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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG98502
KRG98507
KRH46360
KRH46364

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 KRG98502 AT4G26630.1 25387881
AT1G62670.1 KRG98507 AT4G26630.1 25387881
AT1G62670.1 KRH46360 AT4G26630.1 25387881
AT1G62670.1 KRH46364 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH70370 Soybean cytosol 83.68 87.68
KRH75063 Soybean mitochondrion, plastid 68.25 64.4
KRH75045 Soybean mitochondrion 66.32 63.32
KRH75048 Soybean mitochondrion 67.37 63.16
KRH58843 Soybean nucleus 56.14 52.37
KRH42744 Soybean mitochondrion 55.26 51.55
KRH38755 Soybean mitochondrion 53.68 51.52
KRH09256 Soybean mitochondrion 50.0 50.98
VIT_12s0028g02320.t01 Wine grape mitochondrion 39.3 46.96
VIT_14s0081g00270.t01 Wine grape plastid 44.04 43.28
VIT_14s0081g00120.t01 Wine grape plastid 44.04 43.05
VIT_14s0081g00110.t01 Wine grape cytosol 36.84 42.77
Bra027636.1-P Field mustard cytosol 24.04 42.28
KRH39054 Soybean cytosol 36.84 42.25
KRH39072 Soybean cytosol 36.67 42.14
KRH39074 Soybean cytosol 36.67 42.05
KRH39004 Soybean cytosol 36.49 41.85
KRH39057 Soybean cytosol 36.49 41.85
CDY03257 Canola cytosol 28.42 41.43
CDY51169 Canola cytosol 30.53 41.13
Bra036649.1-P Field mustard cytosol 27.89 40.66
CDY39810 Canola cytosol 27.89 40.66
CDX67634 Canola cytosol 29.82 40.19
CDY09968 Canola cytosol 20.7 40.14
KRH39112 Soybean cytosol 34.91 40.04
Solyc06g005220.2.1 Tomato cytosol 28.25 39.66
CDY06217 Canola cytosol 20.35 39.59
PGSC0003DMT400008759 Potato cytosol 22.11 39.5
CDY16110 Canola extracellular 28.07 39.02
PGSC0003DMT400052977 Potato cytosol 26.49 38.82
KRH40513 Soybean plastid 23.86 38.75
VIT_14s0030g02280.t01 Wine grape plastid 38.07 38.68
CDX71969 Canola cytosol 26.84 38.64
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 34.21 38.61
PGSC0003DMT400008757 Potato cytosol 33.68 38.55
Bra026882.1-P Field mustard cytosol 35.96 38.39
CDY16002 Canola cytosol 20.88 38.26
KRH08636 Soybean cytosol 34.74 37.93
CDY26589 Canola cytosol 4.56 37.68
CDY16031 Canola cytosol 20.53 37.62
CDY33797 Canola mitochondrion 33.68 37.5
KRH08607 Soybean cytosol 36.84 37.43
AT1G62720.1 Thale cress mitochondrion 31.75 37.32
Solyc06g007810.1.1 Tomato cytosol 17.54 37.31
KRH39066 Soybean cytosol 36.32 37.3
KRH08671 Soybean cytosol, mitochondrion 36.14 37.25
VIT_14s0081g00280.t01 Wine grape mitochondrion 41.75 37.25
KRH08628 Soybean plastid 35.96 37.14
Bra026884.1-P Field mustard cytosol 29.82 37.04
KRH09084 Soybean plastid 33.16 36.99
PGSC0003DMT400025074 Potato cytosol 35.79 36.96
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 34.04 36.95
PGSC0003DMT400025087 Potato endoplasmic reticulum 31.93 36.77
CDY46909 Canola mitochondrion 18.77 36.64
Bra027029.1-P Field mustard mitochondrion 15.61 36.63
KRH08277 Soybean plastid 36.32 36.51
AT1G63330.2 Thale cress cytosol 35.79 36.49
CDY65983 Canola mitochondrion 27.02 36.49
Bra026957.1-P Field mustard mitochondrion 38.6 36.48
Bra025516.1-P Field mustard cytosol, mitochondrion 30.53 36.48
Bra031731.1-P Field mustard mitochondrion 32.46 36.42
CDY00489 Canola mitochondrion 37.37 36.35
KRH41817 Soybean mitochondrion 35.26 36.22
CDY46394 Canola mitochondrion 30.53 36.17
CDY26588 Canola extracellular 20.53 36.11
PGSC0003DMT400008760 Potato mitochondrion 37.02 36.01
CDY48949 Canola mitochondrion 30.35 35.97
Bra028267.1-P Field mustard mitochondrion 39.47 35.94
Bra006187.1-P Field mustard plastid 18.25 35.74
KRH39050 Soybean mitochondrion 33.33 35.71
CDY25492 Canola mitochondrion 30.7 35.64
KRH08625 Soybean plastid 35.96 35.59
CDY08386 Canola cytosol 27.72 35.51
AT1G12300.1 Thale cress mitochondrion 39.65 35.48
Bra026958.1-P Field mustard mitochondrion 39.65 35.48
Bra026971.1-P Field mustard mitochondrion 39.12 35.45
CDY26607 Canola cytosol 28.42 35.45
KRH09154 Soybean mitochondrion 34.56 35.43
KRH48615 Soybean mitochondrion 33.86 35.41
KRH09121 Soybean mitochondrion 33.16 35.39
AT3G22470.1 Thale cress cytosol, mitochondrion 38.42 35.38
CDY16033 Canola cytosol 9.3 35.33
PGSC0003DMT400025067 Potato cytosol 29.47 35.29
AT1G12620.1 Thale cress cytosol, mitochondrion 38.42 35.27
Bra016762.1-P Field mustard mitochondrion 37.54 35.26
CDY68929 Canola mitochondrion 37.54 35.26
KRH08639 Soybean mitochondrion, plastid 34.91 35.22
KRH25652 Soybean cytosol, golgi 33.33 35.19
KRH17148 Soybean mitochondrion 33.51 35.05
KRH40400 Soybean plastid 35.44 35.01
PGSC0003DMT400056665 Potato mitochondrion 36.14 34.97
Bra021192.1-P Field mustard plastid 30.88 34.92
Solyc06g007280.2.1 Tomato cytosol 15.61 34.9
CDY34969 Canola mitochondrion 30.88 34.78
AT5G16640.1 Thale cress mitochondrion 30.7 34.72
PGSC0003DMT400052971 Potato mitochondrion 35.96 34.57
CDY34870 Canola mitochondrion 17.37 34.49
Solyc06g007300.1.1 Tomato extracellular 35.79 34.46
AT1G63080.3 Thale cress mitochondrion 37.02 34.36
CDX69436 Canola plastid 30.0 34.34
AT3G16710.1 Thale cress mitochondrion 30.53 34.32
CDY26593 Canola cytosol 36.67 34.32
PGSC0003DMT400056663 Potato plastid 35.26 34.18
CDY31272 Canola mitochondrion 34.04 34.15
AT1G12700.2 Thale cress cytosol 37.02 34.14
CDY26565 Canola mitochondrion 34.04 34.09
Bra027026.1-P Field mustard mitochondrion 31.23 34.03
CDY49646 Canola mitochondrion 29.82 33.93
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 32.63 33.88
AT5G41170.1 Thale cress mitochondrion 31.23 33.78
AT1G62680.2 Thale cress plastid 32.46 33.76
Bra036651.1-P Field mustard mitochondrion 31.4 33.46
CDY46912 Canola mitochondrion 28.95 33.4
AT1G63400.1 Thale cress cytosol, plastid 33.68 33.28
AT1G12775.1 Thale cress cytosol, mitochondrion 37.54 33.23
Bra026836.1-P Field mustard cytosol, mitochondrion 28.6 33.2
CDY34688 Canola cytosol 21.05 33.15
CDY31271 Canola mitochondrion 28.25 33.13
AT1G06580.1 Thale cress mitochondrion 28.95 33.0
AT1G62910.1 Thale cress mitochondrion 36.49 32.91
AT1G62930.1 Thale cress plastid 36.32 32.91
AT1G64580.1 Thale cress mitochondrion 30.18 32.89
CDY34375 Canola mitochondrion 29.82 32.88
KRH09082 Soybean cytosol 23.51 32.84
AT1G64583.1 Thale cress mitochondrion 29.47 32.81
AT1G62590.1 Thale cress mitochondrion 36.49 32.81
Bra026954.1-P Field mustard mitochondrion 37.37 32.77
PGSC0003DMT400053185 Potato mitochondrion 33.86 32.71
CDY33753 Canola mitochondrion 25.44 32.66
CDY35831 Canola mitochondrion 29.47 32.62
AT1G63150.1 Thale cress mitochondrion 35.96 32.59
CDY29251 Canola mitochondrion 28.95 32.54
Bra027658.1-P Field mustard cytosol, mitochondrion 30.88 32.41
PGSC0003DMT400015293 Potato mitochondrion 34.56 32.3
PGSC0003DMT400015298 Potato mitochondrion 34.56 32.3
AT1G63130.1 Thale cress mitochondrion 35.61 32.22
KRH31646 Soybean cytosol 29.12 32.05
Solyc06g007740.1.1 Tomato cytosol 33.16 32.03
Bra026401.1-P Field mustard plastid 30.0 31.96
CDX89301 Canola plastid 30.0 31.96
Solyc04g080120.1.1 Tomato extracellular 34.21 31.86
AT1G62670.1 Thale cress mitochondrion 35.09 31.75
KRH09095 Soybean plastid 32.46 31.62
KRH09097 Soybean plastid 32.28 31.56
AT1G63070.1 Thale cress mitochondrion 32.63 31.53
AT1G62914.1 Thale cress mitochondrion 29.12 31.44
CDY16032 Canola mitochondrion 22.46 31.37
PGSC0003DMT400053556 Potato mitochondrion 24.91 30.94
AT4G26800.2 Thale cress mitochondrion, plastid 27.54 30.54
CDY66358 Canola mitochondrion 20.88 30.51
VIT_14s0030g02260.t01 Wine grape cytosol 23.68 30.47
Bra027726.1-P Field mustard mitochondrion 25.09 30.36
PGSC0003DMT400053182 Potato cytosol 31.75 30.22
CDY47835 Canola mitochondrion 23.16 30.21
CDY28348 Canola mitochondrion, plastid 30.88 29.43
CDY25519 Canola mitochondrion, plastid 32.81 29.26
CDY16003 Canola cytosol, plastid 20.0 29.16
KRH08599 Soybean cytosol, plastid 34.04 29.0
CDY25522 Canola mitochondrion, plastid 22.11 28.19
CDX68680 Canola mitochondrion 21.58 26.62
KRH09085 Soybean mitochondrion 32.81 26.56
CDY66357 Canola cytosol 17.19 25.86
CDY15970 Canola cytosol 4.21 25.53
AT1G64100.2 Thale cress cytosol 34.39 24.32
CDX81633 Canola extracellular, golgi, plasma membrane 37.37 23.43
CDY34370 Canola cytosol 32.81 22.78
KRH39064 Soybean cytosol 37.54 22.08
Bra027656.1-P Field mustard cytosol 32.98 19.98
Bra016758.1-P Field mustard plastid 38.07 18.72
KRH12873 Soybean cytosol 22.11 18.1
CDY31277 Canola plastid 28.42 16.89
CDY34680 Canola cytosol 22.28 13.93
CDY21063 Canola plastid 0.53 0.55
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1UniProt:A0A0R0J900EMBL:ACUP02004586EnsemblPlantsGene:GLYMA_07G173300GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0004518GO:GO:0004519GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006139GO:GO:0008150
GO:GO:0008152GO:GO:0009451GO:GO:0009987GO:GO:0016787GO:GO:0043231GO:GO:0090305
InterPro:IPR002885InterPro:IPR011990EnsemblPlants:KRH49698ProteinID:KRH49698ProteinID:KRH49698.1PFAM:PF12854
PFAM:PF13041PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF1594InterPro:Pentatricopeptide_repeatTIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sfUniParc:UPI0006EDB665::::
Description
hypothetical protein
Coordinates
chr7:+:30472293..30477235
Molecular Weight (calculated)
63520.1 Da
IEP (calculated)
7.998
GRAVY (calculated)
0.131
Length
570 amino acids
Sequence
(BLAST)
001: MRDLKSEEAA LSFFHKMVVM NPLPREKDFT KLFGIIVKMK HYATTISLIK HIYSLGIKPD VYTLTIIINC LCHLNHTVFG FSVLGVMFKI GVDPTVVTFA
101: TLINGLCAEG NVARAARFAD SLEDMGHQSN SYTYGAIING LCKAGDTSGA ILYLEKIKGR NCDLDVVIAY STIMDSLCKD GMVCEALNLF SGMTSKGIQP
201: DLVAYNSLIH GLCNFGRWKE ATTLLGNMMR KGIMPNVQTF NVLVDNFCKD GMISRAKTIM GFMVHVGVEP DVVTYNSVIS GHCLLSQMGD AVKVFELMIH
301: KGFLPNLVTY SSLIHGWCKT KNINKALFLL GEMVNSGLNP DVVTWSTLIG GFCKAGKPEA AKELFCTMHE HDQHPNLQTC AIILDGLFKC QFHSEAISLF
401: REMEKMNLEL NVVIYNIVLD GMCSFGKLND AQELFSCLPS KGIKIDVVAY TTMIKGLCKE GLLDDAENLL MKMEENGCLP NEFTYNVFVR GLLQRYDISR
501: STKYLLLMKG KGLSADATTT ELLISYFSAN KENSALHSIN HHQNCIFALC FRKSLHKFHR HARPNLCRNR
Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)
001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.