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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG98502
KRG98507
KRH46360
KRH46364

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 KRG98502 AT4G26630.1 25387881
AT1G62670.1 KRG98507 AT4G26630.1 25387881
AT1G62670.1 KRH46360 AT4G26630.1 25387881
AT1G62670.1 KRH46364 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH49698 Soybean cytosol 87.68 83.68
KRH75063 Soybean mitochondrion, plastid 70.77 63.74
KRH75045 Soybean mitochondrion 68.57 62.48
KRH75048 Soybean mitochondrion 69.67 62.34
KRH58843 Soybean nucleus 57.72 51.39
KRH42744 Soybean mitochondrion 56.8 50.57
KRH38755 Soybean mitochondrion 54.78 50.17
KRH09256 Soybean mitochondrion 50.92 49.55
VIT_12s0028g02320.t01 Wine grape mitochondrion 39.89 45.49
VIT_14s0081g00120.t01 Wine grape plastid 45.77 42.71
VIT_14s0081g00270.t01 Wine grape plastid 44.85 42.07
VIT_14s0081g00110.t01 Wine grape cytosol 37.68 41.75
CDY09968 Canola cytosol 22.43 41.5
Bra027636.1-P Field mustard cytosol 24.63 41.36
CDY06217 Canola cytosol 22.24 41.3
KRH39054 Soybean cytosol 37.68 41.25
KRH39004 Soybean cytosol 37.5 41.05
KRH39057 Soybean cytosol 37.5 41.05
KRH39074 Soybean cytosol 37.5 41.05
KRH39072 Soybean cytosol 37.32 40.93
PGSC0003DMT400008759 Potato cytosol 23.71 40.44
CDY51169 Canola cytosol 31.07 39.95
Solyc06g005220.2.1 Tomato cytosol 29.78 39.9
PGSC0003DMT400052977 Potato cytosol 28.49 39.85
CDY03257 Canola cytosol 28.31 39.39
PGSC0003DMT400008757 Potato cytosol 35.85 39.16
CDY26589 Canola cytosol 4.96 39.13
CDY39810 Canola cytosol 28.12 39.13
KRH39112 Soybean cytosol 35.66 39.03
CDX67634 Canola cytosol 30.33 39.01
Bra036649.1-P Field mustard cytosol 27.94 38.87
CDX71969 Canola cytosol 28.12 38.64
CDY16110 Canola extracellular 28.86 38.29
Bra026882.1-P Field mustard cytosol 37.32 38.02
VIT_14s0030g02280.t01 Wine grape plastid 39.15 37.97
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 35.11 37.82
PGSC0003DMT400025074 Potato cytosol 38.05 37.5
KRH40513 Soybean plastid 24.08 37.32
AT1G62720.1 Thale cress mitochondrion 33.27 37.32
KRH08671 Soybean cytosol, mitochondrion 37.87 37.25
KRH08636 Soybean cytosol 35.66 37.16
Bra027029.1-P Field mustard mitochondrion 16.54 37.04
CDY46909 Canola mitochondrion 19.85 36.99
CDY16002 Canola cytosol 21.14 36.98
Solyc06g007810.1.1 Tomato cytosol 18.2 36.94
CDY33797 Canola mitochondrion 34.74 36.91
PGSC0003DMT400025087 Potato endoplasmic reticulum 33.46 36.77
VIT_14s0081g00280.t01 Wine grape mitochondrion 43.01 36.62
Bra026884.1-P Field mustard cytosol 30.88 36.6
KRH08628 Soybean plastid 37.13 36.59
KRH39066 Soybean cytosol 37.32 36.58
KRH41817 Soybean mitochondrion 37.32 36.58
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 35.29 36.57
KRH08607 Soybean cytosol 37.68 36.54
KRH09084 Soybean plastid 34.19 36.4
Bra006187.1-P Field mustard plastid 19.3 36.08
CDY16031 Canola cytosol 20.59 36.01
PGSC0003DMT400008760 Potato mitochondrion 38.79 36.01
CDY26607 Canola cytosol 30.15 35.89
Bra025516.1-P Field mustard cytosol, mitochondrion 31.43 35.85
Bra031731.1-P Field mustard mitochondrion 33.46 35.83
KRH08277 Soybean plastid 37.32 35.8
CDY00489 Canola mitochondrion 38.42 35.67
AT1G63330.2 Thale cress cytosol 36.58 35.6
PGSC0003DMT400052971 Potato mitochondrion 38.79 35.58
CDY46394 Canola mitochondrion 31.43 35.55
PGSC0003DMT400056665 Potato mitochondrion 38.24 35.31
CDY65983 Canola mitochondrion 27.39 35.31
Solyc06g007300.1.1 Tomato extracellular 38.42 35.3
Bra028267.1-P Field mustard mitochondrion 40.62 35.3
Solyc06g007280.2.1 Tomato cytosol 16.54 35.29
KRH09154 Soybean mitochondrion 36.03 35.25
KRH08625 Soybean plastid 37.32 35.24
PGSC0003DMT400056663 Potato plastid 38.05 35.2
CDY48949 Canola mitochondrion 31.07 35.14
PGSC0003DMT400025067 Potato cytosol 30.7 35.08
CDY26588 Canola extracellular 20.77 34.88
KRH08639 Soybean mitochondrion, plastid 36.21 34.87
KRH25652 Soybean cytosol, golgi 34.56 34.81
KRH17148 Soybean mitochondrion 34.74 34.68
CDY16033 Canola cytosol 9.56 34.67
Bra026957.1-P Field mustard mitochondrion 38.42 34.66
CDY25492 Canola mitochondrion 31.25 34.62
CDY08386 Canola cytosol 28.31 34.61
AT1G12300.1 Thale cress mitochondrion 40.44 34.54
AT3G16710.1 Thale cress mitochondrion 32.17 34.52
Bra026971.1-P Field mustard mitochondrion 39.89 34.5
KRH48615 Soybean mitochondrion 34.56 34.5
CDY34870 Canola mitochondrion 18.2 34.49
AT1G12620.1 Thale cress cytosol, mitochondrion 39.34 34.46
AT3G22470.1 Thale cress cytosol, mitochondrion 39.15 34.41
KRH39050 Soybean mitochondrion 33.64 34.4
CDY34969 Canola mitochondrion 31.99 34.39
Bra026958.1-P Field mustard mitochondrion 40.26 34.38
AT5G16640.1 Thale cress mitochondrion 31.8 34.33
KRH40400 Soybean plastid 36.4 34.32
Bra016762.1-P Field mustard mitochondrion 38.24 34.27
CDY68929 Canola mitochondrion 38.24 34.27
CDX69436 Canola plastid 31.25 34.14
Bra021192.1-P Field mustard plastid 31.62 34.13
KRH09121 Soybean mitochondrion 33.46 34.08
CDY26593 Canola cytosol 38.05 33.99
AT1G12700.2 Thale cress cytosol 38.42 33.82
AT5G41170.1 Thale cress mitochondrion 32.72 33.78
AT1G62680.2 Thale cress plastid 34.01 33.76
CDY49646 Canola mitochondrion 31.07 33.73
AT1G63080.3 Thale cress mitochondrion 38.05 33.71
Bra027026.1-P Field mustard mitochondrion 32.35 33.65
PGSC0003DMT400053185 Potato mitochondrion 36.03 33.22
Solyc06g007740.1.1 Tomato cytosol 36.03 33.22
CDY31272 Canola mitochondrion 34.56 33.1
Bra036651.1-P Field mustard mitochondrion 32.54 33.08
CDY46912 Canola mitochondrion 29.96 33.0
CDY26565 Canola mitochondrion 34.38 32.86
AT1G64583.1 Thale cress mitochondrion 30.88 32.81
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 33.09 32.79
AT1G63400.1 Thale cress cytosol, plastid 34.74 32.76
AT1G62910.1 Thale cress mitochondrion 38.05 32.75
AT1G06580.1 Thale cress mitochondrion 29.96 32.6
AT1G62930.1 Thale cress plastid 37.68 32.59
AT1G12775.1 Thale cress cytosol, mitochondrion 38.42 32.45
Bra026836.1-P Field mustard cytosol, mitochondrion 29.23 32.38
CDY35831 Canola mitochondrion 30.51 32.23
AT1G62590.1 Thale cress mitochondrion 37.5 32.18
CDY29251 Canola mitochondrion 29.96 32.15
AT1G63150.1 Thale cress mitochondrion 36.95 31.96
AT1G64580.1 Thale cress mitochondrion 30.7 31.93
CDY31271 Canola mitochondrion 28.49 31.89
CDY16032 Canola mitochondrion 23.9 31.86
Bra026954.1-P Field mustard mitochondrion 38.05 31.85
CDX89301 Canola plastid 31.25 31.78
AT1G62670.1 Thale cress mitochondrion 36.76 31.75
AT1G63130.1 Thale cress mitochondrion 36.76 31.75
CDY34375 Canola mitochondrion 30.15 31.72
Bra027658.1-P Field mustard cytosol, mitochondrion 31.62 31.68
KRH31646 Soybean cytosol 30.15 31.66
KRH09082 Soybean cytosol 23.71 31.62
Bra026401.1-P Field mustard plastid 31.07 31.59
CDY34688 Canola cytosol 20.96 31.49
PGSC0003DMT400015293 Potato mitochondrion 35.29 31.48
PGSC0003DMT400015298 Potato mitochondrion 35.29 31.48
Solyc04g080120.1.1 Tomato extracellular 35.11 31.21
KRH09095 Soybean plastid 33.46 31.11
PGSC0003DMT400053556 Potato mitochondrion 26.1 30.94
VIT_14s0030g02260.t01 Wine grape cytosol 25.18 30.93
KRH09097 Soybean plastid 33.09 30.87
CDY33753 Canola mitochondrion 25.18 30.86
AT1G63070.1 Thale cress mitochondrion 33.46 30.85
AT4G26800.2 Thale cress mitochondrion, plastid 29.04 30.74
PGSC0003DMT400053182 Potato cytosol 33.64 30.55
CDY66358 Canola mitochondrion 21.88 30.51
AT1G62914.1 Thale cress mitochondrion 29.41 30.3
Bra027726.1-P Field mustard mitochondrion 25.37 29.3
CDY25519 Canola mitochondrion, plastid 34.38 29.26
CDY16003 Canola cytosol, plastid 20.96 29.16
CDY47835 Canola mitochondrion 22.98 28.6
CDY28348 Canola mitochondrion, plastid 31.43 28.6
KRH08599 Soybean cytosol, plastid 35.11 28.55
CDY25522 Canola mitochondrion, plastid 22.79 27.74
CDY15970 Canola cytosol 4.6 26.6
KRH09085 Soybean mitochondrion 34.01 26.28
CDY66357 Canola cytosol 17.65 25.33
CDX68680 Canola mitochondrion 21.51 25.32
AT1G64100.2 Thale cress cytosol 36.4 24.57
CDY34370 Canola cytosol 34.56 22.9
CDX81633 Canola extracellular, golgi, plasma membrane 37.87 22.66
KRH39064 Soybean cytosol 38.24 21.47
Bra027656.1-P Field mustard cytosol 34.74 20.09
Bra016758.1-P Field mustard plastid 38.79 18.21
KRH12873 Soybean cytosol 23.16 18.1
CDY31277 Canola plastid 29.23 16.58
CDY34680 Canola cytosol 23.16 13.82
CDY21063 Canola plastid 0.55 0.55
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1UniProt:A0A0R0KZG3EMBL:ACUP02000767EnsemblPlantsGene:GLYMA_02G086700GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0004518GO:GO:0004519GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006139GO:GO:0008150
GO:GO:0008152GO:GO:0009451GO:GO:0009987GO:GO:0016787GO:GO:0043231GO:GO:0090305
InterPro:IPR002885InterPro:IPR011990EnsemblPlants:KRH70370ProteinID:KRH70370ProteinID:KRH70370.1PFAM:PF01535
PFAM:PF12854PFAM:PF13041PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF1594InterPro:Pentatricopeptide_repeat
TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI0006ED566B:::
Description
hypothetical protein
Coordinates
chr2:+:7547108..7548816
Molecular Weight (calculated)
60262.1 Da
IEP (calculated)
7.157
GRAVY (calculated)
0.213
Length
544 amino acids
Sequence
(BLAST)
001: MRSLKSEESA LSFFHKMVAM NPLPPDKDFA TLFGVIVKMK HYATAISLIK HTYSLGVKPD VHTLTIVINC LCHLKHTVFG FSVLGAMFKI GVEPTVVTFA
101: TLINGLCAEG NVGAAARFAD SLEDMGYESN SYTHGTIING LCKVGDTAGA ISYLEKIEGR NRGFDLLIAY STIMDSLCKD GMLCLALNFF SGMTCKGIQP
201: DLVAYNSLIH GLCSFGRWNE ATTLLGNMMR KGIMPNVQTF NVLVDNFCKE GKISRAKTIM CFMVHVGVEP DVVTYNSVIS GHCLLSQMND AVKVFELMIH
301: KGLLPNVVTY SSLIHGWCKT RNINKAIFVL DEMVNNGLNL DVVTWSTLIG GFCKAGRPEA AIELFCTMHE HHQLPNLQTC AIILDGLFKC QFHSEAISLF
401: RKMEKMNLEL NIVTYNIVLD GMCSFGKFND ARELFSCLPS KGIQIDVVAY TTMIKGLCKE GLLDDAEDLL MKMEENGCPP NEFTYNVLVR GLLQRYDISR
501: STKYLMLMKG KGLSADATTT ELLISYFSAN KENSALQVFL QKFV
Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)
001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.