Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc08g078700.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G50680.1 | Solyc08g078700.2.1 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069346 | Potato | cytosol | 93.71 | 93.12 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 80.82 | 74.28 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 72.33 | 71.21 |
| KRH41120 | Soybean | nucleus | 60.69 | 68.68 |
| KRH59806 | Soybean | cytosol, nucleus | 71.07 | 68.28 |
| GSMUA_AchrUn_... | Banana | cytosol | 67.3 | 66.25 |
| CDY08955 | Canola | cytosol | 21.7 | 65.09 |
| AT5G50680.1 | Thale cress | cytosol | 65.09 | 64.69 |
| AT5G50580.2 | Thale cress | cytosol | 65.09 | 64.69 |
| CDX92842 | Canola | cytosol | 65.09 | 64.29 |
| CDX93356 | Canola | cytosol | 65.09 | 64.29 |
| Bra013848.1-P | Field mustard | cytosol | 65.09 | 64.29 |
| CDY34327 | Canola | cytosol | 65.09 | 64.29 |
| CDY03404 | Canola | cytosol | 64.78 | 63.98 |
| AT4G24940.1 | Thale cress | cytosol | 63.84 | 63.04 |
| TraesCS7A01G352700.2 | Wheat | cytosol | 61.64 | 59.57 |
| Os11t0497000-01 | Rice | cytosol | 61.32 | 59.45 |
| EES08513 | Sorghum | cytosol | 61.64 | 58.51 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 61.01 | 58.43 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 60.69 | 58.13 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 60.69 | 58.13 |
| TraesCS7D01G370300.1 | Wheat | cytosol | 60.69 | 58.13 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 60.69 | 57.96 |
| CDY08954 | Canola | cytosol, mitochondrion | 30.5 | 55.43 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 55.97 | 53.78 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 60.06 | 49.87 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 13.84 | 48.89 |
| CDY08961 | Canola | plastid | 19.18 | 43.26 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 61.01 | 41.63 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 31.76 | 39.92 |
| Solyc12g005870.1.1 | Tomato | cytosol | 23.58 | 15.0 |
| Solyc11g072460.1.1 | Tomato | cytosol | 24.53 | 14.53 |
Protein Annotations
| MapMan:19.2.2.2.2.1 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008641 |
| GO:GO:0009987 | GO:GO:0016925 | GO:GO:0019538 | GO:GO:0019948 | UniProt:K4C8T0 | PFAM:PF00899 |
| PANTHER:PTHR10953 | PANTHER:PTHR10953:SF162 | SUPFAM:SSF69572 | EnsemblPlantsGene:Solyc06g072080.2 | EnsemblPlants:Solyc06g072080.2.1 | InterPro:ThiF_NAD_FAD-bd |
| UniParc:UPI0002765584 | InterPro:Ubiquitin-activating_enz | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:44423409..44427888
Molecular Weight (calculated)
35498.0 Da
IEP (calculated)
5.043
GRAVY (calculated)
-0.064
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKVGEELTE QETAIYDRQI RVWGVDAQRR LSKSHIFVSG LKGTVIEFCK NIVLAGVGSL TLNDDRLVTE ELLSANFLVP SDENVTSGKS LAELCCESLK
101: DFNPMVTVSV EKGVLANFDV EFFQKFDAVV ISCCSLLTKK SVNAKCRKLP RRVAFYSVEC RDSCGEIFVD LQSYSKKKNE ETIECQLQYP SFEEAIAVPW
201: RSLPKRMSKL YFAMRVLERF EVLEKQNPQD TSGDDLPNVL KLRKELCEAQ CINESQIPVP LLQRLLAARV EFPSVCAIIG GVLGQEVIKA ISGKGDPLKN
301: FFLFDAMDGK GIIEDISG
101: DFNPMVTVSV EKGVLANFDV EFFQKFDAVV ISCCSLLTKK SVNAKCRKLP RRVAFYSVEC RDSCGEIFVD LQSYSKKKNE ETIECQLQYP SFEEAIAVPW
201: RSLPKRMSKL YFAMRVLERF EVLEKQNPQD TSGDDLPNVL KLRKELCEAQ CINESQIPVP LLQRLLAARV EFPSVCAIIG GVLGQEVIKA ISGKGDPLKN
301: FFLFDAMDGK GIIEDISG
001: MDGDELTEQE TALYDRQIRV WGAGAQRRLS KSHVLVSGIK GTVAEFCKNI VLAGVGSVTL LDDRLVTTEV FNANFLILPD ENAYVGKTVA EICCDSLKDF
101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKKKLD ETVECELTFP SFEEAVSVPW
201: KPMPRRTAKL YFAMRVIELF EETEGRKPGE CSLSDLPRVL KLKKELCEGN SVSENHIPDI LLERLVSNNT EFPPACAIIG GILGQEVIKV ISGKGEPLKN
301: FFYFDAEDGK GVIEDLSHKL
101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKKKLD ETVECELTFP SFEEAVSVPW
201: KPMPRRTAKL YFAMRVIELF EETEGRKPGE CSLSDLPRVL KLKKELCEGN SVSENHIPDI LLERLVSNNT EFPPACAIIG GILGQEVIKV ISGKGEPLKN
301: FFYFDAEDGK GVIEDLSHKL
Arabidopsis Description
SAE1B-2SUMO-activating enzyme subunit 1B-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DI12]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.