Factsheet for HORVU1Hr1G011400.44

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G073200.1	Wheat	cytosol	40.75	82.84
HORVU1Hr1G010970.1	Barley	mitochondrion	66.23	49.39
HORVU0Hr1G031920.1	Barley	plastid	66.72	47.79
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	63.8	47.35
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	36.69	47.08
HORVU1Hr1G014040.1	Barley	mitochondrion	63.15	46.7
HORVU1Hr1G010890.5	Barley	cytosol	67.86	46.55
HORVU1Hr1G011160.2	Barley	cytosol, plastid	67.37	46.37
HORVU1Hr1G011150.1	Barley	cytosol, plastid	65.42	45.64
HORVU6Hr1G076780.7	Barley	mitochondrion	60.88	45.51
HORVU1Hr1G013810.1	Barley	plastid	61.53	45.17
HORVU1Hr1G011300.3	Barley	plastid	67.05	44.89
HORVU1Hr1G014060.1	Barley	plastid	61.85	42.81
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.16	42.57
KXG28799	Sorghum	plastid	50.65	41.05
HORVU0Hr1G035310.1	Barley	cytosol	38.15	40.38
HORVU1Hr1G004750.6	Barley	plastid	51.62	39.85
Zm00001d007531_P001	Maize	plastid	52.44	39.68
Zm00001d007548_P001	Maize	plastid	51.79	39.19
Zm00001d007555_P001	Maize	plastid	51.62	39.07
Zm00001d007559_P001	Maize	plastid	51.62	38.92
Zm00001d007534_P001	Maize	plastid	48.7	38.61
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	42.21	37.2
HORVU6Hr1G017870.2	Barley	mitochondrion	15.91	32.67
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	40.58	32.64
Os04t0349600-01	Rice	plastid	19.16	30.49
KXG35774	Sorghum	cytosol, mitochondrion	22.56	29.39
Os04t0351333-00	Rice	cytosol	40.91	28.67
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.64	28.28
HORVU6Hr1G002890.6	Barley	cytosol, plastid	35.23	27.3
HORVU6Hr1G014310.1	Barley	mitochondrion	27.92	25.04
CDX68679	Canola	cytosol	4.55	24.35
HORVU1Hr1G018190.2	Barley	cytosol	9.09	19.65
KRH09084	Soybean	plastid	14.94	18.0
KRH39112	Soybean	cytosol	14.29	17.71
AT1G63330.2	Thale cress	cytosol	15.91	17.53
AT1G63130.1	Thale cress	mitochondrion	17.86	17.46
AT1G63070.1	Thale cress	mitochondrion	16.56	17.29
AT1G62670.1	Thale cress	mitochondrion	17.53	17.14
KRH09154	Soybean	mitochondrion	15.26	16.91
KRH39054	Soybean	cytosol	13.47	16.7
KRH39057	Soybean	cytosol	13.47	16.7
AT1G62930.1	Thale cress	plastid	17.05	16.69
AT1G63150.1	Thale cress	mitochondrion	17.05	16.69
VIT_14s0081g00120.t01	Wine grape	plastid	15.75	16.64
KRH17148	Soybean	mitochondrion	14.61	16.51
KRH48615	Soybean	mitochondrion	14.61	16.51
Bra016762.1-P	Field mustard	mitochondrion	16.23	16.47
KRH08671	Soybean	cytosol, mitochondrion	14.77	16.46
AT1G62590.1	Thale cress	mitochondrion	16.88	16.4
KRH08628	Soybean	plastid	14.61	16.3
PGSC0003DMT400025074	Potato	cytosol	14.61	16.3
VIT_14s0081g00110.t01	Wine grape	cytosol	12.99	16.29
KRH08636	Soybean	cytosol	13.8	16.28
Bra027658.1-P	Field mustard	cytosol, mitochondrion	14.29	16.21
AT3G22470.1	Thale cress	cytosol, mitochondrion	16.23	16.16
AT1G62910.1	Thale cress	mitochondrion	16.56	16.14
KRH08639	Soybean	mitochondrion, plastid	14.77	16.11
KRH39004	Soybean	cytosol	12.99	16.1
KRH39074	Soybean	cytosol	12.99	16.1
AT1G12300.1	Thale cress	mitochondrion	16.56	16.01
KRH08625	Soybean	plastid	14.94	15.97
KRH40400	Soybean	plastid	14.94	15.94
Bra026958.1-P	Field mustard	mitochondrion	16.4	15.86
Bra028267.1-P	Field mustard	mitochondrion	16.07	15.81
AT1G12620.1	Thale cress	cytosol, mitochondrion	15.91	15.78
AT1G63400.1	Thale cress	cytosol, plastid	14.77	15.77
Solyc06g007740.1.1	Tomato	cytosol	15.1	15.76
Bra026971.1-P	Field mustard	mitochondrion	16.07	15.74
VIT_14s0081g00270.t01	Wine grape	plastid	14.77	15.69
KRH39066	Soybean	cytosol	14.12	15.68
KRH31646	Soybean	cytosol	13.15	15.64
PGSC0003DMT400053185	Potato	mitochondrion	14.94	15.59
Bra031731.1-P	Field mustard	mitochondrion	12.82	15.55
Bra026954.1-P	Field mustard	mitochondrion	16.4	15.54
AT1G12775.1	Thale cress	cytosol, mitochondrion	16.23	15.53
KRH39072	Soybean	cytosol	12.5	15.52
KRH08277	Soybean	plastid	14.29	15.52
KRH08607	Soybean	cytosol	14.12	15.51
PGSC0003DMT400056663	Potato	plastid	14.77	15.48
AT1G63080.3	Thale cress	mitochondrion	15.42	15.47
PGSC0003DMT400008757	Potato	cytosol	12.5	15.46
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	12.66	15.45
PGSC0003DMT400053182	Potato	cytosol	14.94	15.36
AT1G12700.2	Thale cress	cytosol	15.26	15.21
Solyc04g080120.1.1	Tomato	extracellular	15.1	15.2
PGSC0003DMT400025087	Potato	endoplasmic reticulum	12.18	15.15
PGSC0003DMT400056665	Potato	mitochondrion	14.45	15.11
VIT_12s0028g02320.t01	Wine grape	mitochondrion	11.69	15.09
Bra021192.1-P	Field mustard	plastid	12.34	15.08
KRH39050	Soybean	mitochondrion	12.99	15.04
Solyc06g007300.1.1	Tomato	extracellular	14.45	15.03
VIT_14s0081g00280.t01	Wine grape	mitochondrion	15.58	15.02
Bra026882.1-P	Field mustard	cytosol	12.99	14.98
KRH09121	Soybean	mitochondrion	12.99	14.98
PGSC0003DMT400015293	Potato	mitochondrion	14.77	14.92
PGSC0003DMT400015298	Potato	mitochondrion	14.77	14.92
PGSC0003DMT400025067	Potato	cytosol	11.53	14.92
PGSC0003DMT400008760	Potato	mitochondrion	14.12	14.85
Bra026884.1-P	Field mustard	cytosol	11.04	14.81
PGSC0003DMT400052971	Potato	mitochondrion	14.12	14.67
Bra036651.1-P	Field mustard	mitochondrion	12.66	14.58
KRH09095	Soybean	plastid	13.8	14.53
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	12.34	14.48
KRH09097	Soybean	plastid	13.64	14.41
AT1G62914.1	Thale cress	mitochondrion	12.34	14.39
Bra026401.1-P	Field mustard	plastid	12.5	14.39
Solyc06g005220.2.1	Tomato	cytosol	9.42	14.29
Bra027026.1-P	Field mustard	mitochondrion	12.01	14.15
Solyc06g007280.2.1	Tomato	cytosol	5.84	14.12
Bra026957.1-P	Field mustard	mitochondrion	13.64	13.93
AT1G64100.2	Thale cress	cytosol	18.18	13.9
KRH41817	Soybean	mitochondrion	12.5	13.87
KRH25652	Soybean	cytosol, golgi	12.01	13.7
AT5G16640.1	Thale cress	mitochondrion	11.2	13.69
PGSC0003DMT400052977	Potato	cytosol	8.6	13.62
AT1G64583.1	Thale cress	mitochondrion	11.2	13.48
Solyc06g007810.1.1	Tomato	cytosol	5.84	13.43
VIT_14s0030g02280.t01	Wine grape	plastid	12.18	13.37
AT1G62680.2	Thale cress	plastid	11.85	13.32
Bra026836.1-P	Field mustard	cytosol, mitochondrion	10.55	13.24
AT4G26800.2	Thale cress	mitochondrion, plastid	10.88	13.04
AT1G64580.1	Thale cress	mitochondrion	11.04	13.0
HORVU1Hr1G011250.1	Barley	cytosol	6.17	12.88
AT3G16710.1	Thale cress	mitochondrion	10.55	12.82
KRH40513	Soybean	plastid	7.31	12.82
Bra036649.1-P	Field mustard	cytosol	8.12	12.79
AT1G62720.1	Thale cress	mitochondrion	10.06	12.78
KRH09085	Soybean	mitochondrion	14.45	12.64
AT1G06580.1	Thale cress	mitochondrion	10.23	12.6
KRH08599	Soybean	cytosol, plastid	13.47	12.41
AT5G41170.1	Thale cress	mitochondrion	10.55	12.33
Bra025516.1-P	Field mustard	cytosol, mitochondrion	9.42	12.16
PGSC0003DMT400008759	Potato	cytosol	6.01	11.6
PGSC0003DMT400053556	Potato	mitochondrion	8.6	11.55
Bra027636.1-P	Field mustard	cytosol	6.01	11.42
Bra027656.1-P	Field mustard	cytosol	17.37	11.37
Bra027726.1-P	Field mustard	mitochondrion	8.6	11.25
KRH09082	Soybean	cytosol	7.31	11.03
Bra006187.1-P	Field mustard	plastid	4.87	10.31
KRH12873	Soybean	cytosol	11.36	10.06
KRH39064	Soybean	cytosol	14.77	9.39
VIT_14s0030g02260.t01	Wine grape	cytosol	6.66	9.26
Bra016758.1-P	Field mustard	plastid	15.75	8.37
Bra027029.1-P	Field mustard	mitochondrion	1.62	4.12

Protein Annotations

EnsemblPlants:HORVU1Hr1G011400.44	EnsemblPlantsGene:HORVU1Hr1G011400	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF874
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
UniParc:UPI000B489003	UniProt:A0A287EMH7	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:27453926..27458336

Molecular Weight (calculated)

67766.7 Da

IEP (calculated)

9.483

GRAVY (calculated)

-0.094

Length

616 amino acids

Sequence
(BLAST)

001: RRSFTSPISP LRLRHYSTTP MPMSRLLPRG SSSSTTLIPR LRLLRRRSSS TSTSPPSRSR YLRDAFAAAT GRVREGTLSP EDAHQLFDEL LRQATPVPER
101: SLNGFLYALA RATSSAACIR DGPALAVALF NRVCREEAGP HVAAPTVHTY GILMDCCCRV HRPDLGLSLF GRFLRTGLKT NEIVATTFLK CLCCAKRTDE
201: AVKVLLHRMP ELGCVPNVIS YSIVLKSSCE NGMSQQALDL LQMMAKQGGC LPDVVAYNII IRGFFKEGEI DKVRHLFHEM MRQGVAPSVV TCNTIIDALC
301: KAGEMDKLEL VFQQMARNGA QPNKVTCKGI KFSSPIDGYC SVGKMDKTFK VLDAMVSVGI EPDASTYSAL LEGYFKNGRI DDGLALFREM SCKGVKPKTV
401: TYGIMLDGLY GAGRTAAAKN MFHQMIKSGI TVTASIYTII LRGLRKNNCA GEATTMFQGL GAMNVKFHIT TPNTMINDMY KVQRREEAKC LFAAVSASGL
501: VPDAYTYNVR INNLLEEGSV EEVDNMFSLM EKSGCAPSSH LVNDIIRRLL EKGEIAKAGN YLSKVDGKII SLEDSTTSLL LSLFSRKGKH RESIKLLPAN
601: YHFLGGFSRI AHETNS

Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)

001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.