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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • cytosol 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26589 Canola cytosol 10.18 72.46
CDY16033 Canola cytosol 21.38 70.0
Bra026884.1-P Field mustard cytosol 65.17 69.72
CDY16110 Canola extracellular 51.93 62.2
CDY26588 Canola extracellular 38.7 58.64
Bra026971.1-P Field mustard mitochondrion 74.75 58.35
Bra026882.1-P Field mustard cytosol 63.34 58.24
Bra026958.1-P Field mustard mitochondrion 74.54 57.46
Bra028267.1-P Field mustard mitochondrion 72.3 56.71
CDX71969 Canola cytosol 44.4 55.05
Bra031731.1-P Field mustard mitochondrion 56.62 54.72
Bra016762.1-P Field mustard mitochondrion 67.21 54.37
Bra026954.1-P Field mustard mitochondrion 71.69 54.15
AT1G12620.1 Thale cress cytosol, mitochondrion 67.62 53.46
AT1G12300.1 Thale cress mitochondrion 69.25 53.38
AT3G22470.1 Thale cress cytosol, mitochondrion 64.97 51.53
AT1G12775.1 Thale cress cytosol, mitochondrion 64.15 48.91
Bra006187.1-P Field mustard plastid 28.72 48.45
Bra026957.1-P Field mustard mitochondrion 57.23 46.6
Bra027029.1-P Field mustard mitochondrion 23.01 46.5
Bra027636.1-P Field mustard cytosol 28.31 42.9
CDY16032 Canola mitochondrion 34.83 41.91
Bra027658.1-P Field mustard cytosol, mitochondrion 46.23 41.8
Bra036649.1-P Field mustard cytosol 32.18 40.41
Bra027726.1-P Field mustard mitochondrion 37.47 39.07
Bra036651.1-P Field mustard mitochondrion 41.55 38.13
Solyc06g007810.1.1 Tomato cytosol 20.57 37.69
PGSC0003DMT400008759 Potato cytosol 23.83 36.68
Bra027026.1-P Field mustard mitochondrion 38.49 36.14
Bra021192.1-P Field mustard plastid 36.66 35.71
Bra025516.1-P Field mustard cytosol, mitochondrion 34.01 35.01
VIT_12s0028g02320.t01 Wine grape mitochondrion 33.6 34.59
VIT_14s0081g00110.t01 Wine grape cytosol 32.79 32.79
VIT_14s0081g00270.t01 Wine grape plastid 37.68 31.9
PGSC0003DMT400052977 Potato cytosol 25.05 31.62
KRH42744 Soybean mitochondrion 38.09 30.61
Solyc06g005220.2.1 Tomato cytosol 25.05 30.3
VIT_14s0081g00120.t01 Wine grape plastid 35.64 30.02
KRH58843 Soybean nucleus 37.07 29.79
PGSC0003DMT400008757 Potato cytosol 30.14 29.72
Bra016758.1-P Field mustard plastid 69.86 29.59
VIT_14s0030g02260.t01 Wine grape cytosol 26.68 29.57
KRH70370 Soybean cytosol 32.38 29.23
KRH49698 Soybean cytosol 33.2 28.6
VIT_14s0081g00280.t01 Wine grape mitochondrion 37.07 28.48
PGSC0003DMT400025074 Potato cytosol 31.77 28.26
PGSC0003DMT400025087 Potato endoplasmic reticulum 28.31 28.08
Bra026401.1-P Field mustard plastid 30.35 27.85
Solyc06g007300.1.1 Tomato extracellular 33.4 27.7
PGSC0003DMT400008760 Potato mitochondrion 32.79 27.47
VIT_14s0030g02280.t01 Wine grape plastid 31.36 27.45
PGSC0003DMT400052971 Potato mitochondrion 32.99 27.32
KRH75063 Soybean mitochondrion, plastid 33.6 27.32
KRH75045 Soybean mitochondrion 33.2 27.3
Solyc06g007280.2.1 Tomato cytosol 14.05 27.06
PGSC0003DMT400056665 Potato mitochondrion 32.38 26.99
PGSC0003DMT400056663 Potato plastid 32.18 26.87
KRH75048 Soybean mitochondrion 33.2 26.81
PGSC0003DMT400053556 Potato mitochondrion 25.05 26.8
PGSC0003DMT400025067 Potato cytosol 25.66 26.47
Solyc06g007740.1.1 Tomato cytosol 31.57 26.27
PGSC0003DMT400053185 Potato mitochondrion 31.16 25.93
KRH38755 Soybean mitochondrion 31.16 25.76
PGSC0003DMT400053182 Potato cytosol 31.36 25.71
KRH09256 Soybean mitochondrion 28.72 25.22
Bra027656.1-P Field mustard cytosol 44.4 23.17
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 13.03 21.55
PGSC0003DMT400015293 Potato mitochondrion 26.48 21.31
PGSC0003DMT400015298 Potato mitochondrion 26.48 21.31
Solyc04g080120.1.1 Tomato extracellular 26.48 21.24
Os10t0501700-00 Rice cytosol 19.55 21.15
Os10t0495100-01 Rice cytosol, mitochondrion 18.94 20.17
HORVU1Hr1G011250.1 Barley cytosol 12.02 20.0
HORVU1Hr1G018190.2 Barley cytosol 11.41 19.65
TraesCS2B01G126900.1 Wheat cytosol 15.27 19.63
TraesCS1A01G067700.1 Wheat extracellular 13.44 19.58
TraesCS6B01G127200.1 Wheat cytosol 13.65 19.48
TraesCS6B01G114300.1 Wheat cytosol 15.27 19.28
Zm00001d018982_P001 Maize mitochondrion 13.65 19.14
Os08t0248400-01 Rice mitochondrion 17.11 19.09
Os10t0497366-00 Rice mitochondrion 15.48 18.95
TraesCS1D01G058000.1 Wheat cytosol 15.48 18.72
KXG19780 Sorghum cytosol 22.4 18.61
Os08t0107800-01 Rice mitochondrion 23.42 18.43
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 17.92 18.3
KXG34536 Sorghum mitochondrion 21.18 18.18
TraesCS1B01G072700.1 Wheat cytosol 18.74 18.04
Os10t0495200-01 Rice mitochondrion 28.72 18.03
TraesCS6A01G014600.1 Wheat cytosol 14.46 17.97
EER95949 Sorghum mitochondrion 24.24 17.95
TraesCS6D01G083300.1 Wheat mitochondrion 16.29 17.94
TraesCS6A01G015000.1 Wheat mitochondrion 15.07 17.83
Os10t0499500-01 Rice mitochondrion 18.33 17.79
TraesCS6D01G083400.1 Wheat mitochondrion 17.72 17.65
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 18.13 17.62
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 17.92 17.5
TraesCS1D01G058400.1 Wheat cytosol 18.33 17.48
OQU88594 Sorghum cytosol 18.53 17.43
TraesCSU01G089700.1 Wheat mitochondrion 17.11 17.43
OQU82856 Sorghum cytosol 26.68 17.42
EES07882 Sorghum cytosol 27.29 17.25
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 13.24 17.2
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 17.72 17.03
Os10t0497300-01 Rice mitochondrion 27.49 17.0
TraesCSU01G090200.1 Wheat cytosol 15.27 16.97
KXG27690 Sorghum cytosol, plastid 25.25 16.96
TraesCS1D01G069100.1 Wheat mitochondrion 22.2 16.95
TraesCS1B01G038200.1 Wheat mitochondrion 21.79 16.9
TraesCS1A01G073700.1 Wheat cytosol 13.24 16.88
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 24.44 16.81
EES09203 Sorghum cytosol 27.29 16.79
OQU80148 Sorghum mitochondrion 24.85 16.78
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 16.5 16.74
TraesCS6B01G127500.1 Wheat cytosol 16.7 16.73
TraesCS1B01G072400.1 Wheat cytosol 23.63 16.69
TraesCS1B01G092600.1 Wheat plastid 17.52 16.63
TraesCS1D01G068700.1 Wheat cytosol 14.87 16.63
TraesCS6B01G021600.1 Wheat mitochondrion 24.24 16.62
TraesCS1B01G084800.1 Wheat cytosol 15.68 16.59
OQU82823 Sorghum cytosol 26.88 16.56
TraesCS1A01G031600.1 Wheat cytosol 22.2 16.47
OQU82832 Sorghum cytosol 9.57 16.43
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 22.2 16.42
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 23.83 16.36
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 23.83 16.36
TraesCS6D01G083100.1 Wheat cytosol 16.29 16.33
HORVU0Hr1G035310.1 Barley cytosol 19.35 16.32
OQU82827 Sorghum cytosol 26.48 16.31
TraesCS1D01G056700.1 Wheat cytosol 20.16 16.31
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 21.18 16.28
TraesCS6D01G290900.1 Wheat mitochondrion 24.24 16.23
TraesCS6A01G083000.1 Wheat cytosol 15.07 16.23
TraesCS6D01G017800.1 Wheat cytosol 17.72 16.2
TraesCS6D01G047700.1 Wheat mitochondrion 22.61 16.06
TraesCS1D01G055300.1 Wheat cytosol 20.16 16.02
TraesCS7B01G469500.1 Wheat cytosol 18.33 16.01
TraesCS1B01G085900.1 Wheat mitochondrion 26.48 15.97
TraesCS1B01G038400.1 Wheat cytosol 19.76 15.95
OQU82836 Sorghum cytosol 19.76 15.85
Os08t0110200-01 Rice mitochondrion 25.66 15.79
TraesCS1A01G031700.1 Wheat plastid 23.83 15.79
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 22.4 15.78
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 25.05 15.77
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 21.59 15.75
TraesCS1B01G086000.1 Wheat plastid 22.0 15.74
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 22.4 15.74
HORVU6Hr1G014310.1 Barley mitochondrion 22.0 15.72
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 13.85 15.7
TraesCS6D01G076500.1 Wheat plastid 14.46 15.67
TraesCS1A01G056000.1 Wheat cytosol 12.83 15.67
TraesCS1D01G076500.1 Wheat mitochondrion 21.18 15.66
TraesCS1D01G068500.1 Wheat mitochondrion 25.87 15.64
TraesCS1B01G039700.1 Wheat cytosol 19.35 15.62
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 22.61 15.52
TraesCS1A01G067400.1 Wheat mitochondrion 26.07 15.52
TraesCS1B01G085400.1 Wheat cytosol 20.16 15.44
Os10t0497432-01 Rice mitochondrion 8.35 15.41
TraesCS1A01G067600.1 Wheat mitochondrion 25.46 15.38
TraesCS1A01G067000.1 Wheat mitochondrion 22.4 15.36
TraesCS1D01G068800.1 Wheat plastid 25.46 15.32
TraesCS1A01G054700.2 Wheat mitochondrion 25.25 15.27
TraesCS1D01G068900.1 Wheat mitochondrion 25.25 15.25
TraesCS1B01G092500.1 Wheat mitochondrion 24.24 15.2
TraesCS1B01G073100.1 Wheat cytosol 18.74 15.18
TraesCS6D01G017700.1 Wheat plastid 16.5 15.17
TraesCS1D01G056200.1 Wheat mitochondrion 25.46 15.15
TraesCS7D01G231400.1 Wheat cytosol, plastid 12.42 15.14
KXG28799 Sorghum plastid 23.42 15.13
TraesCS1B01G075300.1 Wheat cytosol 18.33 15.08
TraesCS1D01G076900.1 Wheat plastid 20.16 15.07
HORVU6Hr1G076780.7 Barley mitochondrion 25.25 15.05
KXG35774 Sorghum cytosol, mitochondrion 14.46 15.01
OQU82831 Sorghum cytosol 18.74 15.01
TraesCS1A01G054500.1 Wheat mitochondrion 23.83 15.0
Zm00001d007531_P001 Maize plastid 24.85 14.99
Zm00001d007555_P001 Maize plastid 24.85 14.99
Os08t0107700-01 Rice cytosol, mitochondrion 11.41 14.97
TraesCS1D01G076700.1 Wheat cytosol 10.18 14.97
Zm00001d009733_P001 Maize cytosol 24.24 14.97
TraesCS1B01G072300.1 Wheat plastid 17.31 14.96
OQU82833 Sorghum cytosol 13.65 14.96
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 25.25 14.94
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 23.83 14.87
Zm00001d007548_P001 Maize plastid 24.64 14.86
TraesCS1B01G071600.1 Wheat mitochondrion 25.66 14.86
TraesCS1D01G068400.1 Wheat mitochondrion 24.85 14.82
Zm00001d007559_P001 Maize plastid 24.64 14.81
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 23.83 14.77
HORVU1Hr1G010970.1 Barley mitochondrion 24.85 14.77
HORVU1Hr1G014040.1 Barley mitochondrion 25.05 14.77
TraesCS2D01G532500.1 Wheat plastid 20.37 14.71
HORVU1Hr1G004750.6 Barley plastid 23.83 14.66
HORVU0Hr1G031920.1 Barley plastid 25.66 14.65
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 7.54 14.62
TraesCS1A01G057300.1 Wheat cytosol 21.38 14.62
TraesCS1A01G054800.1 Wheat cytosol 17.31 14.6
TraesCS2A01G531000.1 Wheat golgi 20.16 14.58
TraesCSU01G089800.1 Wheat mitochondrion 10.39 14.53
TraesCS2A01G526200.1 Wheat golgi 19.96 14.39
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 14.05 14.38
TraesCS6A01G311600.1 Wheat mitochondrion 24.44 14.35
TraesCS1A01G055500.1 Wheat mitochondrion 6.31 14.29
HORVU1Hr1G011150.1 Barley cytosol, plastid 25.66 14.27
TraesCS2D01G533000.1 Wheat cytosol, extracellular 19.14 14.26
TraesCS1B01G072900.2 Wheat mitochondrion 25.25 14.2
TraesCS1B01G073200.1 Wheat cytosol 8.76 14.19
HORVU1Hr1G011160.2 Barley cytosol, plastid 25.87 14.19
HORVU1Hr1G014060.1 Barley plastid 25.66 14.16
Zm00001d007534_P001 Maize plastid 22.4 14.16
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 9.37 14.15
TraesCS1B01G085300.1 Wheat mitochondrion 22.81 14.14
TraesCS1D01G033000.1 Wheat cytosol 11.61 14.11
HORVU1Hr1G013810.1 Barley plastid 24.03 14.06
TraesCS2B01G560300.1 Wheat cytosol 16.29 14.06
TraesCS1B01G038500.1 Wheat mitochondrion 22.61 14.05
HORVU1Hr1G010890.5 Barley cytosol 25.66 14.03
HORVU6Hr1G017870.2 Barley mitochondrion 8.55 14.0
TraesCS2A01G531100.1 Wheat cytosol 16.09 13.88
TraesCS2D01G532100.1 Wheat mitochondrion 19.55 13.87
TraesCS1B01G039100.1 Wheat mitochondrion 22.0 13.79
TraesCS6B01G341800.2 Wheat cytosol 11.2 13.78
TraesCS1B01G039200.1 Wheat mitochondrion 22.0 13.78
TraesCS1B01G038600.1 Wheat cytosol 10.18 13.77
TraesCS2D01G532400.1 Wheat cytosol 17.11 13.75
HORVU6Hr1G002890.6 Barley cytosol, plastid 22.2 13.71
TraesCS2D01G532600.1 Wheat plastid 21.59 13.66
TraesCS2B01G559900.1 Wheat cytosol 15.07 13.65
TraesCS2D01G532300.1 Wheat plastid 21.59 13.62
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 19.76 13.53
TraesCS1D01G058500.1 Wheat plastid 15.68 13.51
TraesCS1A01G055800.1 Wheat mitochondrion 21.18 13.49
HORVU1Hr1G011300.3 Barley plastid 25.25 13.48
TraesCS2A01G530600.1 Wheat cytosol 20.57 13.2
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 20.57 13.19
TraesCS1A01G067800.1 Wheat cytosol 9.98 13.1
TraesCS1B01G038300.1 Wheat plastid 14.46 13.0
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 11.61 12.98
TraesCS2B01G560700.1 Wheat plastid 20.37 12.97
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 9.78 12.66
Zm00001d009735_P001 Maize cytosol 24.64 12.44
TraesCS1D01G067600.1 Wheat cytosol 9.16 12.33
TraesCS1A01G073800.1 Wheat mitochondrion 8.35 12.31
OQU82834 Sorghum cytosol 23.63 12.05
TraesCS1A01G066600.1 Wheat mitochondrion 6.31 11.79
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 8.15 11.7
TraesCS1A01G074000.1 Wheat mitochondrion 6.72 11.66
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 5.3 11.4
TraesCS1D01G056600.1 Wheat mitochondrion 4.68 11.39
TraesCS1D01G057700.1 Wheat cytosol 7.54 11.38
TraesCS2D01G532200.1 Wheat cytosol 6.52 10.92
TraesCS1D01G068600.1 Wheat plastid 7.54 10.88
TraesCS1A01G055600.1 Wheat cytosol 7.13 10.77
TraesCS1D01G057800.1 Wheat mitochondrion 7.94 10.74
Os04t0351333-00 Rice cytosol 19.14 10.69
Os04t0349600-01 Rice plastid 8.35 10.59
HORVU1Hr1G011400.44 Barley plastid 13.24 10.55
TraesCS1A01G073600.1 Wheat mitochondrion 8.35 10.46
TraesCS1D01G076400.1 Wheat cytosol 7.13 9.64
TraesCS6B01G129100.1 Wheat cytosol, plastid 5.5 9.38
TraesCS1B01G315500.1 Wheat mitochondrion 6.11 9.35
OQU88581 Sorghum cytosol 19.35 8.74
Protein Annotations
EnsemblPlants:Bra026836.1EnsemblPlants:Bra026836.1-PEnsemblPlantsGene:Bra026836Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015
PANTHER:PTHR24015:SF1649PFAM:PF12854PFAM:PF13041PFscan:PS51257PFscan:PS51375SUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI0002542E02UniProt:M4EDH6MapMan:35.1::
Description
AT1G12300 (E=1e-127) | pentatricopeptide (PPR) repeat-containing protein
Coordinates
chrA09:+:33925562..33927323
Molecular Weight (calculated)
54810.6 Da
IEP (calculated)
7.901
GRAVY (calculated)
0.008
Length
491 amino acids
Sequence
(BLAST)
001: MLCRRLVLEP RIPPLTTHNL LSCFLLSCER GFSGDGKMSC YKEKLRNGLI NIKKDEAVAL FQSMLRSRPL PTLIDFRIPH NIYTLSIVIN FFCRSRKLGF
101: AFSALINGLC LVGRVSQAVE LVDRMVEMKV IPNLITLVNG LCLQDRVSEA VALIDRMVKN GCQPDAFTYG PILNRMCKSG RWKIERKSHR CALIDSLVKE
201: GKFSEAKELY NEMITRGIDP DTITYNSLIY GLCMENRLDE ANQMMNLMVS KGCDPSIVTY NTLINGYCKA KMVDDATRLF RKMSPRGVVA DSVTYNTLIQ
301: GFCQSGQLNV AKELFQEMVS EGVHPNIMTY GILLDALCDN GELEEALGIL EKMHKTNMEL DIGVYNIIIH GMCNAHKVDD AWDLFCSLSL KGVKPDVKTY
401: TIMIGGLCKK GSMSEAGLLF KKMGEDGIAP DDCTYNTLIR AHLRGGDVAT SAKLIEEMKS CGFSSDASTV KIVMDMLSDG RMKKSFLDML S
Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)
001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.