Factsheet for HORVU1Hr1G014030.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G068400.1	Wheat	mitochondrion	90.84	91.62
TraesCS1B01G085900.1	Wheat	mitochondrion	86.51	88.21
TraesCS1A01G067400.1	Wheat	mitochondrion	86.99	87.52
HORVU1Hr1G014040.1	Barley	mitochondrion	81.45	81.15
HORVU6Hr1G076780.7	Barley	mitochondrion	71.33	71.84
HORVU1Hr1G013810.1	Barley	plastid	71.81	71.04
HORVU0Hr1G035310.1	Barley	cytosol	49.64	70.79
HORVU1Hr1G011250.1	Barley	cytosol	25.06	70.51
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.1	70.27
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.06	70.03
HORVU1Hr1G014060.1	Barley	plastid	74.58	69.55
HORVU1Hr1G010970.1	Barley	mitochondrion	69.04	69.37
HORVU0Hr1G031920.1	Barley	plastid	70.48	68.02
HORVU1Hr1G011160.2	Barley	cytosol, plastid	70.84	65.7
HORVU1Hr1G010890.5	Barley	cytosol	70.24	64.92
HORVU1Hr1G011150.1	Barley	cytosol, plastid	68.67	64.55
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	36.99	63.96
HORVU1Hr1G011400.44	Barley	plastid	47.35	63.8
HORVU1Hr1G011300.3	Barley	plastid	70.12	63.26
HORVU1Hr1G004750.6	Barley	plastid	58.19	60.53
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	50.6	60.09
KXG28799	Sorghum	plastid	52.29	57.11
Zm00001d007534_P001	Maize	plastid	52.53	56.11
Zm00001d007531_P001	Maize	plastid	54.94	56.02
Zm00001d007559_P001	Maize	plastid	54.7	55.57
Zm00001d007548_P001	Maize	plastid	54.46	55.53
Zm00001d007555_P001	Maize	plastid	54.46	55.53
HORVU6Hr1G017870.2	Barley	mitochondrion	19.16	53.0
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	47.47	51.44
KXG35774	Sorghum	cytosol, mitochondrion	28.67	50.32
HORVU1Hr1G018190.2	Barley	cytosol	16.39	47.72
Os04t0349600-01	Rice	plastid	21.2	45.48
Os04t0351333-00	Rice	cytosol	46.02	43.46
HORVU6Hr1G014310.1	Barley	mitochondrion	34.82	42.07
HORVU6Hr1G002890.6	Barley	cytosol, plastid	38.92	40.63
Solyc06g007280.2.1	Tomato	cytosol	10.48	34.12
VIT_14s0081g00110.t01	Wine grape	cytosol	19.28	32.59
KRH39057	Soybean	cytosol	19.04	31.79
VIT_12s0028g02320.t01	Wine grape	mitochondrion	18.19	31.66
KRH39112	Soybean	cytosol	18.8	31.39
KRH39054	Soybean	cytosol	18.55	30.99
KRH39004	Soybean	cytosol	18.43	30.78
KRH39074	Soybean	cytosol	18.31	30.58
KRH39072	Soybean	cytosol	18.19	30.44
Solyc06g005220.2.1	Tomato	cytosol	14.58	29.8
KRH40513	Soybean	plastid	12.53	29.63
VIT_14s0081g00120.t01	Wine grape	plastid	20.72	29.5
VIT_14s0081g00270.t01	Wine grape	plastid	20.6	29.48
Bra026882.1-P	Field mustard	cytosol	18.92	29.4
PGSC0003DMT400052977	Potato	cytosol	13.73	29.31
AT1G63330.2	Thale cress	cytosol	19.64	29.16
PGSC0003DMT400008759	Potato	cytosol	11.2	29.15
KRH08636	Soybean	cytosol	18.31	29.12
Solyc06g007810.1.1	Tomato	cytosol	9.4	29.1
KRH09084	Soybean	plastid	17.83	28.96
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	17.59	28.91
KRH48615	Soybean	mitochondrion	18.92	28.81
KRH09154	Soybean	mitochondrion	19.16	28.6
Bra006187.1-P	Field mustard	plastid	10.0	28.52
Bra027636.1-P	Field mustard	cytosol	11.08	28.4
AT5G16640.1	Thale cress	mitochondrion	17.23	28.37
KRH17148	Soybean	mitochondrion	18.55	28.26
PGSC0003DMT400025067	Potato	cytosol	16.14	28.15
KRH08639	Soybean	mitochondrion, plastid	19.16	28.14
KRH08671	Soybean	cytosol, mitochondrion	18.67	28.03
KRH08607	Soybean	cytosol	18.92	27.99
KRH39066	Soybean	cytosol	18.67	27.93
KRH08628	Soybean	plastid	18.55	27.9
PGSC0003DMT400025087	Potato	endoplasmic reticulum	16.63	27.88
PGSC0003DMT400053185	Potato	mitochondrion	19.76	27.8
Bra026884.1-P	Field mustard	cytosol	15.3	27.67
PGSC0003DMT400025074	Potato	cytosol	18.31	27.54
PGSC0003DMT400008757	Potato	cytosol	16.51	27.51
Solyc06g007740.1.1	Tomato	cytosol	19.52	27.46
VIT_14s0030g02280.t01	Wine grape	plastid	18.55	27.45
VIT_14s0081g00280.t01	Wine grape	mitochondrion	21.08	27.39
KRH08277	Soybean	plastid	18.67	27.34
AT1G63130.1	Thale cress	mitochondrion	20.72	27.3
KRH39050	Soybean	mitochondrion	17.47	27.26
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	17.23	27.24
KRH08625	Soybean	plastid	18.8	27.08
Bra021192.1-P	Field mustard	plastid	16.39	26.98
AT3G22470.1	Thale cress	cytosol, mitochondrion	20.12	26.98
AT1G62930.1	Thale cress	plastid	20.36	26.87
AT1G62670.1	Thale cress	mitochondrion	20.36	26.83
KRH09121	Soybean	mitochondrion	17.23	26.78
AT1G63080.3	Thale cress	mitochondrion	19.76	26.71
AT1G62590.1	Thale cress	mitochondrion	20.36	26.66
AT1G63400.1	Thale cress	cytosol, plastid	18.43	26.52
KRH40400	Soybean	plastid	18.43	26.52
AT1G63150.1	Thale cress	mitochondrion	20.0	26.39
PGSC0003DMT400056663	Potato	plastid	18.67	26.36
KRH41817	Soybean	mitochondrion	17.59	26.31
KRH09082	Soybean	cytosol	12.89	26.23
PGSC0003DMT400056665	Potato	mitochondrion	18.55	26.15
AT1G62914.1	Thale cress	mitochondrion	16.63	26.14
AT1G62910.1	Thale cress	mitochondrion	19.76	25.95
AT1G12620.1	Thale cress	cytosol, mitochondrion	19.4	25.93
Bra026958.1-P	Field mustard	mitochondrion	19.88	25.9
Solyc06g007300.1.1	Tomato	extracellular	18.43	25.84
Bra031731.1-P	Field mustard	mitochondrion	15.78	25.79
PGSC0003DMT400008760	Potato	mitochondrion	18.19	25.77
AT1G63070.1	Thale cress	mitochondrion	18.31	25.76
PGSC0003DMT400053182	Potato	cytosol	18.55	25.71
Solyc04g080120.1.1	Tomato	extracellular	18.92	25.65
Bra026971.1-P	Field mustard	mitochondrion	19.4	25.6
KRH25652	Soybean	cytosol, golgi	16.63	25.56
Bra027029.1-P	Field mustard	mitochondrion	7.47	25.51
KRH31646	Soybean	cytosol	15.9	25.48
PGSC0003DMT400052971	Potato	mitochondrion	18.19	25.46
Bra027658.1-P	Field mustard	cytosol, mitochondrion	16.63	25.41
Bra026954.1-P	Field mustard	mitochondrion	19.88	25.38
Bra025516.1-P	Field mustard	cytosol, mitochondrion	14.58	25.37
Bra036649.1-P	Field mustard	cytosol	11.93	25.32
AT1G12300.1	Thale cress	mitochondrion	19.4	25.27
Bra026836.1-P	Field mustard	cytosol, mitochondrion	14.94	25.25
Bra016762.1-P	Field mustard	mitochondrion	18.43	25.21
PGSC0003DMT400053556	Potato	mitochondrion	13.86	25.05
KRH09095	Soybean	plastid	17.59	24.96
Bra028267.1-P	Field mustard	mitochondrion	18.8	24.92
PGSC0003DMT400015293	Potato	mitochondrion	18.31	24.92
PGSC0003DMT400015298	Potato	mitochondrion	18.31	24.92
AT1G64580.1	Thale cress	mitochondrion	15.66	24.86
AT3G16710.1	Thale cress	mitochondrion	15.18	24.85
KRH09097	Soybean	plastid	17.35	24.7
AT1G12775.1	Thale cress	cytosol, mitochondrion	19.16	24.69
Bra036651.1-P	Field mustard	mitochondrion	15.78	24.49
AT1G12700.2	Thale cress	cytosol	18.19	24.43
AT1G64583.1	Thale cress	mitochondrion	15.06	24.41
AT1G62680.2	Thale cress	plastid	16.02	24.27
Bra026957.1-P	Field mustard	mitochondrion	17.59	24.21
AT1G62720.1	Thale cress	mitochondrion	14.1	24.12
Bra027026.1-P	Field mustard	mitochondrion	15.18	24.09
AT5G41170.1	Thale cress	mitochondrion	15.06	23.72
VIT_14s0030g02260.t01	Wine grape	cytosol	12.41	23.25
AT1G06580.1	Thale cress	mitochondrion	13.98	23.2
CDX68679	Canola	cytosol	3.13	22.61
KRH08599	Soybean	cytosol, plastid	18.19	22.57
Bra026401.1-P	Field mustard	plastid	14.22	22.06
AT4G26800.2	Thale cress	mitochondrion, plastid	13.61	21.98
Bra027726.1-P	Field mustard	mitochondrion	12.41	21.87
AT1G64100.2	Thale cress	cytosol	21.2	21.84
KRH09085	Soybean	mitochondrion	17.47	20.6
Bra027656.1-P	Field mustard	cytosol	22.05	19.45
KRH12873	Soybean	cytosol	16.14	19.25
KRH39064	Soybean	cytosol	20.0	17.13
Bra016758.1-P	Field mustard	plastid	19.52	13.98

Protein Annotations

EnsemblPlants:HORVU1Hr1G014030.2	EnsemblPlantsGene:HORVU1Hr1G014030	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF874
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
UniParc:UPI000B469762	UniProt:A0A287EPG6	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:38708565..38711824

Molecular Weight (calculated)

91889.1 Da

IEP (calculated)

8.469

GRAVY (calculated)

-0.037

Length

830 amino acids

Sequence
(BLAST)

001: MSPTSRIRLR HCSCSTTPMP RIRLRLRRRL SSSTSRPSSS WSPHAAFAAA TERVRAGTLS PQDAHRLFDE LLQQATPVPE RSLNGFLAAL GRAAPSEACR
101: DGPALVLSLF NRVCREEAGM RVAPPTIFTY GVVMNGCCRA RRPELGLAFF GRLLRTGLKA DKTAANTVLK CLCCTKRTDD AVKVLLRRMT ELGCVPDAFS
201: YAIVLKRLCD DNRSQQALDL LRMMAKEEGV CSPDVVTYNT VIHGFFKEGK IGKACNLYHE MMQQGFVPDV VTHNSIINAL CKARAVDNAE LLLRQMVDNG
301: VPPNKVTYTS MIHGYSTLGR WEEATKMFRE MTGRGLIPDI VSWNSFMDSL CKHGRSKEAA EIFYSMAAKG HRPNIVTYGI LLHGYATEGC FADMMSFFNT
401: MKGDGIVANC LVFTILIDAY AKRGMMDEAM LILSEMQGQG LSPDVFTYST LISALCRMGR LADAVDKFNQ MIGTGVQPNT VVYHSLIQGF CTHGDLVKAK
501: ELVYEMMNNG IPRPNIAFFN SIVHSICKEG RVMDAHHIFD LVKDIGERSD IIMFNTLIDG YCLVGEMGKA FSVLDAMISA GIGPDTFTYN TLVNGYFKSG
601: RIDDGLNLFR EMSDKKIKPT TVTYNIILDG LFRAGRTVAA QKMLHEMIGC GTTVSLPTYN IILKGLCRNN CTDEAIVMFQ KLCTMNVKFN ITTLNTMINS
701: MYTVQRREEA KDLFSAISDS GLVPNASTYG IMIRNLLKEG SVEEADNMFS SMEKSGCAPC SRLLNDTIRT LLEKGEIVKA GNYMSKVDGK SISLEASTSS
801: LLLSLFSGKG NYREQIQLLP VKYQFFDGVS

Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)

001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

Arabidopsis Description

RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.