Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15970 | Canola | cytosol | 66.67 | 48.94 |
| CDY16033 | Canola | cytosol | 66.67 | 30.67 |
| CDX68679 | Canola | cytosol | 30.43 | 18.26 |
| CDX71969 | Canola | cytosol | 79.71 | 13.89 |
| CDY51169 | Canola | cytosol | 72.46 | 11.82 |
| CDY33753 | Canola | mitochondrion | 71.01 | 11.04 |
| CDY16110 | Canola | extracellular | 65.22 | 10.98 |
| Bra026884.1-P | Field mustard | cytosol | 71.01 | 10.68 |
| CDY26607 | Canola | cytosol | 69.57 | 10.5 |
| CDY34688 | Canola | cytosol | 55.07 | 10.5 |
| Bra026836.1-P | Field mustard | cytosol, mitochondrion | 72.46 | 10.18 |
| CDY35831 | Canola | mitochondrion | 75.36 | 10.1 |
| CDY33797 | Canola | mitochondrion | 72.46 | 9.77 |
| Solyc06g007810.1.1 | Tomato | cytosol | 36.23 | 9.33 |
| CDY00489 | Canola | mitochondrion | 72.46 | 8.53 |
| CDY26565 | Canola | mitochondrion | 68.12 | 8.26 |
| PGSC0003DMT400008759 | Potato | cytosol | 37.68 | 8.15 |
| CDY34375 | Canola | mitochondrion | 60.87 | 8.12 |
| CDY31272 | Canola | mitochondrion | 65.22 | 7.92 |
| AT1G12620.1 | Thale cress | cytosol, mitochondrion | 68.12 | 7.57 |
| CDY68929 | Canola | mitochondrion | 65.22 | 7.41 |
| AT1G12775.1 | Thale cress | cytosol, mitochondrion | 68.12 | 7.3 |
| AT3G22470.1 | Thale cress | cytosol, mitochondrion | 63.77 | 7.11 |
| AT1G12300.1 | Thale cress | mitochondrion | 65.22 | 7.06 |
| CDY31271 | Canola | mitochondrion | 47.83 | 6.79 |
| PGSC0003DMT400052977 | Potato | cytosol | 37.68 | 6.68 |
| VIT_14s0030g02260.t01 | Wine grape | cytosol | 36.23 | 5.64 |
| CDY26593 | Canola | cytosol | 47.83 | 5.42 |
| VIT_14s0081g00110.t01 | Wine grape | cytosol | 37.68 | 5.3 |
| CDX81633 | Canola | extracellular, golgi, plasma membrane | 69.57 | 5.28 |
| PGSC0003DMT400025067 | Potato | cytosol | 36.23 | 5.25 |
| KRH70370 | Soybean | cytosol | 39.13 | 4.96 |
| PGSC0003DMT400025087 | Potato | endoplasmic reticulum | 34.78 | 4.85 |
| KRH75063 | Soybean | mitochondrion, plastid | 40.58 | 4.64 |
| PGSC0003DMT400008757 | Potato | cytosol | 33.33 | 4.62 |
| KRH49698 | Soybean | cytosol | 37.68 | 4.56 |
| CDY31277 | Canola | plastid | 62.32 | 4.48 |
| CDY25522 | Canola | mitochondrion, plastid | 28.99 | 4.47 |
| PGSC0003DMT400008760 | Potato | mitochondrion | 37.68 | 4.44 |
| PGSC0003DMT400056663 | Potato | plastid | 37.68 | 4.42 |
| PGSC0003DMT400052971 | Potato | mitochondrion | 37.68 | 4.38 |
| VIT_14s0081g00120.t01 | Wine grape | plastid | 36.23 | 4.29 |
| VIT_14s0081g00280.t01 | Wine grape | mitochondrion | 39.13 | 4.23 |
| KRH75045 | Soybean | mitochondrion | 36.23 | 4.19 |
| VIT_14s0081g00270.t01 | Wine grape | plastid | 34.78 | 4.14 |
| KRH09256 | Soybean | mitochondrion | 33.33 | 4.11 |
| KRH75048 | Soybean | mitochondrion | 36.23 | 4.11 |
| PGSC0003DMT400053185 | Potato | mitochondrion | 34.78 | 4.07 |
| Solyc06g007300.1.1 | Tomato | extracellular | 34.78 | 4.05 |
| KRH38755 | Soybean | mitochondrion | 34.78 | 4.04 |
| PGSC0003DMT400053182 | Potato | cytosol | 34.78 | 4.01 |
| CDY66357 | Canola | cytosol | 21.74 | 3.96 |
| KRH58843 | Soybean | nucleus | 34.78 | 3.93 |
| PGSC0003DMT400025074 | Potato | cytosol | 30.43 | 3.8 |
| KRH42744 | Soybean | mitochondrion | 33.33 | 3.76 |
| Solyc06g007740.1.1 | Tomato | cytosol | 31.88 | 3.73 |
| PGSC0003DMT400056665 | Potato | mitochondrion | 30.43 | 3.57 |
| CDY08386 | Canola | cytosol | 20.29 | 3.15 |
| CDY47835 | Canola | mitochondrion | 18.84 | 2.97 |
| Solyc06g005220.2.1 | Tomato | cytosol | 17.39 | 2.96 |
| CDY46912 | Canola | mitochondrion | 20.29 | 2.83 |
| PGSC0003DMT400015298 | Potato | mitochondrion | 24.64 | 2.79 |
| PGSC0003DMT400015293 | Potato | mitochondrion | 24.64 | 2.79 |
| Solyc04g080120.1.1 | Tomato | extracellular | 24.64 | 2.78 |
| CDY16003 | Canola | cytosol, plastid | 13.04 | 2.3 |
| CDY25519 | Canola | mitochondrion, plastid | 20.29 | 2.19 |
| CDY34680 | Canola | cytosol | 27.54 | 2.08 |
| CDY34370 | Canola | cytosol | 24.64 | 2.07 |
| CDX89301 | Canola | plastid | 14.49 | 1.87 |
| CDY28348 | Canola | mitochondrion, plastid | 15.94 | 1.84 |
| CDY06217 | Canola | cytosol | 7.25 | 1.71 |
| CDY09968 | Canola | cytosol | 7.25 | 1.7 |
| CDY16002 | Canola | cytosol | 5.8 | 1.29 |
| VIT_12s0028g02320.t01 | Wine grape | mitochondrion | 8.7 | 1.26 |
| CDX69436 | Canola | plastid | 8.7 | 1.2 |
| CDY49646 | Canola | mitochondrion | 8.7 | 1.2 |
| CDY65983 | Canola | mitochondrion | 7.25 | 1.18 |
| CDY29251 | Canola | mitochondrion | 8.7 | 1.18 |
| CDX67634 | Canola | cytosol | 7.25 | 1.18 |
| VIT_14s0030g02280.t01 | Wine grape | plastid | 8.7 | 1.07 |
| CDY34870 | Canola | mitochondrion | 4.35 | 1.05 |
| CDY48949 | Canola | mitochondrion | 7.25 | 1.04 |
| CDY46394 | Canola | mitochondrion | 7.25 | 1.04 |
| CDY46909 | Canola | mitochondrion | 4.35 | 1.03 |
| CDY03257 | Canola | cytosol | 5.8 | 1.02 |
| CDY39810 | Canola | cytosol | 5.8 | 1.02 |
| CDY25492 | Canola | mitochondrion | 7.25 | 1.02 |
| CDY34969 | Canola | mitochondrion | 7.25 | 0.99 |
| CDY16031 | Canola | cytosol | 4.35 | 0.96 |
| CDY66358 | Canola | mitochondrion | 4.35 | 0.77 |
| CDY16032 | Canola | mitochondrion | 4.35 | 0.74 |
| CDY16026 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 2.9 | 0.36 |
| CDX68680 | Canola | mitochondrion | 1.45 | 0.22 |
| CDY21063 | Canola | plastid | 0.0 | 0.0 |
| CDY26588 | Canola | extracellular | 0.0 | 0.0 |
| Solyc06g007280.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400053556 | Potato | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY26589 | EnsemblPlantsGene:GSBRNA2T00035458001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PFAM:PF13041 | PFscan:PS51375 |
| ProteinID:CDY26589 | ProteinID:CDY26589.1 | TIGRFAMs:TIGR00756 | UniParc:UPI0004EDE7AA | UniProt:A0A078GN02 | MapMan:35.1 |
Description
BnaA09g46880DBnaA09g46880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GN02]
Coordinates
chrLK032192:-:249837..250981
Molecular Weight (calculated)
7763.1 Da
IEP (calculated)
4.141
GRAVY (calculated)
-0.422
Length
69 amino acids
Sequence
(BLAST)
(BLAST)
1: MEEDGNAPND CTYNTLVRAY LRDCDLAKSA ELIEEMKSYG FSADASTVKM VMDRLSSGEL DKRFLDMLS
001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.