Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0758000-01 | |
| Os06t0219500-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G50680.1 | Os02t0758000-01 | AT4G25200.1 | 21798944 |
| AT5G50680.1 | Os06t0219500-00 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G352700.2 | Wheat | cytosol | 84.15 | 83.89 |
| TraesCS7D01G370300.1 | Wheat | cytosol | 84.15 | 83.13 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 84.15 | 83.13 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 83.84 | 82.83 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 83.23 | 82.23 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 82.32 | 81.08 |
| EES08513 | Sorghum | cytosol | 82.62 | 80.9 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 78.66 | 77.95 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 19.82 | 72.22 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 82.93 | 71.02 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.77 | 67.8 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 61.89 | 62.85 |
| PGSC0003DMT400069346 | Potato | cytosol | 61.28 | 62.81 |
| Solyc06g072080.2.1 | Tomato | cytosol | 59.45 | 61.32 |
| PGSC0003DMT400039493 | Potato | cytosol | 60.37 | 61.3 |
| KRH59806 | Soybean | cytosol, nucleus | 61.28 | 60.73 |
| CDX92842 | Canola | cytosol | 59.15 | 60.25 |
| CDX93356 | Canola | cytosol | 59.15 | 60.25 |
| KRH41120 | Soybean | nucleus | 51.22 | 59.79 |
| Bra013848.1-P | Field mustard | cytosol | 58.54 | 59.63 |
| CDY34327 | Canola | cytosol | 58.54 | 59.63 |
| AT4G24940.1 | Thale cress | cytosol | 58.23 | 59.32 |
| AT5G50580.2 | Thale cress | cytosol | 57.62 | 59.06 |
| AT5G50680.1 | Thale cress | cytosol | 57.62 | 59.06 |
| CDY03404 | Canola | cytosol | 57.93 | 59.01 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 82.93 | 58.37 |
| CDY08955 | Canola | cytosol | 18.6 | 57.55 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 60.67 | 57.51 |
| CDY08954 | Canola | cytosol, mitochondrion | 29.88 | 56.0 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 41.16 | 53.36 |
| Bra003552.1-P | Field mustard | cytosol | 18.9 | 40.0 |
| CDY48184 | Canola | cytosol | 18.9 | 38.99 |
| CDY08961 | Canola | plastid | 16.16 | 37.59 |
| CDY67953 | Canola | cytosol | 21.95 | 34.62 |
| Bra023205.1-P | Field mustard | cytosol | 22.26 | 33.95 |
| CDY68016 | Canola | cytosol | 18.9 | 28.18 |
| CDY31910 | Canola | nucleus | 23.48 | 27.7 |
| Os03t0820100-01 | Rice | cytosol | 24.7 | 15.25 |
Protein Annotations
| MapMan:19.2.2.2.2.1 | Gene3D:3.40.50.720 | EntrezGene:4350554 | ProteinID:ABA93776.1 | EMBL:AK111924 | ProteinID:BAF28300.1 |
| ProteinID:BAT14120.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008641 | GO:GO:0009987 |
| GO:GO:0016925 | GO:GO:0019538 | GO:GO:0019948 | EnsemblPlantsGene:Os11g0497000 | EnsemblPlants:Os11t0497000-01 | PFAM:PF00899 |
| PRINTS:PR01849 | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF162 | UniProt:Q2R3X8 | SUPFAM:SSF69572 | InterPro:ThiF_NAD_FAD-bd |
| InterPro:UBQ/SUMO-activ_enz_E1-like | UniParc:UPI0000682224 | InterPro:Ubiquitin-activating_enz | RefSeq:XP_015618029.1 | SEG:seg | : |
Description
Similar to Ubiquitin activating enzyme-like protein (SUMO activating enzyme 1a). (Os11t0497000-01)
Coordinates
chr11:+:17670502..17676701
Molecular Weight (calculated)
35933.1 Da
IEP (calculated)
5.293
GRAVY (calculated)
-0.224
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGGGAEEE LTAQETALYD RQIRVWGVDA QKRLSKAHVL VCGMNGTTTE FCKNIVLAGV GSLSLMDDHL VTEDDLNANF LIPHDESIYG GRSRAEVCCE
101: SLKDFNPMVR VAVEKGDPSL IDGEFLDKFD IIVVSCAPIK TKLLINDNCR KRSKHIAFYA IECKDSCGEI FVDLQNHSYV QKVGGEPKPK ELAYPSLQEA
201: ISVPWKNLPR KTTKLYFAMR VLENYESSEG RNACEASLSD RPAVLALRKD MCDKMSLSES QIPTALLERL LAAGKKQHPP VCAILGGILG QEVIKSISGK
301: GDPIKNFFYY DAADGKGIAE DIPPLSSD
101: SLKDFNPMVR VAVEKGDPSL IDGEFLDKFD IIVVSCAPIK TKLLINDNCR KRSKHIAFYA IECKDSCGEI FVDLQNHSYV QKVGGEPKPK ELAYPSLQEA
201: ISVPWKNLPR KTTKLYFAMR VLENYESSEG RNACEASLSD RPAVLALRKD MCDKMSLSES QIPTALLERL LAAGKKQHPP VCAILGGILG QEVIKSISGK
301: GDPIKNFFYY DAADGKGIAE DIPPLSSD
001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
Arabidopsis Description
SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.