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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68929 Canola mitochondrion 98.85 98.85
Bra026884.1-P Field mustard cytosol 53.54 70.81
Bra028267.1-P Field mustard mitochondrion 71.99 69.81
Bra026958.1-P Field mustard mitochondrion 71.99 68.6
Bra026971.1-P Field mustard mitochondrion 70.68 68.2
Bra026882.1-P Field mustard cytosol 59.97 68.16
AT1G12620.1 Thale cress cytosol, mitochondrion 69.52 67.95
Bra026836.1-P Field mustard cytosol, mitochondrion 54.37 67.21
Bra031731.1-P Field mustard mitochondrion 56.01 66.93
AT1G12300.1 Thale cress mitochondrion 69.03 65.78
AT3G22470.1 Thale cress cytosol, mitochondrion 66.72 65.43
Bra026954.1-P Field mustard mitochondrion 68.53 64.0
AT1G12775.1 Thale cress cytosol, mitochondrion 66.89 63.04
Bra026957.1-P Field mustard mitochondrion 59.47 59.87
Bra027029.1-P Field mustard mitochondrion 21.42 53.5
Bra027636.1-P Field mustard cytosol 28.01 52.47
Bra027658.1-P Field mustard cytosol, mitochondrion 46.13 51.57
Bra036649.1-P Field mustard cytosol 32.45 50.38
Bra006187.1-P Field mustard plastid 23.39 48.8
Bra027026.1-P Field mustard mitochondrion 41.19 47.8
Bra036651.1-P Field mustard mitochondrion 40.86 46.36
VIT_12s0028g02320.t01 Wine grape mitochondrion 35.58 45.28
Bra021192.1-P Field mustard plastid 37.56 45.24
Bra027726.1-P Field mustard mitochondrion 34.1 43.95
Bra025516.1-P Field mustard cytosol, mitochondrion 34.27 43.61
VIT_14s0081g00270.t01 Wine grape plastid 39.7 41.55
Solyc06g007280.2.1 Tomato cytosol 16.8 40.0
VIT_14s0081g00120.t01 Wine grape plastid 38.39 39.97
Bra016758.1-P Field mustard plastid 75.12 39.34
VIT_14s0081g00110.t01 Wine grape cytosol 31.8 39.31
KRH70370 Soybean cytosol 34.27 38.24
Bra026401.1-P Field mustard plastid 33.61 38.13
KRH49698 Soybean cytosol 35.26 37.54
Solyc06g005220.2.1 Tomato cytosol 24.88 37.19
KRH75063 Soybean mitochondrion, plastid 36.74 36.92
VIT_14s0030g02280.t01 Wine grape plastid 33.94 36.72
KRH75045 Soybean mitochondrion 36.08 36.68
PGSC0003DMT400008757 Potato cytosol 29.98 36.55
PGSC0003DMT400008759 Potato cytosol 19.11 36.36
KRH42744 Soybean mitochondrion 36.57 36.33
PGSC0003DMT400025074 Potato cytosol 32.95 36.23
KRH75048 Soybean mitochondrion 36.24 36.18
KRH58843 Soybean nucleus 36.41 36.17
PGSC0003DMT400052977 Potato cytosol 23.06 35.99
Solyc06g007300.1.1 Tomato extracellular 34.93 35.81
VIT_14s0081g00280.t01 Wine grape mitochondrion 37.4 35.52
Solyc06g007810.1.1 Tomato cytosol 15.65 35.45
PGSC0003DMT400008760 Potato mitochondrion 34.1 35.32
KRH38755 Soybean mitochondrion 34.43 35.19
PGSC0003DMT400025087 Potato endoplasmic reticulum 28.5 34.95
PGSC0003DMT400056663 Potato plastid 33.44 34.52
PGSC0003DMT400052971 Potato mitochondrion 33.28 34.06
KRH09256 Soybean mitochondrion 31.3 33.99
PGSC0003DMT400056665 Potato mitochondrion 32.95 33.96
Solyc06g007740.1.1 Tomato cytosol 32.78 33.73
PGSC0003DMT400025067 Potato cytosol 26.36 33.61
PGSC0003DMT400053185 Potato mitochondrion 32.13 33.05
PGSC0003DMT400053556 Potato mitochondrion 24.71 32.68
PGSC0003DMT400053182 Potato cytosol 30.64 31.05
VIT_14s0030g02260.t01 Wine grape cytosol 22.24 30.47
PGSC0003DMT400015293 Potato mitochondrion 30.31 30.16
PGSC0003DMT400015298 Potato mitochondrion 30.31 30.16
Solyc04g080120.1.1 Tomato extracellular 30.31 30.07
Zm00001d018982_P001 Maize mitochondrion 16.8 29.14
OQU82832 Sorghum cytosol 13.67 29.02
Bra027656.1-P Field mustard cytosol 44.65 28.8
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 14.0 28.62
TraesCS6B01G127200.1 Wheat cytosol 15.65 27.62
TraesCS6D01G083300.1 Wheat mitochondrion 20.26 27.58
Os10t0495100-01 Rice cytosol, mitochondrion 20.92 27.55
HORVU6Hr1G017870.2 Barley mitochondrion 13.51 27.33
TraesCS6A01G015000.1 Wheat mitochondrion 18.62 27.23
HORVU1Hr1G011250.1 Barley cytosol 13.18 27.12
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 14.5 27.08
HORVU1Hr1G018190.2 Barley cytosol 12.69 27.02
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 16.8 26.98
TraesCSU01G089700.1 Wheat mitochondrion 21.42 26.97
TraesCS1D01G058000.1 Wheat cytosol 17.96 26.85
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 21.09 26.45
Os08t0248400-01 Rice mitochondrion 19.11 26.36
TraesCS6D01G083100.1 Wheat cytosol 21.25 26.33
TraesCS2B01G126900.1 Wheat cytosol 16.47 26.18
Os10t0497366-00 Rice mitochondrion 17.13 25.94
TraesCSU01G089800.1 Wheat mitochondrion 14.99 25.93
TraesCSU01G090200.1 Wheat cytosol 18.62 25.57
TraesCS1A01G067700.1 Wheat extracellular 14.17 25.52
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 10.54 25.3
Os10t0501700-00 Rice cytosol 18.78 25.11
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 20.76 24.95
TraesCS6D01G083400.1 Wheat mitochondrion 20.26 24.95
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 19.77 24.95
OQU88594 Sorghum cytosol 21.42 24.9
TraesCS6B01G127500.1 Wheat cytosol 20.1 24.9
Os08t0107700-01 Rice cytosol, mitochondrion 15.32 24.87
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 20.43 24.65
EER95949 Sorghum mitochondrion 26.69 24.43
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 20.43 24.27
KXG34536 Sorghum mitochondrion 22.73 24.13
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 14.99 24.01
Os10t0499500-01 Rice mitochondrion 19.77 23.72
Os10t0497432-01 Rice mitochondrion 10.38 23.68
TraesCS1B01G073200.1 Wheat cytosol 11.7 23.43
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 16.64 23.33
TraesCS7D01G231400.1 Wheat cytosol, plastid 15.49 23.33
Os08t0107800-01 Rice mitochondrion 23.89 23.24
TraesCS1B01G072700.1 Wheat cytosol 19.28 22.94
EES09203 Sorghum cytosol 29.98 22.81
TraesCS6D01G076500.1 Wheat plastid 16.97 22.74
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 17.96 22.71
TraesCS1D01G068600.1 Wheat plastid 12.69 22.65
OQU82856 Sorghum cytosol 28.01 22.61
KXG27690 Sorghum cytosol, plastid 27.02 22.43
OQU80148 Sorghum mitochondrion 26.85 22.42
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 26.36 22.38
TraesCS1D01G057800.1 Wheat mitochondrion 13.34 22.31
Os10t0495200-01 Rice mitochondrion 28.5 22.12
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 25.86 21.96
TraesCS1D01G058400.1 Wheat cytosol 18.62 21.94
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 12.36 21.93
TraesCS6B01G021600.1 Wheat mitochondrion 25.86 21.93
TraesCS1A01G073800.1 Wheat mitochondrion 12.03 21.92
TraesCS7B01G469500.1 Wheat cytosol 20.26 21.89
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 15.82 21.87
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 25.7 21.85
TraesCS1B01G038200.1 Wheat mitochondrion 22.57 21.64
EES07882 Sorghum cytosol 27.68 21.62
OQU82823 Sorghum cytosol 28.34 21.58
TraesCS1B01G072300.1 Wheat plastid 20.1 21.48
OQU82827 Sorghum cytosol 28.17 21.46
TraesCS6D01G290900.1 Wheat mitochondrion 25.86 21.42
TraesCS6D01G047700.1 Wheat mitochondrion 24.38 21.42
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 24.71 20.98
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 22.9 20.93
KXG19780 Sorghum cytosol 20.26 20.81
TraesCS1D01G055300.1 Wheat cytosol 21.09 20.71
TraesCS1B01G086000.1 Wheat plastid 23.39 20.7
TraesCS1B01G092600.1 Wheat plastid 17.63 20.7
TraesCS6D01G017800.1 Wheat cytosol 18.29 20.67
OQU82836 Sorghum cytosol 20.76 20.59
TraesCS1B01G072400.1 Wheat cytosol 23.56 20.58
TraesCS1A01G031700.1 Wheat plastid 25.04 20.51
TraesCS1A01G031600.1 Wheat cytosol 22.24 20.39
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 21.42 20.34
Os10t0497300-01 Rice mitochondrion 26.52 20.28
TraesCS1A01G055500.1 Wheat mitochondrion 7.25 20.28
TraesCS1B01G075300.1 Wheat cytosol 19.93 20.27
TraesCS1B01G315500.1 Wheat mitochondrion 10.71 20.25
HORVU6Hr1G014310.1 Barley mitochondrion 22.9 20.23
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 23.23 20.23
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 25.86 20.13
HORVU0Hr1G035310.1 Barley cytosol 19.28 20.1
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 26.19 20.08
TraesCS1A01G054700.2 Wheat mitochondrion 26.85 20.07
TraesCS1D01G068500.1 Wheat mitochondrion 26.85 20.07
TraesCS6D01G017700.1 Wheat plastid 17.63 20.04
TraesCS1A01G054500.1 Wheat mitochondrion 25.7 20.0
Zm00001d009733_P001 Maize cytosol 26.19 20.0
TraesCS1D01G069100.1 Wheat mitochondrion 21.09 19.91
OQU82831 Sorghum cytosol 20.1 19.9
TraesCS1B01G085400.1 Wheat cytosol 20.92 19.81
HORVU6Hr1G076780.7 Barley mitochondrion 26.85 19.78
TraesCS1D01G056200.1 Wheat mitochondrion 26.85 19.76
TraesCS1D01G068800.1 Wheat plastid 26.52 19.73
TraesCS1B01G085900.1 Wheat mitochondrion 26.36 19.66
HORVU1Hr1G010970.1 Barley mitochondrion 26.69 19.61
TraesCS1D01G056700.1 Wheat cytosol 19.6 19.6
HORVU1Hr1G014040.1 Barley mitochondrion 26.85 19.57
KXG35774 Sorghum cytosol, mitochondrion 15.16 19.45
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 25.21 19.44
TraesCS1A01G067600.1 Wheat mitochondrion 26.03 19.43
TraesCS1D01G068900.1 Wheat mitochondrion 26.03 19.43
Os04t0349600-01 Rice plastid 12.36 19.38
KXG28799 Sorghum plastid 24.22 19.34
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 21.42 19.32
TraesCS1A01G067400.1 Wheat mitochondrion 26.03 19.15
TraesCS1A01G067000.1 Wheat mitochondrion 22.57 19.13
TraesCS2A01G526200.1 Wheat golgi 21.42 19.09
TraesCS1B01G039700.1 Wheat cytosol 19.11 19.08
TraesCS6A01G311600.1 Wheat mitochondrion 26.19 19.02
TraesCS2A01G531000.1 Wheat golgi 21.25 19.0
TraesCS1B01G071600.1 Wheat mitochondrion 26.52 18.99
TraesCS1A01G057300.1 Wheat cytosol 22.41 18.94
TraesCS1B01G072900.2 Wheat mitochondrion 27.18 18.9
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 21.75 18.88
HORVU0Hr1G031920.1 Barley plastid 26.69 18.84
TraesCS2D01G532500.1 Wheat plastid 21.09 18.82
TraesCS1B01G085300.1 Wheat mitochondrion 24.55 18.81
TraesCS1D01G056600.1 Wheat mitochondrion 6.26 18.81
TraesCS1B01G038400.1 Wheat cytosol 18.78 18.75
TraesCS6B01G129100.1 Wheat cytosol, plastid 8.9 18.75
TraesCS1D01G068400.1 Wheat mitochondrion 25.37 18.71
TraesCS2B01G560700.1 Wheat plastid 23.72 18.68
Zm00001d007548_P001 Maize plastid 25.04 18.67
Zm00001d007555_P001 Maize plastid 25.04 18.67
Zm00001d007559_P001 Maize plastid 25.04 18.6
TraesCS2A01G530600.1 Wheat cytosol 23.39 18.56
HORVU1Hr1G011160.2 Barley cytosol, plastid 27.35 18.55
TraesCS2D01G533000.1 Wheat cytosol, extracellular 20.1 18.51
TraesCS1B01G073100.1 Wheat cytosol 18.45 18.48
HORVU1Hr1G013810.1 Barley plastid 25.54 18.47
TraesCS2B01G559900.1 Wheat cytosol 16.47 18.45
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 25.21 18.43
Zm00001d007531_P001 Maize plastid 24.71 18.43
Os08t0110200-01 Rice mitochondrion 24.22 18.42
TraesCS6A01G083000.1 Wheat cytosol 13.84 18.42
TraesCS1B01G092500.1 Wheat mitochondrion 23.72 18.39
TraesCS1A01G054800.1 Wheat cytosol 17.63 18.38
TraesCS1B01G038500.1 Wheat mitochondrion 23.89 18.35
TraesCS2B01G560300.1 Wheat cytosol 17.13 18.28
HORVU6Hr1G002890.6 Barley cytosol, plastid 23.89 18.24
HORVU1Hr1G011150.1 Barley cytosol, plastid 26.52 18.23
TraesCS2D01G532400.1 Wheat cytosol 18.29 18.17
HORVU1Hr1G010890.5 Barley cytosol 26.85 18.15
TraesCS2A01G531100.1 Wheat cytosol 16.97 18.1
HORVU1Hr1G004750.6 Barley plastid 23.72 18.05
TraesCS1A01G055800.1 Wheat mitochondrion 22.9 18.03
Zm00001d007534_P001 Maize plastid 22.9 17.89
TraesCS1B01G039100.1 Wheat mitochondrion 23.06 17.88
TraesCS2D01G532600.1 Wheat plastid 22.73 17.78
TraesCS2D01G532100.1 Wheat mitochondrion 20.26 17.77
TraesCS1D01G076500.1 Wheat mitochondrion 19.44 17.77
HORVU1Hr1G011300.3 Barley plastid 26.85 17.72
HORVU1Hr1G014060.1 Barley plastid 25.86 17.64
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 22.24 17.62
TraesCS1A01G073600.1 Wheat mitochondrion 11.37 17.6
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 6.59 17.54
TraesCS2D01G532300.1 Wheat plastid 22.41 17.48
TraesCS1B01G039200.1 Wheat mitochondrion 22.57 17.47
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 20.59 17.43
TraesCS1A01G074000.1 Wheat mitochondrion 8.07 17.31
TraesCS6B01G114300.1 Wheat cytosol 11.04 17.22
TraesCS6A01G014600.1 Wheat cytosol 11.04 16.96
OQU82834 Sorghum cytosol 26.85 16.93
TraesCS1A01G066600.1 Wheat mitochondrion 7.25 16.73
TraesCS1D01G076900.1 Wheat plastid 17.79 16.44
Zm00001d009735_P001 Maize cytosol 26.19 16.34
HORVU1Hr1G011400.44 Barley plastid 16.47 16.23
TraesCS1B01G084800.1 Wheat cytosol 12.19 15.95
TraesCS1D01G068700.1 Wheat cytosol 11.53 15.95
TraesCS1D01G058500.1 Wheat plastid 14.83 15.79
TraesCS1D01G076400.1 Wheat cytosol 9.39 15.7
TraesCS1A01G073700.1 Wheat cytosol 9.72 15.32
OQU82833 Sorghum cytosol 10.71 14.51
TraesCS1B01G038300.1 Wheat plastid 12.69 14.1
TraesCS1B01G038600.1 Wheat cytosol 8.4 14.05
TraesCS6B01G341800.2 Wheat cytosol 9.23 14.04
TraesCS1A01G056000.1 Wheat cytosol 9.23 13.93
TraesCS1A01G067800.1 Wheat cytosol 8.57 13.9
Os04t0351333-00 Rice cytosol 19.93 13.77
TraesCS1D01G067600.1 Wheat cytosol 8.24 13.7
TraesCS1D01G076700.1 Wheat cytosol 7.41 13.47
TraesCS1D01G033000.1 Wheat cytosol 8.57 12.87
TraesCS1D01G057700.1 Wheat cytosol 5.93 11.08
OQU88581 Sorghum cytosol 19.44 10.86
TraesCS1A01G055600.1 Wheat cytosol 5.6 10.46
TraesCS2D01G532200.1 Wheat cytosol 4.45 9.22
Protein Annotations
EnsemblPlants:Bra016762.1EnsemblPlants:Bra016762.1-PEnsemblPlantsGene:Bra016762Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015
PANTHER:PTHR24015:SF905PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375SEG:seg
SUPFAM:SSF81901TIGRFAMs:TIGR00756UniParc:UPI000254603EUniProt:M4DJT4MapMan:35.1:
Description
AT1G12620 (E=2e-231) | pentatricopeptide (PPR) repeat-containing protein
Coordinates
chrA08:+:19849868..19851691
Molecular Weight (calculated)
67926.1 Da
IEP (calculated)
7.321
GRAVY (calculated)
-0.040
Length
607 amino acids
Sequence
(BLAST)
001: MKRFFQTRLL LQTGTLFLSE RASSTLSKGK KVSYKERLRS GVVDIKKDDA VELFQSMIVS RPLPTIIHFS RLFSSLAKTR QYELVLSLSK QMELHGVAHN
101: NYTLNIMINC FSRRRKLGFA FSAMAKMLKL GYEPDTVTFS TLVNGLCLEG RVSEAVALVD RMVGPNLVTL NTLVNGLCLN GKVYEAVALV DRMVENGCQP
201: DQFTYGPILN RICKSGNTSL ALDLLRKMED RKVKPEAVTY NMIIDSLCKD GSLEDALNLF NEMERKGIKA NVITYNTLIS NFCNAGRWDE AAQLLRDMIT
301: RGITPNVITF SALIDIFVKE GKHVEAKELY NEMIARGIDP DTVTYNSLIY GLCMEKRLDE ANQMMDVMVS KGCSPDSVTY NIIINGYCKA KRVEDGLKLF
401: RKMSLREVVS YNTLVQGFCL SRKIEVAEEL FQEMVSRGVD PDTVTYNILV DGLCENGKLE KALEIFEDLH KSEVELDIGI FNIIIHGMCN GSMIDKAWEL
501: FSSLAHKGVK ADVKTYTIMI GGLCKKGSLS EADMLFRKME EDGIAPNECT YNTLIRAHLG GSGVATSVEL IEEMKRCGFS ADASTMKMVI DMLSDGRLNK
601: NFLGMLS
Best Arabidopsis Sequence Match ( AT1G12620.1 )
(BLAST)
001: MRGLIQTRLL ETGTLRTALF LSCYGRVFSS VSDGKGKVSY RERLRSGIVD IKEDDAVDLF QEMTRSRPRP RLIDFSRLFS VVARTKQYDL VLDLCKQMEL
101: KGIAHNLYTL SIMINCCCRC RKLSLAFSAM GKIIKLGYEP DTVTFSTLIN GLCLEGRVSE ALELVDRMVE MGHKPTLITL NALVNGLCLN GKVSDAVLLI
201: DRMVETGFQP NEVTYGPVLK VMCKSGQTAL AMELLRKMEE RKIKLDAVKY SIIIDGLCKD GSLDNAFNLF NEMEIKGFKA DIIIYTTLIR GFCYAGRWDD
301: GAKLLRDMIK RKITPDVVAF SALIDCFVKE GKLREAEELH KEMIQRGISP DTVTYTSLID GFCKENQLDK ANHMLDLMVS KGCGPNIRTF NILINGYCKA
401: NLIDDGLELF RKMSLRGVVA DTVTYNTLIQ GFCELGKLEV AKELFQEMVS RRVRPDIVSY KILLDGLCDN GEPEKALEIF EKIEKSKMEL DIGIYNIIIH
501: GMCNASKVDD AWDLFCSLPL KGVKPDVKTY NIMIGGLCKK GSLSEADLLF RKMEEDGHSP NGCTYNILIR AHLGEGDATK SAKLIEEIKR CGFSVDASTV
601: KMVVDMLSDG RLKKSFLDML S
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12620 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASZ8]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.