CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	EER91265	AT4G26630.1	25387881
AT1G62670.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G076700.1	Wheat	cytosol	34.04	48.2
TraesCS1D01G058400.1	Wheat	cytosol	50.32	46.21
TraesCS1D01G057700.1	Wheat	cytosol	31.5	45.85
TraesCS1D01G033000.1	Wheat	cytosol	39.11	45.79
TraesCS1A01G056000.1	Wheat	cytosol	38.69	45.52
TraesCS1A01G055600.1	Wheat	cytosol	31.08	45.23
TraesCS6B01G341800.2	Wheat	cytosol	37.63	44.61
TraesCS1A01G067800.1	Wheat	cytosol	34.25	43.32
TraesCS1B01G038600.1	Wheat	cytosol	32.98	42.98
Zm00001d007534_P001	Maize	plastid	70.19	42.73
HORVU0Hr1G035310.1	Barley	cytosol	51.37	41.75
TraesCS1D01G067600.1	Wheat	cytosol	32.14	41.64
TraesCS1B01G075300.1	Wheat	cytosol	52.22	41.37
KXG28799	Sorghum	plastid	65.54	40.79
TraesCS1B01G038400.1	Wheat	cytosol	52.43	40.79
TraesCS1B01G039700.1	Wheat	cytosol	52.43	40.79
Zm00001d007548_P001	Maize	plastid	69.98	40.66
Zm00001d007531_P001	Maize	plastid	69.77	40.54
Zm00001d007555_P001	Maize	plastid	69.56	40.42
Zm00001d007559_P001	Maize	plastid	69.77	40.39
TraesCS1A01G073700.1	Wheat	cytosol	32.77	40.26
TraesCS1D01G068700.1	Wheat	cytosol	37.21	40.09
HORVU1Hr1G011250.1	Barley	cytosol	24.31	38.98
TraesCS1A01G054800.1	Wheat	cytosol	47.57	38.66
TraesCS1B01G073100.1	Wheat	cytosol	49.47	38.61
TraesCS1D01G056700.1	Wheat	cytosol	49.05	38.22
TraesCS2B01G126900.1	Wheat	cytosol	30.66	37.96
TraesCS1B01G084800.1	Wheat	cytosol	37.0	37.72
TraesCS1A01G031600.1	Wheat	cytosol	52.64	37.61
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.32	37.25
TraesCS1D01G055300.1	Wheat	cytosol	48.63	37.22
TraesCS1B01G085400.1	Wheat	cytosol	50.11	36.97
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	51.16	35.96
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	51.59	35.01
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	51.37	34.76
TraesCS1B01G072400.1	Wheat	cytosol	50.32	34.24
OQU82833	Sorghum	cytosol	32.35	34.15
TraesCS1D01G076500.1	Wheat	mitochondrion	47.78	34.04
TraesCS1A01G057300.1	Wheat	cytosol	51.16	33.7
TraesCS1D01G076400.1	Wheat	cytosol	25.58	33.33
OQU82831	Sorghum	cytosol	42.92	33.12
TraesCS1B01G038500.1	Wheat	mitochondrion	55.18	33.04
TraesCS1A01G067000.1	Wheat	mitochondrion	49.68	32.82
TraesCS1B01G072700.1	Wheat	cytosol	34.67	32.16
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	45.03	32.08
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	53.49	31.94
TraesCS1B01G039200.1	Wheat	mitochondrion	52.85	31.89
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	52.85	31.77
TraesCS1A01G031700.1	Wheat	plastid	49.05	31.31
TraesCS1B01G039100.1	Wheat	mitochondrion	51.8	31.29
TraesCS1A01G073600.1	Wheat	mitochondrion	25.58	30.87
HORVU1Hr1G013810.1	Barley	plastid	54.55	30.75
TraesCS1A01G067600.1	Wheat	mitochondrion	52.43	30.5
HORVU1Hr1G004750.6	Barley	plastid	51.37	30.45
TraesCS1A01G054500.1	Wheat	mitochondrion	50.11	30.38
TraesCS1A01G055800.1	Wheat	mitochondrion	49.47	30.35
OQU82836	Sorghum	cytosol	39.11	30.23
TraesCS1B01G085900.1	Wheat	mitochondrion	51.8	30.1
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.82	29.97
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	48.41	29.9
TraesCS1D01G068900.1	Wheat	mitochondrion	51.37	29.89
TraesCS1B01G085300.1	Wheat	mitochondrion	49.89	29.8
HORVU6Hr1G076780.7	Barley	mitochondrion	51.59	29.61
TraesCS1A01G067400.1	Wheat	mitochondrion	51.59	29.58
TraesCS1D01G056200.1	Wheat	mitochondrion	51.59	29.58
TraesCS1D01G068400.1	Wheat	mitochondrion	51.37	29.53
TraesCS1D01G068800.1	Wheat	plastid	50.74	29.41
TraesCS1A01G054700.2	Wheat	mitochondrion	49.89	29.06
HORVU1Hr1G010970.1	Barley	mitochondrion	50.74	29.06
TraesCS6A01G311600.1	Wheat	mitochondrion	51.16	28.95
TraesCS1D01G068500.1	Wheat	mitochondrion	49.47	28.82
TraesCS1B01G038300.1	Wheat	plastid	33.19	28.75
TraesCS1B01G038200.1	Wheat	mitochondrion	38.48	28.75
HORVU1Hr1G014040.1	Barley	mitochondrion	50.53	28.69
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	50.32	28.67
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	47.15	28.59
TraesCS1B01G072900.2	Wheat	mitochondrion	52.22	28.29
HORVU0Hr1G031920.1	Barley	plastid	51.37	28.26
TraesCS1B01G092500.1	Wheat	mitochondrion	46.72	28.22
KXG27690	Sorghum	cytosol, plastid	43.34	28.04
TraesCS1D01G069100.1	Wheat	mitochondrion	38.05	27.99
TraesCS6D01G290900.1	Wheat	mitochondrion	43.13	27.83
CDX68679	Canola	cytosol	6.77	27.83
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	42.07	27.75
OQU80148	Sorghum	mitochondrion	42.49	27.65
TraesCS1B01G071600.1	Wheat	mitochondrion	48.41	27.0
HORVU1Hr1G014060.1	Barley	plastid	50.53	26.85
TraesCS6B01G127200.1	Wheat	cytosol	19.45	26.74
KXG19780	Sorghum	cytosol	33.4	26.73
EES07882	Sorghum	cytosol	43.76	26.64
HORVU1Hr1G011160.2	Barley	cytosol, plastid	50.11	26.48
HORVU1Hr1G011150.1	Barley	cytosol, plastid	49.26	26.39
HORVU1Hr1G010890.5	Barley	cytosol	49.89	26.28
OQU82823	Sorghum	cytosol	43.76	25.97
OQU82827	Sorghum	cytosol	43.76	25.97
HORVU1Hr1G011300.3	Barley	plastid	50.32	25.87
TraesCS1D01G058000.1	Wheat	cytosol	21.99	25.62
TraesCS1D01G058500.1	Wheat	plastid	30.87	25.61
TraesCS1B01G073200.1	Wheat	cytosol	16.28	25.41
Os04t0351333-00	Rice	cytosol	47.15	25.37
PGSC0003DMT400052977	Potato	cytosol	20.72	25.19
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	20.08	25.13
EES09203	Sorghum	cytosol	42.07	24.94
Bra027636.1-P	Field mustard	cytosol	16.91	24.69
TraesCS1B01G086000.1	Wheat	plastid	35.73	24.64
KXG34536	Sorghum	mitochondrion	28.12	23.25
Solyc06g007280.2.1	Tomato	cytosol	12.47	23.14
TraesCS1D01G076900.1	Wheat	plastid	31.71	22.83
PGSC0003DMT400008759	Potato	cytosol	15.22	22.57
HORVU1Hr1G011400.44	Barley	plastid	29.39	22.56
VIT_14s0081g00110.t01	Wine grape	cytosol	23.26	22.4
TraesCS1A01G067700.1	Wheat	extracellular	15.22	21.36
KRH39004	Soybean	cytosol	22.41	21.33
TraesCS6D01G083300.1	Wheat	mitochondrion	20.08	21.3
OQU88594	Sorghum	cytosol	23.47	21.26
Solyc06g005220.2.1	Tomato	cytosol	18.18	21.18
KRH09082	Soybean	cytosol	18.18	21.08
VIT_12s0028g02320.t01	Wine grape	mitochondrion	20.93	20.75
KRH39054	Soybean	cytosol	21.78	20.72
Bra026884.1-P	Field mustard	cytosol	20.08	20.7
OQU82834	Sorghum	cytosol	42.07	20.66
KRH39072	Soybean	cytosol	21.56	20.56
KRH39057	Soybean	cytosol	21.35	20.32
EER95949	Sorghum	mitochondrion	28.33	20.21
Solyc06g007810.1.1	Tomato	cytosol	11.42	20.15
KRH39074	Soybean	cytosol	21.14	20.12
KRH40513	Soybean	plastid	14.8	19.94
PGSC0003DMT400025067	Potato	cytosol	19.87	19.75
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	19.87	19.54
KRH39112	Soybean	cytosol	20.51	19.52
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	19.87	19.42
OQU82856	Sorghum	cytosol	30.87	19.41
PGSC0003DMT400025087	Potato	endoplasmic reticulum	20.3	19.39
TraesCS6D01G083100.1	Wheat	cytosol	20.08	19.39
Bra027029.1-P	Field mustard	mitochondrion	9.94	19.34
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	20.51	19.28
VIT_14s0030g02260.t01	Wine grape	cytosol	17.97	19.19
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	20.3	19.01
Bra006187.1-P	Field mustard	plastid	11.63	18.9
TraesCS6D01G083400.1	Wheat	mitochondrion	19.66	18.86
KRH17148	Soybean	mitochondrion	21.56	18.72
HORVU6Hr1G017870.2	Barley	mitochondrion	11.84	18.67
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	19.87	18.61
TraesCS6B01G127500.1	Wheat	cytosol	19.24	18.57
KRH09154	Soybean	mitochondrion	21.78	18.53
KRH08636	Soybean	cytosol	20.3	18.39
VIT_14s0081g00120.t01	Wine grape	plastid	22.62	18.35
Bra021192.1-P	Field mustard	plastid	19.45	18.25
KRH39066	Soybean	cytosol	21.35	18.2
Bra036649.1-P	Field mustard	cytosol	15.01	18.16
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	20.08	18.1
KRH41817	Soybean	mitochondrion	21.14	18.02
TraesCS1B01G092600.1	Wheat	plastid	19.66	17.99
KRH48615	Soybean	mitochondrion	20.72	17.98
Bra031731.1-P	Field mustard	mitochondrion	19.24	17.91
KRH09084	Soybean	plastid	19.24	17.81
VIT_14s0081g00270.t01	Wine grape	plastid	21.78	17.76
TraesCS1B01G315500.1	Wheat	mitochondrion	12.05	17.76
AT1G63330.2	Thale cress	cytosol	20.72	17.53
AT5G16640.1	Thale cress	mitochondrion	18.6	17.46
KRH25652	Soybean	cytosol, golgi	19.87	17.41
KRH08639	Soybean	mitochondrion, plastid	20.72	17.35
KRH08277	Soybean	plastid	20.72	17.28
VIT_14s0081g00280.t01	Wine grape	mitochondrion	23.26	17.21
Bra025516.1-P	Field mustard	cytosol, mitochondrion	17.34	17.19
KRH08671	Soybean	cytosol, mitochondrion	20.08	17.18
KRH40400	Soybean	plastid	20.93	17.16
TraesCS1B01G072300.1	Wheat	plastid	20.51	17.08
Solyc06g007300.1.1	Tomato	extracellular	21.35	17.06
TraesCS1D01G068600.1	Wheat	plastid	12.26	17.06
Bra026882.1-P	Field mustard	cytosol	19.24	17.04
KRH08625	Soybean	plastid	20.72	17.01
PGSC0003DMT400008757	Potato	cytosol	17.76	16.87
KRH08628	Soybean	plastid	19.66	16.85
Bra027658.1-P	Field mustard	cytosol, mitochondrion	19.24	16.76
AT1G63070.1	Thale cress	mitochondrion	20.72	16.61
KRH31646	Soybean	cytosol	18.18	16.6
KRH08607	Soybean	cytosol	19.66	16.58
PGSC0003DMT400025074	Potato	cytosol	19.24	16.49
AT1G64580.1	Thale cress	mitochondrion	18.18	16.44
AT3G16710.1	Thale cress	mitochondrion	17.55	16.37
Solyc04g080120.1.1	Tomato	extracellular	21.14	16.34
PGSC0003DMT400056665	Potato	mitochondrion	20.3	16.3
Solyc06g007740.1.1	Tomato	cytosol	20.3	16.27
PGSC0003DMT400052971	Potato	mitochondrion	20.3	16.19
KRH09121	Soybean	mitochondrion	18.18	16.1
Bra026971.1-P	Field mustard	mitochondrion	21.35	16.06
AT1G63130.1	Thale cress	mitochondrion	21.35	16.03
PGSC0003DMT400056663	Potato	plastid	19.87	15.99
KRH39050	Soybean	mitochondrion	17.97	15.98
KRH09097	Soybean	plastid	19.45	15.78
PGSC0003DMT400053185	Potato	mitochondrion	19.66	15.76
AT5G41170.1	Thale cress	mitochondrion	17.55	15.75
PGSC0003DMT400015293	Potato	mitochondrion	20.3	15.74
PGSC0003DMT400015298	Potato	mitochondrion	20.3	15.74
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	14.38	15.7
Bra036651.1-P	Field mustard	mitochondrion	17.76	15.7
PGSC0003DMT400008760	Potato	mitochondrion	19.45	15.7
AT1G62680.2	Thale cress	plastid	17.97	15.51
AT3G22470.1	Thale cress	cytosol, mitochondrion	20.3	15.51
Os04t0349600-01	Rice	plastid	12.69	15.5
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	11.21	15.5
AT1G63080.3	Thale cress	mitochondrion	20.08	15.47
AT1G62590.1	Thale cress	mitochondrion	20.72	15.46
OQU88581	Sorghum	cytosol	35.52	15.46
AT1G64583.1	Thale cress	mitochondrion	16.7	15.43
AT1G62930.1	Thale cress	plastid	20.51	15.42
AT1G63150.1	Thale cress	mitochondrion	20.3	15.26
Bra016762.1-P	Field mustard	mitochondrion	19.45	15.16
VIT_14s0030g02280.t01	Wine grape	plastid	17.97	15.15
Bra026957.1-P	Field mustard	mitochondrion	19.24	15.09
AT1G62670.1	Thale cress	mitochondrion	20.08	15.08
KRH09095	Soybean	plastid	18.6	15.04
AT1G62910.1	Thale cress	mitochondrion	19.87	14.87
KRH08599	Soybean	cytosol, plastid	20.93	14.8
Bra026958.1-P	Field mustard	mitochondrion	19.87	14.76
Bra027026.1-P	Field mustard	mitochondrion	16.28	14.72
AT1G62720.1	Thale cress	mitochondrion	15.01	14.64
AT1G63400.1	Thale cress	cytosol, plastid	17.76	14.56
Bra028267.1-P	Field mustard	mitochondrion	19.24	14.54
Bra026836.1-P	Field mustard	cytosol, mitochondrion	15.01	14.46
AT1G12300.1	Thale cress	mitochondrion	19.45	14.44
AT1G06580.1	Thale cress	mitochondrion	15.22	14.4
OQU82832	Sorghum	cytosol	8.67	14.34
AT1G12620.1	Thale cress	cytosol, mitochondrion	18.82	14.33
TraesCS1D01G057800.1	Wheat	mitochondrion	10.99	14.33
AT1G12700.2	Thale cress	cytosol	18.6	14.24
Bra026954.1-P	Field mustard	mitochondrion	19.45	14.15
PGSC0003DMT400053182	Potato	cytosol	17.55	13.86
PGSC0003DMT400053556	Potato	mitochondrion	13.32	13.73
KRH09085	Soybean	mitochondrion	20.3	13.64
AT1G12775.1	Thale cress	cytosol, mitochondrion	18.39	13.51
Bra026401.1-P	Field mustard	plastid	15.01	13.27
AT1G62914.1	Thale cress	mitochondrion	14.8	13.26
Bra027726.1-P	Field mustard	mitochondrion	13.11	13.16
AT4G26800.2	Thale cress	mitochondrion, plastid	14.16	13.04
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	12.9	12.71
Bra027656.1-P	Field mustard	cytosol	25.16	12.65
AT1G64100.2	Thale cress	cytosol	21.35	12.53
TraesCS1A01G073800.1	Wheat	mitochondrion	8.67	12.31
KRH39064	Soybean	cytosol	23.68	11.56
KRH12873	Soybean	cytosol	15.64	10.63
Bra016758.1-P	Field mustard	plastid	20.51	8.37
TraesCS1A01G074000.1	Wheat	mitochondrion	2.96	4.95
TraesCS6B01G129100.1	Wheat	cytosol, plastid	1.27	2.08
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	0.85	1.75
TraesCS1A01G055500.1	Wheat	mitochondrion	0.42	0.92
TraesCS1A01G066600.1	Wheat	mitochondrion	0.42	0.76
TraesCS1D01G056600.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:KXG35774	EnsemblPlantsGene:SORBI_3002G227400	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF874
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	ProteinID:KXG35774	ProteinID:KXG35774.1
TIGRFAMs:TIGR00756	UniParc:UPI00081ABB7B	UniProt:A0A1B6QCY6	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr2:-:61930869..61933428

Molecular Weight (calculated)

52923.0 Da

IEP (calculated)

8.997

GRAVY (calculated)

0.016

Length

473 amino acids

Sequence
(BLAST)

001: MVQRGISPNL VTYNSVVHAL CKARAVDRAE AILRPMVGKG VRPDRMTYNN LIYVDSSMGQ WKEAVRVFKE MTSQGILPDV VTFNMLMASL CKHEKIKDAR
101: YVFDSMAIKG QKHRATIVFN EMREHGVEPN VVTYSTVIVV LCRVGKMNDA VEKFNQMIDQ GVAPDVCTYS CLIQGFCTLG ICPDIVFFSS IINNLCKVGR
201: VVEAQDIFDL TVSIGVHPNV MVYNTLMDGY CLVHKMKKAL KVFDAMVSVG IEPNVVTYST LVNGYCKIGR INEGLSLFTE MLHKGIEPSA ISYDIILRGL
301: FQAGRIVSAW TRLFKNNCSD KAILLFKELR AMNATIDIKT LSIMISGMFQ TRRVKEAKGL FASISGSGLV PSVVTYNVMM TNLIKEGLVE EADRMFSFME
401: NSGCDPNSRL LNHVVRELLE KREIVRAGTY LSKIDESKGL DEDSPTCRSK LSSSHRPNGT KNFMNFSRKK NVE

Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)

001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

Arabidopsis Description

RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.