Factsheet for HORVU1Hr1G018190.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G015000.1	Wheat	mitochondrion	74.04	50.84
TraesCSU01G090200.1	Wheat	cytosol	77.89	50.23
TraesCSU01G089700.1	Wheat	mitochondrion	80.0	47.3
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.42	46.46
TraesCSU01G089800.1	Wheat	mitochondrion	57.19	46.44
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	60.7	45.65
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	51.23	44.92
Zm00001d018982_P001	Maize	mitochondrion	50.53	41.14
HORVU6Hr1G017870.2	Barley	mitochondrion	40.0	38.0
Os10t0497366-00	Rice	mitochondrion	52.63	37.41
Os08t0248400-01	Rice	mitochondrion	56.14	36.36
TraesCS6D01G017800.1	Wheat	cytosol	67.72	35.94
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	31.23	35.18
HORVU6Hr1G002890.6	Barley	cytosol, plastid	95.44	34.21
HORVU1Hr1G011250.1	Barley	cytosol	34.39	33.22
Os10t0495100-01	Rice	cytosol, mitochondrion	53.33	32.97
Os08t0107700-01	Rice	cytosol, mitochondrion	43.16	32.89
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	82.46	32.87
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	78.95	31.47
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	78.6	31.37
Solyc06g007280.2.1	Tomato	cytosol	27.72	30.98
TraesCS6B01G021600.1	Wheat	mitochondrion	77.19	30.73
Os10t0499500-01	Rice	mitochondrion	54.39	30.63
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	76.84	30.63
HORVU6Hr1G014310.1	Barley	mitochondrion	72.28	29.99
TraesCS6D01G017700.1	Wheat	plastid	54.74	29.21
Os10t0501700-00	Rice	cytosol	44.91	28.19
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	44.21	26.25
Os10t0497432-01	Rice	mitochondrion	23.86	25.56
OQU88594	Sorghum	cytosol	46.67	25.48
Os08t0107800-01	Rice	mitochondrion	55.09	25.16
EER95949	Sorghum	mitochondrion	54.74	23.53
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.72	21.28
Os10t0497300-01	Rice	mitochondrion	57.54	20.65
TraesCS6A01G014600.1	Wheat	cytosol	28.42	20.51
Os10t0495200-01	Rice	mitochondrion	55.79	20.33
Solyc06g005220.2.1	Tomato	cytosol	28.07	19.7
KXG34536	Sorghum	mitochondrion	39.3	19.58
Zm00001d009733_P001	Maize	cytosol	52.63	18.87
HORVU0Hr1G035310.1	Barley	cytosol	38.25	18.73
Bra027029.1-P	Field mustard	mitochondrion	15.79	18.52
Os08t0110200-01	Rice	mitochondrion	49.82	17.79
Bra026884.1-P	Field mustard	cytosol	28.07	17.43
Bra036649.1-P	Field mustard	cytosol	23.86	17.39
VIT_14s0081g00110.t01	Wine grape	cytosol	29.82	17.31
Bra027636.1-P	Field mustard	cytosol	19.65	17.28
VIT_12s0028g02320.t01	Wine grape	mitochondrion	28.77	17.19
KRH40513	Soybean	plastid	21.05	17.09
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	41.75	17.02
HORVU1Hr1G010970.1	Barley	mitochondrion	48.77	16.83
HORVU1Hr1G014040.1	Barley	mitochondrion	49.12	16.81
PGSC0003DMT400052977	Potato	cytosol	22.81	16.71
KRH39050	Soybean	mitochondrion	30.88	16.54
KRH09082	Soybean	cytosol	23.51	16.42
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	47.72	16.39
HORVU0Hr1G031920.1	Barley	plastid	49.12	16.28
HORVU6Hr1G076780.7	Barley	mitochondrion	46.67	16.14
KRH39004	Soybean	cytosol	28.07	16.1
KRH39054	Soybean	cytosol	28.07	16.1
KRH39112	Soybean	cytosol	28.07	16.1
KRH31646	Soybean	cytosol	29.12	16.02
HORVU1Hr1G013810.1	Barley	plastid	47.02	15.97
HORVU1Hr1G011150.1	Barley	cytosol, plastid	48.42	15.63
HORVU1Hr1G011160.2	Barley	cytosol, plastid	48.77	15.53
HORVU1Hr1G014060.1	Barley	plastid	48.42	15.51
HORVU1Hr1G010890.5	Barley	cytosol	48.77	15.48
AT1G63330.2	Thale cress	cytosol	30.18	15.38
AT1G62914.1	Thale cress	mitochondrion	28.42	15.34
PGSC0003DMT400025067	Potato	cytosol	25.61	15.34
KRH39057	Soybean	cytosol	26.67	15.29
KRH39074	Soybean	cytosol	26.67	15.29
Zm00001d009735_P001	Maize	cytosol	51.93	15.21
KRH08636	Soybean	cytosol	27.72	15.13
HORVU1Hr1G011300.3	Barley	plastid	48.77	15.11
KRH09084	Soybean	plastid	27.02	15.07
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	27.72	15.05
KRH41817	Soybean	mitochondrion	29.12	14.96
HORVU1Hr1G004750.6	Barley	plastid	41.75	14.91
PGSC0003DMT400025087	Potato	endoplasmic reticulum	25.61	14.75
KRH39072	Soybean	cytosol	25.61	14.72
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	25.96	14.65
KRH09121	Soybean	mitochondrion	27.37	14.61
KRH39066	Soybean	cytosol	28.42	14.59
AT1G63080.3	Thale cress	mitochondrion	31.23	14.5
VIT_14s0081g00120.t01	Wine grape	plastid	29.47	14.41
PGSC0003DMT400008757	Potato	cytosol	24.91	14.26
Solyc06g007740.1.1	Tomato	cytosol	29.47	14.24
KRH08607	Soybean	cytosol	27.72	14.08
VIT_14s0030g02280.t01	Wine grape	plastid	27.72	14.08
PGSC0003DMT400025074	Potato	cytosol	27.02	13.95
AT1G63400.1	Thale cress	cytosol, plastid	28.07	13.86
AT1G63130.1	Thale cress	mitochondrion	30.53	13.81
VIT_14s0081g00270.t01	Wine grape	plastid	28.07	13.79
AT1G62910.1	Thale cress	mitochondrion	30.53	13.77
KRH48615	Soybean	mitochondrion	26.32	13.76
AT1G63070.1	Thale cress	mitochondrion	28.42	13.73
Solyc06g007300.1.1	Tomato	extracellular	28.42	13.68
KRH08639	Soybean	mitochondrion, plastid	27.02	13.63
AT1G62590.1	Thale cress	mitochondrion	30.18	13.56
KRH08671	Soybean	cytosol, mitochondrion	26.32	13.56
AT1G62930.1	Thale cress	plastid	29.82	13.51
AT1G63150.1	Thale cress	mitochondrion	29.82	13.51
PGSC0003DMT400053556	Potato	mitochondrion	21.75	13.51
AT1G62670.1	Thale cress	mitochondrion	29.82	13.49
KRH17148	Soybean	mitochondrion	25.61	13.39
Bra026958.1-P	Field mustard	mitochondrion	29.82	13.34
Bra026882.1-P	Field mustard	cytosol	24.91	13.3
PGSC0003DMT400056665	Potato	mitochondrion	27.37	13.24
AT3G22470.1	Thale cress	cytosol, mitochondrion	28.42	13.09
KRH08277	Soybean	plastid	25.96	13.05
KRH08628	Soybean	plastid	25.26	13.04
KRH40400	Soybean	plastid	26.32	13.0
PGSC0003DMT400052971	Potato	mitochondrion	27.02	12.98
KRH25652	Soybean	cytosol, golgi	24.56	12.96
PGSC0003DMT400056663	Potato	plastid	26.67	12.93
PGSC0003DMT400053185	Potato	mitochondrion	26.67	12.88
VIT_14s0081g00280.t01	Wine grape	mitochondrion	28.77	12.83
PGSC0003DMT400008760	Potato	mitochondrion	26.32	12.8
AT1G62720.1	Thale cress	mitochondrion	21.75	12.78
KRH09154	Soybean	mitochondrion	24.91	12.77
Bra027658.1-P	Field mustard	cytosol, mitochondrion	24.21	12.71
Bra016762.1-P	Field mustard	mitochondrion	27.02	12.69
KRH09095	Soybean	plastid	25.96	12.65
Bra028267.1-P	Field mustard	mitochondrion	27.72	12.62
Bra026954.1-P	Field mustard	mitochondrion	28.77	12.62
Bra025516.1-P	Field mustard	cytosol, mitochondrion	21.05	12.58
Bra026971.1-P	Field mustard	mitochondrion	27.72	12.56
AT1G12300.1	Thale cress	mitochondrion	28.07	12.56
Bra036651.1-P	Field mustard	mitochondrion	23.51	12.52
Bra027026.1-P	Field mustard	mitochondrion	22.81	12.43
KRH09097	Soybean	plastid	25.26	12.35
KRH08625	Soybean	plastid	24.91	12.33
AT1G12620.1	Thale cress	cytosol, mitochondrion	26.67	12.24
PGSC0003DMT400008759	Potato	cytosol	13.68	12.23
AT5G16640.1	Thale cress	mitochondrion	21.05	11.9
AT1G64580.1	Thale cress	mitochondrion	21.75	11.85
Bra031731.1-P	Field mustard	mitochondrion	21.05	11.81
PGSC0003DMT400015293	Potato	mitochondrion	25.26	11.8
PGSC0003DMT400015298	Potato	mitochondrion	25.26	11.8
OQU88581	Sorghum	cytosol	44.56	11.68
AT1G12775.1	Thale cress	cytosol, mitochondrion	26.32	11.65
Solyc04g080120.1.1	Tomato	extracellular	24.91	11.6
AT1G06580.1	Thale cress	mitochondrion	20.35	11.6
AT1G64583.1	Thale cress	mitochondrion	20.7	11.52
PGSC0003DMT400053182	Potato	cytosol	24.21	11.52
Bra026836.1-P	Field mustard	cytosol, mitochondrion	19.65	11.41
Bra006187.1-P	Field mustard	plastid	11.58	11.34
AT1G62680.2	Thale cress	plastid	21.75	11.31
AT3G16710.1	Thale cress	mitochondrion	20.0	11.24
KRH08599	Soybean	cytosol, plastid	26.32	11.21
AT5G41170.1	Thale cress	mitochondrion	20.7	11.2
Bra021192.1-P	Field mustard	plastid	19.3	10.91
AT4G26800.2	Thale cress	mitochondrion, plastid	19.65	10.89
AT1G12700.2	Thale cress	cytosol	22.81	10.52
KRH12873	Soybean	cytosol	25.61	10.49
Bra026957.1-P	Field mustard	mitochondrion	22.11	10.45
VIT_14s0030g02260.t01	Wine grape	cytosol	15.44	9.93
KRH09085	Soybean	mitochondrion	24.21	9.8
AT1G64100.2	Thale cress	cytosol	26.67	9.43
HORVU1Hr1G011400.44	Barley	plastid	19.65	9.09
Solyc06g007810.1.1	Tomato	cytosol	8.42	8.96
Bra026401.1-P	Field mustard	plastid	15.79	8.41
Bra027656.1-P	Field mustard	cytosol	27.02	8.18
KRH39064	Soybean	cytosol	27.72	8.15
Bra027726.1-P	Field mustard	mitochondrion	13.33	8.07
Bra016758.1-P	Field mustard	plastid	28.42	6.99
CDX68679	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G018190.2	EnsemblPlantsGene:HORVU1Hr1G018190	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR44149	PANTHER:PTHR44149:SF3
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	TIGRFAMs:TIGR00756	UniParc:UPI000B467510
UniProt:A0A287ESI9	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:65994535..65997560

Molecular Weight (calculated)

31766.8 Da

IEP (calculated)

6.336

GRAVY (calculated)

0.043

Length

285 amino acids

Sequence
(BLAST)

001: MDIVLRVMPA FDCVPDIFSY TILFKGLCSE KRSQEALELI HMMVEHGGSC RPDVVSYSTV IDGLLKDGLV DKAYSLYCEM LQTGILPNAV TYNSIISAMC
101: KVHAMDKAKE AVHQMSDRGI LPDVATYTSP IHGYYSLGRC KEVDRIFTEM SRNGVQPNIV TYNIQMDYLC KNGRCAEARK IFDSMVCLGQ KPTVTTYGIL
201: LHGYAMERSF HDMHCLIDLM TENGISPGHY AYNILISAAA KEEMVGDVLH IFTKMRRQGL NPDVVTYGAV INLLSGIGRM DDAMS

Best Arabidopsis Sequence Match ( AT1G62910.1 )
(BLAST)

001: MQRSISLTAK RLFVHWNLQG IGNPPTVPSF FNLCGSGCWE RSFASASGDY REILRNRLSD IIKVDDAVDL FGDMVKSRPF PSIVEFNKLL SAVAKMNKFE
101: LVISLGEQMQ TLGISHDLYT YSIFINCFCR RSQLSLALAV LAKMMKLGYE PDIVTLSSLL NGYCHSKRIS DAVALVDQMV EMGYKPDTFT FTTLIHGLFL
201: HNKASEAVAL VDQMVQRGCQ PDLVTYGTVV NGLCKRGDID LALSLLKKME KGKIEADVVI YNTIIDGLCK YKHMDDALNL FTEMDNKGIR PDVFTYSSLI
301: SCLCNYGRWS DASRLLSDMI ERKINPNVVT FSALIDAFVK EGKLVEAEKL YDEMIKRSID PDIFTYSSLI NGFCMHDRLD EAKHMFELMI SKDCFPNVVT
401: YSTLIKGFCK AKRVEEGMEL FREMSQRGLV GNTVTYTTLI HGFFQARDCD NAQMVFKQMV SVGVHPNILT YNILLDGLCK NGKLAKAMVV FEYLQRSTME
501: PDIYTYNIMI EGMCKAGKVE DGWELFCNLS LKGVSPNVIA YNTMISGFCR KGSKEEADSL LKKMKEDGPL PNSGTYNTLI RARLRDGDRE ASAELIKEMR
601: SCGFAGDAST IGLVTNMLHD GRLDKSFLDM LS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g62910 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.