Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G090200.1 Wheat cytosol 80.71 88.01
TraesCSU01G089800.1 Wheat mitochondrion 61.2 84.05
HORVU1Hr1G018190.2 Barley cytosol 47.3 80.0
Os10t0495100-01 Rice cytosol, mitochondrion 51.04 53.36
Os08t0248400-01 Rice mitochondrion 46.68 51.14
Os10t0497432-01 Rice mitochondrion 27.18 49.25
Os10t0497366-00 Rice mitochondrion 40.87 49.13
Zm00001d018982_P001 Maize mitochondrion 35.48 48.86
TraesCS6D01G017800.1 Wheat cytosol 53.32 47.86
HORVU6Hr1G002890.6 Barley cytosol, plastid 78.01 47.3
Os08t0107700-01 Rice cytosol, mitochondrion 36.31 46.79
OQU88594 Sorghum cytosol 49.79 45.98
Os10t0499500-01 Rice mitochondrion 45.44 43.28
EER95949 Sorghum mitochondrion 56.64 41.18
KXG34536 Sorghum mitochondrion 45.23 38.11
Os08t0107800-01 Rice mitochondrion 48.55 37.5
Os10t0501700-00 Rice cytosol 33.61 35.68
Os10t0495200-01 Rice mitochondrion 53.94 33.25
Solyc06g007280.2.1 Tomato cytosol 17.01 32.16
Os10t0497300-01 Rice mitochondrion 52.49 31.86
KRH40513 Soybean plastid 21.16 29.06
Zm00001d009733_P001 Maize cytosol 47.51 28.8
Os08t0110200-01 Rice mitochondrion 47.3 28.57
Bra036649.1-P Field mustard cytosol 20.54 25.32
Bra027029.1-P Field mustard mitochondrion 12.66 25.1
VIT_12s0028g02320.t01 Wine grape mitochondrion 24.69 24.95
KRH39054 Soybean cytosol 25.52 24.75
KRH39004 Soybean cytosol 25.31 24.55
KRH41817 Soybean mitochondrion 28.22 24.5
AT1G62914.1 Thale cress mitochondrion 26.76 24.43
Zm00001d009735_P001 Maize cytosol 48.55 24.05
KRH39074 Soybean cytosol 24.69 23.94
KRH39057 Soybean cytosol 24.27 23.54
KRH39050 Soybean mitochondrion 25.73 23.31
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 25.31 23.24
KRH39072 Soybean cytosol 23.86 23.19
AT1G63330.2 Thale cress cytosol 26.76 23.08
AT5G16640.1 Thale cress mitochondrion 23.86 22.82
KRH31646 Soybean cytosol 24.48 22.78
AT1G63400.1 Thale cress cytosol, plastid 27.18 22.7
KRH39112 Soybean cytosol 23.24 22.54
Solyc06g005220.2.1 Tomato cytosol 18.88 22.41
AT3G22470.1 Thale cress cytosol, mitochondrion 28.42 22.13
AT1G62930.1 Thale cress plastid 28.84 22.1
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 23.03 21.98
VIT_14s0030g02280.t01 Wine grape plastid 25.31 21.75
AT1G62910.1 Thale cress mitochondrion 28.42 21.68
KRH39066 Soybean cytosol 24.9 21.62
Bra036651.1-P Field mustard mitochondrion 23.86 21.5
AT1G62720.1 Thale cress mitochondrion 21.58 21.44
VIT_14s0081g00120.t01 Wine grape plastid 25.93 21.44
Bra016762.1-P Field mustard mitochondrion 26.97 21.42
AT1G63130.1 Thale cress mitochondrion 27.8 21.27
KRH08636 Soybean cytosol 23.03 21.26
AT1G12620.1 Thale cress cytosol, mitochondrion 27.39 21.26
Bra025516.1-P Field mustard cytosol, mitochondrion 20.95 21.17
AT1G63080.3 Thale cress mitochondrion 26.97 21.17
AT1G62670.1 Thale cress mitochondrion 27.59 21.11
Bra026958.1-P Field mustard mitochondrion 27.8 21.04
AT1G63150.1 Thale cress mitochondrion 27.39 20.99
Bra026882.1-P Field mustard cytosol 23.24 20.97
AT3G16710.1 Thale cress mitochondrion 21.99 20.91
AT1G63070.1 Thale cress mitochondrion 25.52 20.85
Bra026971.1-P Field mustard mitochondrion 27.18 20.83
AT1G62590.1 Thale cress mitochondrion 27.39 20.82
KRH08277 Soybean plastid 24.48 20.81
KRH48615 Soybean mitochondrion 23.44 20.73
KRH08639 Soybean mitochondrion, plastid 24.27 20.71
PGSC0003DMT400053556 Potato mitochondrion 19.71 20.7
KRH08628 Soybean plastid 23.65 20.65
AT1G64580.1 Thale cress mitochondrion 22.41 20.65
Bra026954.1-P Field mustard mitochondrion 27.8 20.62
KRH08671 Soybean cytosol, mitochondrion 23.65 20.61
AT1G06580.1 Thale cress mitochondrion 21.37 20.6
AT1G12300.1 Thale cress mitochondrion 27.18 20.57
KRH17148 Soybean mitochondrion 23.24 20.55
Solyc06g007740.1.1 Tomato cytosol 25.1 20.51
PGSC0003DMT400008757 Potato cytosol 21.16 20.48
Bra028267.1-P Field mustard mitochondrion 26.56 20.45
Bra027636.1-P Field mustard cytosol 13.69 20.37
KRH09084 Soybean plastid 21.58 20.35
KRH08607 Soybean cytosol 23.65 20.32
PGSC0003DMT400025074 Potato cytosol 23.24 20.29
Bra027026.1-P Field mustard mitochondrion 21.99 20.27
AT1G12775.1 Thale cress cytosol, mitochondrion 26.76 20.03
VIT_14s0081g00270.t01 Wine grape plastid 24.07 20.0
KRH40400 Soybean plastid 23.86 19.93
AT4G26800.2 Thale cress mitochondrion, plastid 21.16 19.84
Bra021192.1-P Field mustard plastid 20.75 19.84
PGSC0003DMT400025087 Potato endoplasmic reticulum 20.12 19.6
Solyc06g007300.1.1 Tomato extracellular 24.07 19.59
VIT_14s0081g00280.t01 Wine grape mitochondrion 25.93 19.56
VIT_14s0081g00110.t01 Wine grape cytosol 19.92 19.55
AT1G64583.1 Thale cress mitochondrion 20.75 19.53
PGSC0003DMT400053185 Potato mitochondrion 23.86 19.49
KRH08625 Soybean plastid 23.24 19.44
Bra026884.1-P Field mustard cytosol 18.46 19.39
KRH25652 Soybean cytosol, golgi 21.58 19.26
AT1G62680.2 Thale cress plastid 21.78 19.16
PGSC0003DMT400056663 Potato plastid 23.24 19.05
KRH09121 Soybean mitochondrion 20.95 18.91
PGSC0003DMT400025067 Potato cytosol 18.67 18.91
Bra031731.1-P Field mustard mitochondrion 19.92 18.9
KRH09154 Soybean mitochondrion 21.78 18.88
PGSC0003DMT400056665 Potato mitochondrion 23.03 18.85
AT5G41170.1 Thale cress mitochondrion 20.54 18.79
Bra027658.1-P Field mustard cytosol, mitochondrion 21.16 18.78
PGSC0003DMT400008760 Potato mitochondrion 22.82 18.77
PGSC0003DMT400052977 Potato cytosol 15.15 18.77
Bra026957.1-P Field mustard mitochondrion 23.44 18.74
Bra027726.1-P Field mustard mitochondrion 18.26 18.68
Bra006187.1-P Field mustard plastid 11.2 18.56
PGSC0003DMT400053182 Potato cytosol 22.82 18.36
PGSC0003DMT400052971 Potato mitochondrion 22.41 18.21
AT1G12700.2 Thale cress cytosol 23.24 18.12
PGSC0003DMT400015293 Potato mitochondrion 22.82 18.03
PGSC0003DMT400015298 Potato mitochondrion 22.82 18.03
Solyc04g080120.1.1 Tomato extracellular 22.41 17.65
KRH09095 Soybean plastid 21.16 17.44
KRH09097 Soybean plastid 20.95 17.32
KRH08599 Soybean cytosol, plastid 23.86 17.19
Bra026836.1-P Field mustard cytosol, mitochondrion 17.43 17.11
KRH09082 Soybean cytosol 14.32 16.91
Bra026401.1-P Field mustard plastid 17.84 16.07
OQU88581 Sorghum cytosol 36.1 16.01
PGSC0003DMT400008759 Potato cytosol 10.37 15.67
AT1G64100.2 Thale cress cytosol 25.52 15.26
Solyc06g007810.1.1 Tomato cytosol 8.09 14.55
KRH12873 Soybean cytosol 20.75 14.37
KRH09085 Soybean mitochondrion 20.33 13.92
KRH39064 Soybean cytosol 26.56 13.21
Bra027656.1-P Field mustard cytosol 25.73 13.18
VIT_14s0030g02260.t01 Wine grape cytosol 12.03 13.09
Bra016758.1-P Field mustard plastid 25.52 10.61
CDX68679 Canola cytosol 0.21 0.87
Protein Annotations
EnsemblPlants:TraesCSU01G089700.1EnsemblPlantsGene:TraesCSU01G089700Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:PPR_longInterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149
PANTHER:PTHR44149:SF3PFAM:PF01535PFAM:PF12854PFAM:PF13041PFAM:PF17177PFscan:PS51375
TIGRFAMs:TIGR00756MapMan:35.1::::
Description
No Description!
Coordinates
chrUn:+:79930578..79938555
Molecular Weight (calculated)
53362.1 Da
IEP (calculated)
6.936
GRAVY (calculated)
0.050
Length
482 amino acids
Sequence
(BLAST)
001: MSRRLVPVDR RILEQNIKAR YHAGDIGTQD ALHLFDELLQ CAGSSSIRAI NYLVTTVGRD CPALGVSLFN RVASANVAPN SITYTILVDC CCRAGRLDLG
101: FAAMGHIIKM GFAADAIVTF SHLLNAICAE KKTSYAMDIV LRIMPMFNCV PNIFSYSILF KGLCNEKRSQ EALELIQVMV EHGGSCQPNV VSYSTVIDGL
201: LKEGLVGKAY SLFCEMLQRG ISPNAVTCSS IISGMCKAQS MDKSEEVLQQ MLDRRILPDV TTYNSLIHGY YSSGRCKEVD RIFQEMSRNG VQPNIVTYNI
301: QMDYLCKSGR CAEARKIFDS MIGLGQKPDV TTYSILLHGS AMEKSFHEMH CLIDLMVGNG ISPDHHVYNI LISAYAKEET VGEVMHIFTK MRQQGLNPNV
401: ANYGAAVNLL SKIGRMDDAM SQFNQMITEG LAPDIIVFTP LISGFCSCGK WEKVDELFSE MLDRGICPNS VLQHNYGPPL QK
Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)
001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.