CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20752	Sorghum	cytosol, nucleus	75.54	59.32
EES02214	Sorghum	mitochondrion, nucleus	89.93	33.07
Os01t0226700-01	Rice	mitochondrion, nucleus	53.96	30.0
GSMUA_Achr11P...	Banana	nucleus	32.37	28.66
Zm00001d039313_P001	Maize	mitochondrion	69.06	25.46
TraesCS3D01G159700.1	Wheat	mitochondrion, nucleus	61.15	24.22
TraesCS3A01G151800.1	Wheat	nucleus, plastid	61.15	24.08
HORVU3Hr1G030870.1	Barley	nucleus	61.15	23.74
TraesCS3B01G178800.1	Wheat	nucleus	59.71	23.45
GSMUA_Achr2P19920_001	Banana	nucleus	30.22	21.88
EES17897	Sorghum	nucleus, plastid	46.76	21.52
GSMUA_Achr8P15960_001	Banana	nucleus	33.81	13.24
EES03931	Sorghum	plastid	20.86	12.29
EES18304	Sorghum	nucleus, plastid	18.7	11.35
EES03313	Sorghum	nucleus	33.81	11.33
EER94592	Sorghum	mitochondrion	20.86	10.28
EER92948	Sorghum	plastid	18.7	10.2
OQU78505	Sorghum	nucleus	25.18	9.72
CDY44933	Canola	mitochondrion	14.39	9.71
Bra020055.1-P	Field mustard	mitochondrion	14.39	9.71
AT5G19650.1	Thale cress	mitochondrion, nucleus	15.11	9.5
KRH60283	Soybean	mitochondrion, nucleus	19.42	9.47
Bra002252.1-P	Field mustard	mitochondrion	14.39	9.39
CDY58970	Canola	mitochondrion	14.39	9.35
CDX92512	Canola	mitochondrion	14.39	9.35
KRH41574	Soybean	mitochondrion, nucleus	19.42	9.22
CDY42284	Canola	mitochondrion	13.67	9.18
OQU85631	Sorghum	plastid	19.42	8.77
PGSC0003DMT400000838	Potato	nucleus	17.27	8.57
EES17993	Sorghum	nucleus, plastid	15.11	8.5
EER92692	Sorghum	mitochondrion	17.99	8.01
OQU90474	Sorghum	mitochondrion	15.11	7.58
EES11304	Sorghum	plastid	19.42	6.6
EES19813	Sorghum	nucleus	15.83	6.57
EES01480	Sorghum	nucleus	16.55	6.5
OQU92638	Sorghum	mitochondrion	12.95	6.12
EES18387	Sorghum	mitochondrion	16.55	6.1
KXG33624	Sorghum	nucleus	15.83	4.05

Protein Annotations

EnsemblPlants:KXG33158	EnsemblPlantsGene:SORBI_3003G262000	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF69	PFAM:PF04844	ProteinID:KXG33158	ProteinID:KXG33158.1	SEG:seg	UniParc:UPI00081AD5CE
UniProt:A0A1B6Q5F4	MapMan:15.5.37	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:59985997..59986469

Molecular Weight (calculated)

15380.8 Da

IEP (calculated)

11.718

GRAVY (calculated)

-0.601

Length

139 amino acids

Sequence
(BLAST)

001: MAGELPPRRE FYTKKQKKQT TTAKMKPPAA STGKPPKPPR MTMTTGKRGQ VHPAVTARRP HRRAVSSCDT CGVRDGFRPV VSAAEEQVRK GFAVIVGRQL
101: FGPPDMERLL RSYLSLNAPR HHPVILQAFS DSWVVVHGG

Best Arabidopsis Sequence Match ( AT2G18500.1 )
(BLAST)

001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC

Arabidopsis Description

OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.