CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33158	Sorghum	cytosol, plastid	59.32	75.54
GSMUA_Achr11P...	Banana	nucleus	38.42	43.31
EES02214	Sorghum	mitochondrion, nucleus	88.7	41.53
GSMUA_Achr2P19920_001	Banana	nucleus	37.85	34.9
Os01t0226700-01	Rice	mitochondrion, nucleus	46.33	32.8
Zm00001d039313_P001	Maize	mitochondrion	68.36	32.1
TraesCS3D01G159700.1	Wheat	mitochondrion, nucleus	58.19	29.34
TraesCS3A01G151800.1	Wheat	nucleus, plastid	58.19	29.18
EES17897	Sorghum	nucleus, plastid	49.15	28.81
HORVU3Hr1G030870.1	Barley	nucleus	58.19	28.77
TraesCS3B01G178800.1	Wheat	nucleus	56.5	28.25
GSMUA_Achr8P15960_001	Banana	nucleus	40.11	20.0
Bra020055.1-P	Field mustard	mitochondrion	22.6	19.42
CDY44933	Canola	mitochondrion	22.6	19.42
Bra002252.1-P	Field mustard	mitochondrion	23.16	19.25
CDX92512	Canola	mitochondrion	23.16	19.16
CDY58970	Canola	mitochondrion	23.16	19.16
AT5G19650.1	Thale cress	mitochondrion, nucleus	23.73	19.0
CDY42284	Canola	mitochondrion	22.03	18.84
EES18304	Sorghum	nucleus, plastid	22.6	17.47
EES03931	Sorghum	plastid	23.16	17.37
KRH60283	Soybean	mitochondrion, nucleus	27.68	17.19
EES03313	Sorghum	nucleus	39.55	16.87
KRH41574	Soybean	mitochondrion, nucleus	27.68	16.72
OQU78505	Sorghum	nucleus	33.9	16.67
PGSC0003DMT400000838	Potato	nucleus	23.73	15.0
EER92948	Sorghum	plastid	21.47	14.9
EER94592	Sorghum	mitochondrion	23.73	14.89
EER92692	Sorghum	mitochondrion	24.29	13.78
EES17993	Sorghum	nucleus, plastid	18.64	13.36
OQU85631	Sorghum	plastid	23.16	13.31
OQU90474	Sorghum	mitochondrion	16.95	10.83
EES19813	Sorghum	nucleus	19.21	10.15
EES11304	Sorghum	plastid	23.16	10.02
EES01480	Sorghum	nucleus	18.64	9.32
EES18387	Sorghum	mitochondrion	19.77	9.28
OQU92638	Sorghum	mitochondrion	14.69	8.84
KXG33624	Sorghum	nucleus	19.21	6.26

Protein Annotations

EnsemblPlants:KXG20752	EnsemblPlantsGene:SORBI_3010G247900	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF69	PFAM:PF04844	PFscan:PS51754	ProteinID:KXG20752	ProteinID:KXG20752.1	SEG:seg
TIGRFAMs:TIGR01568	UniParc:UPI0007F1F739	UniProt:A0A194YLC9	MapMan:15.5.37	:	:

Description

hypothetical protein

Coordinates

chr10:-:58796217..58796773

Molecular Weight (calculated)

19633.3 Da

IEP (calculated)

11.210

GRAVY (calculated)

-0.733

Length

177 amino acids

Sequence
(BLAST)

001: DAEDDLAGRA GCISKRLPGE SAETFFSSPR SFSSDSSEFY AKKQKKQTTT TKTKPHAAST GKPPEPPRTT MTTGKGARRH HRRARASTTR VRVRDGFGPV
101: VSAAEEQVRR GFAVVKRSRD PYADSRSSMV EMIVGRQLFG PPDMEHLLRS YLSLNTPRHH PVILRAFSDI WVVVHGG

Best Arabidopsis Sequence Match ( AT5G19650.1 )
(BLAST)

001: MEKRMKLRVS RIVRSSLSSC RPRDLYDVVE TCAVTSKATS SERFFVTKAK TKTPSRPKSH ASSCPRASPI FPPNPFYEES RSFRDLRKKV KTNRKQRSQF
101: GSDPLFASRF KSTGSWYWSC SEEEDEGDKE ESEDDDSDTL FSSRSFSSDS SKAESFAVVK KSKDPYEDFR TSMVEMIVER QIFAPAELQQ LLQCFLSLNS
201: RQHHKVIVQV FLEIYATLFS P

Arabidopsis Description

OFP8Transcription repressor OFP8 [Source:UniProtKB/Swiss-Prot;Acc:Q3E9B4]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.