CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73603	Soybean	cytosol, plastid	94.24	94.24
KRH36735	Soybean	cytosol, plastid	62.03	62.03
KRH11740	Soybean	plastid	61.86	61.86
Solyc07g044980.2.1	Tomato	nucleus	56.78	58.46
PGSC0003DMT400002412	Potato	cytosol	56.95	58.43
GSMUA_Achr5P02120_001	Banana	cytosol	56.78	57.36
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	57.12	56.64
Zm00001d012660_P002	Maize	cytosol	53.39	50.72
EES01524	Sorghum	plastid	53.22	50.56
TraesCS3B01G337700.1	Wheat	plastid	51.36	49.75
TraesCS3D01G302900.1	Wheat	cytosol, plastid	51.19	49.75
HORVU3Hr1G074640.4	Barley	cytosol, plastid	51.53	49.27
TraesCS3A01G298800.1	Wheat	plastid	51.36	49.03
Os01t0767900-01	Rice	plastid	52.54	48.82
Zm00001d034944_P004	Maize	cytosol	35.08	45.49
Os03t0667100-01	Rice	cytosol	44.75	44.82
Zm00001d013581_P001	Maize	cytosol	15.25	44.78
EER91108	Sorghum	plastid	45.08	44.48
TraesCS4D01G017500.1	Wheat	cytosol	44.24	43.79
TraesCS4B01G018900.2	Wheat	cytosol, plastid	44.58	43.76
HORVU4Hr1G003040.1	Barley	cytosol, plastid	43.39	43.46
TraesCS4A01G294400.1	Wheat	cytosol, plastid	44.24	43.43
KRH37416	Soybean	cytosol	38.31	38.83
KRG95113	Soybean	cytosol	18.98	32.18
KRH66789	Soybean	cytosol	23.39	28.34
KRH72058	Soybean	cytosol	22.54	27.94

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100814739	MapMan:11.8.2.1	Gene3D:3.30.710.10	EMBL:ACUP02008504	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_14G031300	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538
GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	UniProt:I1M705	InterPro:IPR000210
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH14520	ProteinID:KRH14520	ProteinID:KRH14520.1
InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12313	PFAM:PF13637
PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF78	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI000233B2B8	SEG:seg

Description

hypothetical protein

Coordinates

chr14:-:2268047..2274217

Molecular Weight (calculated)

66665.1 Da

IEP (calculated)

6.186

GRAVY (calculated)

-0.399

Length

590 amino acids

Sequence
(BLAST)

001: MDNSYDSSSS LSFVSSHLSH GSSNHNVSST TSNEHGENIE ILSLNKLSGS LEKLLIEVEY DYSDAEILIE DIPVGIHRCI LASRSPFFHE LFKKGTDGSG
101: KEGKPRYLMS DLMPYGTVGY QAFQVFLYYL YTGRLKASPT EETTCVDETC IHVACRPAIN HALELMYASA TFQMKELVLL FQRHLLNFVE KALVEDVIPI
201: LMAAFNCQLD QLLSRCIQRV ARSDFDNTSL EKELPHEVLT EIKSLRLSFQ PESTPNAMEA ESLNEKSIRR IHKALDSDDV ELLKLLLNES SVTLDDAYAL
301: HYACAYSDSK VIQEVLSLGM ADILRRNSRG YTVLHVAARR KDPSILVALL NKGARASDTT PDGQTALAIC QRLTRCKDYH EKTVQCKESN KDRLCVDVLE
401: REMRRNSMTV NMSVSSQLTA DDLHMRLDYL EDRVAFARLL FPAEARVAIE NAEADSSSLY ANSSALKVTN GNPKEVDLNE SPSARTRKLQ LRLHALMKTV
501: ENGRRFFPHC SEVLDKFLED DEMPDVFFLE KGSEEEQRIK KARFMELKDD VQKAFHKDMA ENNHSGFSST VSSSSSSTRR EGLNHRVRRK

Best Arabidopsis Sequence Match ( AT1G64280.1 )
(BLAST)

001: MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR

Arabidopsis Description

NPR1Regulatory protein NPR1 [Source:UniProtKB/Swiss-Prot;Acc:P93002]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.