Factsheet for GSMUA_Achr5P02120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr3P25020_001
GSMUA_Achr8P05800_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45110.1	GSMUA_Achr10P...	AT5G06960.1	21798944
AT5G45110.1	GSMUA_Achr11P...	AT5G06960.1	21798944
AT5G45110.1	GSMUA_Achr3P25020_001	AT5G06960.1	21798944
AT5G45110.1	GSMUA_Achr8P05800_001	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	87.67	86.05
VIT_10s0042g01250.t01	Wine grape	cytosol, plastid	66.1	65.76
EES01524	Sorghum	plastid	69.35	65.22
Zm00001d012660_P002	Maize	cytosol	69.35	65.22
KRH36735	Soybean	cytosol, plastid	63.7	63.05
Os01t0767900-01	Rice	plastid	67.98	62.52
TraesCS3D01G302900.1	Wheat	cytosol, plastid	64.9	62.44
TraesCS3B01G337700.1	Wheat	plastid	64.9	62.23
KRH11740	Soybean	plastid	62.67	62.03
TraesCS3A01G298800.1	Wheat	plastid	65.24	61.65
HORVU3Hr1G074640.4	Barley	cytosol, plastid	64.9	61.43
PGSC0003DMT400054660	Potato	cytosol, plastid	60.79	61.1
Solyc02g069310.2.1	Tomato	cytosol, plastid	60.79	61.1
KRH73603	Soybean	cytosol, plastid	58.05	57.46
KRH14520	Soybean	cytosol, plastid	57.36	56.78
CDX82577	Canola	plastid	51.88	55.9
CDY26398	Canola	plastid	53.42	55.52
Solyc07g044980.2.1	Tomato	nucleus	54.45	55.5
Bra025093.1-P	Field mustard	plastid	51.88	55.49
CDY39410	Canola	plastid	51.88	55.49
Bra021949.1-P	Field mustard	plastid	53.25	55.34
PGSC0003DMT400002412	Potato	cytosol	54.45	55.3
AT5G45110.1	Thale cress	cytosol, plastid	54.11	53.92
CDX99350	Canola	plastid	54.28	53.91
CDX78955	Canola	plastid	54.11	53.74
Os03t0667100-01	Rice	cytosol	53.94	53.48
Bra013416.1-P	Field mustard	plastid	53.77	53.4
Zm00001d034944_P004	Maize	cytosol	41.44	53.19
AT4G19660.2	Thale cress	cytosol, plastid	54.11	52.58
Zm00001d013581_P001	Maize	cytosol	17.81	51.74
EER91108	Sorghum	plastid	52.4	51.17
TraesCS4D01G017500.1	Wheat	cytosol	51.88	50.84
TraesCS4A01G294400.1	Wheat	cytosol, plastid	52.05	50.58
TraesCS4B01G018900.2	Wheat	cytosol, plastid	51.88	50.42
HORVU4Hr1G003040.1	Barley	cytosol, plastid	50.68	50.25
GSMUA_Achr2P16670_001	Banana	cytosol	44.35	44.35
GSMUA_Achr7P09190_001	Banana	cytosol	43.66	44.35
CDY36698	Canola	cytosol	38.01	43.61
GSMUA_Achr6P00950_001	Banana	nucleus	46.4	43.02
GSMUA_Achr8P05490_001	Banana	cytosol	39.55	39.76
GSMUA_Achr3P25880_001	Banana	cytosol	38.18	39.26
GSMUA_AchrUn_...	Banana	cytosol	36.99	37.57
GSMUA_Achr5P16220_001	Banana	cytosol	22.6	29.93
GSMUA_Achr11P...	Banana	cytosol	21.75	29.4
GSMUA_Achr8P22070_001	Banana	cytosol	20.38	28.67
GSMUA_Achr3P08710_001	Banana	cytosol	20.89	28.64
GSMUA_Achr5P08160_001	Banana	cytosol	20.89	28.57
GSMUA_AchrUn_...	Banana	cytosol	20.38	28.4
GSMUA_AchrUn_...	Banana	cytosol	20.21	26.34

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr5G02120_001	EnsemblPlants:GSMUA_Achr5P02120_001
EnsemblPlants:GSMUA_Achr5T02120_001	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0SUZ1
InterPro:NPR1/NIM1-like_C	PFAM:PF00651	PFAM:PF12313	PFAM:PF12796	PFscan:PS50088	PFscan:PS50097
PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI000295D266	SEG:seg	:	:

Description

Putative Regulatory protein NPR1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G02120_001]

Coordinates

chr5:+:1357651..1363188

Molecular Weight (calculated)

64913.7 Da

IEP (calculated)

6.930

GRAVY (calculated)

-0.275

Length

584 amino acids

Sequence
(BLAST)

001: MPNATEPSST ISFASSSYLS NCSSAYHAPV AAPNPPVQHA APDGGTNLEV LSLSKLSSNL ERLLVDTEFD CTDAEIMVEG APVGVHRCIL AARSRFFREL
101: FSREGSGGAP REGKPRFDMD ELVPGGRVGR EAFMVFLSYL YTGKLKPAPQ DVSICVDRFC AHDSCPPAIG FAVELMYASS VFQIAELVSL LQRRLLNFVE
201: KALVEDVIPI LQVASHSKLN QLLTHCVQRV ARSDLDDIAL EKKLPQEVTD EIRSLRRKSQ PKESNVTVDP VHEKRIKRIH RALDSDDVEL VKLLLSESGV
301: TLDDTYALHY AAAYCDSKVI AELLDLGSAN VNLKNDKGYT PLHVAAMRRE PKVIVSLLTK GASALETTAD GQNAVRICRR LTRAKDYFTK TEQGQESNKN
401: KLCIDILERE VRRNPMVGED AVTSPLLADD LHMKLLYLEN RVAFARLFFP AEAKVAMEIA HADTTSEFTG LYKSRSSSNL RDVDLNETPV VQNKRLRTRV
501: DTLMKTVELG RRYFPNCSQV LDKFLDDDLP DLFYLQKGSP DEQKIKKLRF CELKEDVRKA FSKDKAGSLL SGLSSLSSSS LPKD

Best Arabidopsis Sequence Match ( AT5G45110.1 )
(BLAST)

001: MATLTEPSSS LSFTSSHFSY GSIGSNHFSS SSASNPEVVS LTKLSSNLEQ LLSNSDCDYS DAEIIVDGVP VGVHRCILAA RSKFFQDLFK KEKKISKTEK
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT

Arabidopsis Description

NPR3NPR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGU4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.