrion	36.68	36.08
Bra026958.1-P	Field mustard	mitochondrion	38.36	35.95
Bra025516.1-P	Field mustard	cytosol, mitochondrion	28.64	35.85
Bra026971.1-P	Field mustard	mitochondrion	37.69	35.77
AT1G62680.2	Thale cress	plastid	32.83	35.77
CDY46394	Canola	mitochondrion	28.81	35.76
AT1G63080.3	Thale cress	mitochondrion	36.68	35.67
Solyc06g007300.1.1	Tomato	extracellular	35.34	35.64
Bra028267.1-P	Field mustard	mitochondrion	37.35	35.62
AT1G63330.2	Thale cress	cytosol	33.33	35.6
CDY34969	Canola	mitochondrion	30.15	35.57
AT5G16640.1	Thale cress	mitochondrion	29.98	35.52
Bra036651.1-P	Field mustard	mitochondrion	31.83	35.51
KRH08628	Soybean	plastid	32.83	35.51
Bra026957.1-P	Field mustard	mitochondrion	35.85	35.49
AT1G12620.1	Thale cress	cytosol, mitochondrion	36.85	35.43
KRH09084	Soybean	plastid	30.32	35.42
CDY48949	Canola	mitochondrion	28.48	35.34
PGSC0003DMT400052971	Potato	mitochondrion	35.01	35.24
KRH41817	Soybean	mitochondrion	32.66	35.14
AT3G16710.1	Thale cress	mitochondrion	29.82	35.11
CDY25492	Canola	mitochondrion	28.81	35.03
AT1G12700.2	Thale cress	cytosol	36.18	34.95
KRH08277	Soybean	plastid	33.17	34.92
Solyc06g007740.1.1	Tomato	cytosol	34.51	34.92
KRH08671	Soybean	cytosol, mitochondrion	32.33	34.9
CDY08386	Canola	cytosol	25.96	34.83
CDY34688	Canola	cytosol	21.11	34.81
CDY49646	Canola	mitochondrion	29.15	34.73
PGSC0003DMT400056663	Potato	plastid	34.17	34.69
AT1G12775.1	Thale cress	cytosol, mitochondrion	37.35	34.63
KRH39066	Soybean	cytosol	32.16	34.59
KRH48615	Soybean	mitochondrion	31.49	34.5
AT1G62910.1	Thale cress	mitochondrion	36.52	34.49
Bra026954.1-P	Field mustard	mitochondrion	37.52	34.46
CDY26565	Canola	mitochondrion	32.83	34.45
CDX69436	Canola	plastid	28.64	34.34
KRH08639	Soybean	mitochondrion, plastid	32.5	34.34
CDY26588	Canola	extracellular	18.59	34.26
KRH39050	Soybean	mitochondrion	30.49	34.21
CDY16026	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	31.32	34.06
AT1G64580.1	Thale cress	mitochondrion	29.82	34.03
KRH08625	Soybean	plastid	32.83	34.03
AT1G63150.1	Thale cress	mitochondrion	35.85	34.02
KRH40400	Soybean	plastid	32.83	33.97
AT1G63130.1	Thale cress	mitochondrion	35.85	33.97
AT5G41170.1	Thale cress	mitochondrion	29.98	33.97
CDY31271	Canola	mitochondrion	27.64	33.95
CDY16032	Canola	mitochondrion	23.12	33.82
KRH09154	Soybean	mitochondrion	31.49	33.81
AT1G63400.1	Thale cress	cytosol, plastid	32.66	33.8
KRH17148	Soybean	mitochondrion	30.82	33.76
PGSC0003DMT400053185	Potato	mitochondrion	33.33	33.73
Solyc06g007280.2.1	Tomato	cytosol	14.41	33.73
Bra027026.1-P	Field mustard	mitochondrion	29.48	33.65
AT1G63070.1	Thale cress	mitochondrion	33.0	33.39
AT1G62930.1	Thale cress	plastid	35.18	33.39
CDY29251	Canola	mitochondrion	28.31	33.33
KRH08607	Soybean	cytosol	31.32	33.33
AT1G06580.1	Thale cress	mitochondrion	27.81	33.2
Bra026836.1-P	Field mustard	cytosol, mitochondrion	27.3	33.2
KRH09121	Soybean	mitochondrion	29.48	32.96
Bra026401.1-P	Field mustard	plastid	29.31	32.71
CDX89301	Canola	plastid	29.31	32.71
AT1G64583.1	Thale cress	mitochondrion	27.97	32.62
CDY46912	Canola	mitochondrion	26.97	32.59
AT1G62670.1	Thale cress	mitochondrion	34.34	32.54
CDY34375	Canola	mitochondrion	28.14	32.5
AT1G62914.1	Thale cress	mitochondrion	28.64	32.39
Bra006187.1-P	Field mustard	plastid	15.75	32.3
PGSC0003DMT400015293	Potato	mitochondrion	33.0	32.3
PGSC0003DMT400015298	Potato	mitochondrion	33.0	32.3
KRH09097	Soybean	plastid	31.49	32.25
KRH31646	Soybean	cytosol	27.97	32.24
CDY35831	Canola	mitochondrion	27.81	32.23
KRH25652	Soybean	cytosol, golgi	29.15	32.22
AT1G62590.1	Thale cress	mitochondrion	34.17	32.18
Bra027658.1-P	Field mustard	cytosol, mitochondrion	29.15	32.04
CDY33753	Canola	mitochondrion	23.79	31.98
Solyc04g080120.1.1	Tomato	extracellular	32.66	31.86
PGSC0003DMT400053182	Potato	cytosol	31.83	31.72
AT4G26800.2	Thale cress	mitochondrion, plastid	27.14	31.52
CDY66358	Canola	mitochondrion	20.44	31.28
KRH09095	Soybean	plastid	30.65	31.28
Bra027726.1-P	Field mustard	mitochondrion	24.62	31.21
KRH09082	Soybean	cytosol	21.27	31.13
PGSC0003DMT400053556	Potato	mitochondrion	23.28	30.28
CDY28348	Canola	mitochondrion, plastid	30.15	30.1
CDY47835	Canola	mitochondrion	21.61	29.52
CDY25522	Canola	mitochondrion, plastid	21.94	29.31
CDY16003	Canola	cytosol, plastid	19.1	29.16
CDY25519	Canola	mitochondrion, plastid	31.16	29.11
VIT_14s0030g02260.t01	Wine grape	cytosol	20.94	28.22
KRH08599	Soybean	cytosol, plastid	30.65	27.35
AT1G64100.2	Thale cress	cytosol	35.68	26.43
KRH09085	Soybean	mitochondrion	31.16	26.42
CDX68680	Canola	mitochondrion	20.27	26.19
CDY66357	Canola	cytosol	16.42	25.86
CDY15970	Canola	cytosol	3.85	24.47
CDX81633	Canola	extracellular, golgi, plasma membrane	35.18	23.1
CDY34370	Canola	cytosol	31.32	22.78
KRH39064	Soybean	cytosol	33.17	20.43
Bra027656.1-P	Field mustard	cytosol	31.49	19.98
Bra016758.1-P	Field mustard	plastid	38.19	19.67
CDY31277	Canola	plastid	27.81	17.31
KRH12873	Soybean	cytosol	18.93	16.24
CDY34680	Canola	cytosol	22.11	14.47
CDY21063	Canola	plastid	1.51	1.64

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100812458	MapMan:35.1	EMBL:ACUP02000111	EnsemblPlantsGene:GLYMA_01G058700	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	UniProt:K7K229	ProteinID:KRH75044.1	EnsemblPlants:KRH75045	ProteinID:KRH75045
ProteinID:KRH75045.1	PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015
PANTHER:PTHR24015:SF1594	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00023BB475	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:7774549..7777396

Molecular Weight (calculated)

67190.7 Da

IEP (calculated)

8.392

GRAVY (calculated)

0.118

Length

597 amino acids

Sequence
(BLAST)

001: MIMRRSSSIH GFPLLRYFAL SSNPTHFLLH PSHSSSTFST YASINTSRAQ FLDSLRNVKS VDVALDFYHK MVTMKPFPCV KDFNLLFGIV AKMKHYTTAI
101: SLIKHMSYIG VKPNVPTHNI VINCLCRLNH TVFGFSVLGL MFKIGVEPSI VTFTTIVNGL CVEGNVAQAI RFVDHLKDMG YESDRYTRGA IINGLCKVGH
201: SSAALSYLKK MEEQNCNLDV TAYNAVVDGL CKDGMVFEAW DLFSQMTGKG IQPDLFTYNC LIHGLCNFDR WKEAAPLLAN MMRKGIMPDV QTFNVIGGRF
301: LKTGMISRAK SIFSFMGHMG IEHDVVTYSS IIGVHCMLNQ MKDAMEVFDL MIRKGCLPNI VTYTSLIHGW CEIKNMNKAM YFLGEMVNNG LDPNIVTWNT
401: LIGGFCKAGK PVAAKELFFV MHKHGQLPDL QTCAIILDGL FKCHFHSEAM SLFRELEKMN SDLDIIIYSI ILNGMCSSGK LNDALELFSY LSSKGVKIDV
501: VTYNIMINGL CKEGLLDDAE DLLMKMEENG CPPDECTYNV FVQGLLRRYE ISKSTKYLMF MKGKGFRANA TTTKLLINYF SANKENRAFQ VFLQKFV

Best Arabidopsis Sequence Match ( AT1G12700.2 )
(BLAST)

001: MFVGYRAKTN NSAEEIMMIK RSITTNMKAL RLIQPHLLKT GSLRTDLLCT ISSFFSSCER DFSSISNGNV CFRERLRSGI VDIKKDDAIA LFQEMIRSRP
101: LPSLVDFSRF FSAIARTKQF NLVLDFCKQL ELNGIAHNIY TLNIMINCFC RCCKTCFAYS VLGKVMKLGY EPDTTTFNTL IKGLFLEGKV SEAVVLVDRM
201: VENGCQPDVV TYNSIVNGIC RSGDTSLALD LLRKMEERNV KADVFTYSTI IDSLCRDGCI DAAISLFKEM ETKGIKSSVV TYNSLVRGLC KAGKWNDGAL
301: LLKDMVSREI VPNVITFNVL LDVFVKEGKL QEANELYKEM ITRGISPNII TYNTLMDGYC MQNRLSEANN MLDLMVRNKC SPDIVTFTSL IKGYCMVKRV
401: DDGMKVFRNI SKRGLVANAV TYSILVQGFC QSGKIKLAEE LFQEMVSHGV LPDVMTYGIL LDGLCDNGKL EKALEIFEDL QKSKMDLGIV MYTTIIEGMC
501: KGGKVEDAWN LFCSLPCKGV KPNVMTYTVM ISGLCKKGSL SEANILLRKM EEDGNAPNDC TYNTLIRAHL RDGDLTASAK LIEEMKSCGF SADASSIKMV
601: IDMLLSGELD KSFLDMLS

Arabidopsis Description

ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.