Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G310200.1 | Wheat | mitochondrion, plastid | 85.53 | 91.04 |
| TraesCS1D01G299500.1 | Wheat | nucleus | 88.42 | 90.32 |
| HORVU1Hr1G069900.1 | Barley | endoplasmic reticulum, mitochondrion, nucleus, plastid | 78.95 | 71.26 |
| Zm00001d038473_P001 | Maize | mitochondrion | 41.05 | 42.62 |
| EES18387 | Sorghum | mitochondrion | 42.11 | 42.44 |
| TraesCS3A01G345100.1 | Wheat | nucleus | 38.68 | 40.61 |
| Os05t0477200-01 | Rice | nucleus | 42.89 | 38.53 |
| TraesCS2A01G392200.1 | Wheat | mitochondrion | 19.21 | 28.4 |
| TraesCS4A01G136100.1 | Wheat | mitochondrion | 17.11 | 23.38 |
| TraesCS2A01G106000.1 | Wheat | nucleus | 17.11 | 23.3 |
| TraesCS3A01G289400.1 | Wheat | nucleus | 17.11 | 21.96 |
| TraesCS1A01G185400.1 | Wheat | mitochondrion | 13.16 | 20.33 |
| TraesCS3A01G376000.1 | Wheat | plastid | 11.84 | 20.09 |
| TraesCS1A01G275500.1 | Wheat | nucleus, plastid | 11.58 | 19.21 |
| TraesCS1A01G338100.1 | Wheat | cytosol | 17.11 | 18.95 |
| TraesCS4A01G041100.1 | Wheat | mitochondrion | 12.63 | 17.08 |
| TraesCS5A01G492400.1 | Wheat | nucleus | 10.0 | 16.31 |
| TraesCS3A01G228900.1 | Wheat | nucleus | 13.95 | 15.96 |
| TraesCS3A01G151800.1 | Wheat | nucleus, plastid | 14.21 | 15.3 |
| TraesCS6A01G258000.1 | Wheat | plastid | 11.58 | 15.07 |
| TraesCS2A01G396600.1 | Wheat | mitochondrion, plastid | 14.21 | 14.25 |
Protein Annotations
| MapMan:15.5.37 | InterPro:DNA_bnd_dom_ovate | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 |
| InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFAM:PF13724 | PFscan:PS51754 |
| PANTHER:PTHR33057 | PANTHER:PTHR33057:SF22 | TIGRFAMs:TIGR01568 | EnsemblPlantsGene:TraesCS1A01G300100 | EnsemblPlants:TraesCS1A01G300100.1 | SEG:seg |
Description
No Description!
Coordinates
chr1A:+:495129469..495130793
Molecular Weight (calculated)
41870.2 Da
IEP (calculated)
11.017
GRAVY (calculated)
-0.912
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRKFRLSD MIPNAWFYKL RDMGAHGRGG VGVHHRSSSA RSYQQPPSAR ESSARWSVEA ARQPPSSRWH REVSNDVQQP EADVEPPATP TKESPRAPLP
101: RRASYYYSTR DREVPAPPVP KPPRAKEAQS PTRSARRRHK VDHAPEERGP AGGKEPVVGA LGSSGRRRDT CIKSDGGEPR RPTVSGPADD GRNVKVIASR
201: NEIIIDLLGE DTPGRRLRPI VTKPAARRQP GPNKQDVTQA DHADATARAS SASDKSSVSR PRRSSASSSG RRRLKTLSKS PRLAATARKA NPPSRKWAAP
301: PPPLPAPVIV SSYPVVKMSE DPRQDFRESM EEMISAKRIQ DAEDLEDLLA CYLSLNDAAH HDLIIDVFEQ IWVSLAGARP
101: RRASYYYSTR DREVPAPPVP KPPRAKEAQS PTRSARRRHK VDHAPEERGP AGGKEPVVGA LGSSGRRRDT CIKSDGGEPR RPTVSGPADD GRNVKVIASR
201: NEIIIDLLGE DTPGRRLRPI VTKPAARRQP GPNKQDVTQA DHADATARAS SASDKSSVSR PRRSSASSSG RRRLKTLSKS PRLAATARKA NPPSRKWAAP
301: PPPLPAPVIV SSYPVVKMSE DPRQDFRESM EEMISAKRIQ DAEDLEDLLA CYLSLNDAAH HDLIIDVFEQ IWVSLAGARP
001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
Arabidopsis Description
OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.