Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P13370_001 | Banana | nucleus | 69.39 | 76.19 |
| GSMUA_Achr7P05170_001 | Banana | nucleus | 74.49 | 74.3 |
| GSMUA_Achr1P26000_001 | Banana | nucleus | 66.84 | 71.0 |
| GSMUA_Achr4P20400_001 | Banana | nucleus | 68.88 | 70.31 |
| KRH03552 | Soybean | nucleus | 60.2 | 68.41 |
| KRH20116 | Soybean | nucleus | 59.95 | 67.92 |
| GSMUA_Achr5P04420_001 | Banana | nucleus | 42.09 | 65.74 |
| KRH37876 | Soybean | nucleus | 61.73 | 65.58 |
| KRH12889 | Soybean | nucleus | 61.73 | 65.41 |
| Solyc12g010410.1.1 | Tomato | nucleus | 54.59 | 65.05 |
| PGSC0003DMT400020407 | Potato | nucleus | 54.34 | 62.65 |
| VIT_11s0118g00800.t01 | Wine grape | nucleus | 67.35 | 61.4 |
| PGSC0003DMT400078990 | Potato | nucleus | 64.54 | 60.96 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 45.15 | 60.82 |
| Solyc07g007120.2.1 | Tomato | nucleus | 65.05 | 59.16 |
| GSMUA_Achr8P10550_001 | Banana | nucleus | 24.74 | 31.6 |
| GSMUA_Achr5P01960_001 | Banana | nucleus | 15.05 | 30.73 |
| GSMUA_Achr11P... | Banana | nucleus | 23.98 | 30.52 |
| GSMUA_Achr2P00410_001 | Banana | nucleus | 23.72 | 30.49 |
| GSMUA_Achr4P28270_001 | Banana | nucleus | 20.66 | 29.89 |
| GSMUA_Achr7P08050_001 | Banana | nucleus | 20.15 | 29.7 |
| GSMUA_Achr10P... | Banana | nucleus | 19.13 | 28.85 |
| GSMUA_Achr7P27540_001 | Banana | nucleus | 23.72 | 26.57 |
| GSMUA_Achr4P03120_001 | Banana | nucleus | 19.64 | 26.55 |
| GSMUA_Achr2P13200_001 | Banana | nucleus | 23.72 | 26.5 |
| GSMUA_Achr4P32230_001 | Banana | nucleus | 22.96 | 26.09 |
| GSMUA_Achr3P26230_001 | Banana | nucleus | 21.17 | 25.78 |
| GSMUA_Achr6P04640_001 | Banana | nucleus | 22.96 | 25.21 |
| GSMUA_Achr4P14600_001 | Banana | nucleus | 23.21 | 23.45 |
| GSMUA_Achr8P05110_001 | Banana | nucleus | 16.84 | 21.36 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G06000_001 |
| EnsemblPlants:GSMUA_Achr10P06000_001 | EnsemblPlants:GSMUA_Achr10T06000_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | UniProt:M0RFS7 | PFAM:PF03789 | PFAM:PF03790 |
| PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF122 |
| SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI000294A1E7 |
| SEG:seg | : | : | : | : | : |
Description
homeobox protein knotted-1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G06000_001]
Coordinates
chr10:-:16485103..16491601
Molecular Weight (calculated)
43055.6 Da
IEP (calculated)
6.244
GRAVY (calculated)
-0.628
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFRGRIPRE LTLPQYAEQH LTDDHAVIGS VDPLSGPAEP SVEPQHAPLV SAGGSDGIGP AWLGGAALRP QGPRGSFLHL QTASDSSASP GGRGGGGQWL
101: PRLPGSGDGE AAEVGEGTWR SARYKAEILA HPLYEQLLSA HVACLRIATP VDQLPRIDTQ LAQTQHIVSK YSALGAQMLA DDKELDQFMT QYVLLLRSFK
201: EQLQQHVRVH AMEAVMACWE LEQSLQSLTG VSPGEGTGAT MSDDDDDQAD SETNLFDGCL DGSDGMGFGP LFLTESEKTL MERVRQELKH ELKQGYKEKI
301: VDIREEILRK RRAGKLPGDT TSTLKAWWQS HSKWPYPTED DKARLVQETG LQLKQINNWF INQRKRNWHS NPSSSSSTKS KRKSNAGDKG QL
101: PRLPGSGDGE AAEVGEGTWR SARYKAEILA HPLYEQLLSA HVACLRIATP VDQLPRIDTQ LAQTQHIVSK YSALGAQMLA DDKELDQFMT QYVLLLRSFK
201: EQLQQHVRVH AMEAVMACWE LEQSLQSLTG VSPGEGTGAT MSDDDDDQAD SETNLFDGCL DGSDGMGFGP LFLTESEKTL MERVRQELKH ELKQGYKEKI
301: VDIREEILRK RRAGKLPGDT TSTLKAWWQS HSKWPYPTED DKARLVQETG LQLKQINNWF INQRKRNWHS NPSSSSSTKS KRKSNAGDKG QL
001: MAFHHNHLSQ DLSFNHFTDQ HQPPPPQPPP PPPQQQQHFQ EAPPPNWLNT ALLRSSDNNN NFLNLHTATA NTTTASSSDS PSSAAAAAAA NQWLSRSSSF
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKSN AGDNSGRERF A
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKSN AGDNSGRERF A
Arabidopsis Description
KNAT3KNAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178U9D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.