Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74919 | Canola | cytosol | 97.82 | 97.58 |
| AT2G38000.1 | Thale cress | cytosol | 87.38 | 85.92 |
| KRH49254 | Soybean | endoplasmic reticulum | 64.56 | 62.3 |
| VIT_08s0007g01660.t01 | Wine grape | cytosol | 63.84 | 60.88 |
| Solyc09g011880.2.1 | Tomato | nucleus | 63.59 | 60.79 |
| PGSC0003DMT400052379 | Potato | cytosol | 63.11 | 60.05 |
| GSMUA_Achr6P14970_001 | Banana | nucleus | 58.98 | 56.12 |
| TraesCS2A01G136800.1 | Wheat | nucleus | 56.31 | 54.46 |
| OQU83401 | Sorghum | nucleus | 58.25 | 52.29 |
| TraesCS2B01G160700.1 | Wheat | nucleus | 57.52 | 51.3 |
| HORVU2Hr1G024150.5 | Barley | nucleus | 57.28 | 50.75 |
| TraesCS2D01G139500.1 | Wheat | nucleus | 57.28 | 50.64 |
| Os05t0316200-01 | Rice | cytosol, nucleus, plastid | 57.52 | 50.64 |
| TraesCS2A01G136700.1 | Wheat | nucleus | 53.4 | 48.46 |
| TraesCS2D01G139400.1 | Wheat | nucleus | 53.64 | 48.36 |
| TraesCS2B01G160600.1 | Wheat | nucleus | 52.91 | 48.12 |
| HORVU2Hr1G024160.1 | Barley | cytosol | 50.24 | 45.7 |
| Zm00001d049192_P002 | Maize | extracellular | 24.27 | 40.0 |
Protein Annotations
Description
AT2G38000 (E=1e-201) | chaperone protein dnaJ-related
Coordinates
chrA05:+:3708187..3710273
Molecular Weight (calculated)
45483.1 Da
IEP (calculated)
7.058
GRAVY (calculated)
-0.307
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKPLLSDKT KESERWDSYQ YLQRNISSAR NNVSFAGAGV TVEEVRSASA VSDPPPLYPP VLTTPVSLPT PEAIGYPSAS GAGHELQRQV LDEIEIRELL
101: IDHIGHRCCW GSRPARTWKI RAVEDCNVYV GTLDTFIEER EALTQTVPFN GGNFKHGSAP ELWQIDLRSQ FPTLFVPYKE TRVPVPHSET VDKCTGCGGR
201: GEVVCPTCNA DGEPGFYKEN QVMKCSKCYG RGLIAHKDGS DSICGECNGG GKLPCPNCQS RGLVKCETCD GSGSLLTSSI AVVKWKTLSK RKVSATRGAG
301: SVPEEVFHRA EGVQLCNTQA YQCTPAYFAD SYFLNKFSSE VISLRAEVPP TANVVCERHA ISVVPVTRVT MEDRGKAFNF YIIGFGKEIY MKDYYPARFC
401: WGLCPCLEWL KV
101: IDHIGHRCCW GSRPARTWKI RAVEDCNVYV GTLDTFIEER EALTQTVPFN GGNFKHGSAP ELWQIDLRSQ FPTLFVPYKE TRVPVPHSET VDKCTGCGGR
201: GEVVCPTCNA DGEPGFYKEN QVMKCSKCYG RGLIAHKDGS DSICGECNGG GKLPCPNCQS RGLVKCETCD GSGSLLTSSI AVVKWKTLSK RKVSATRGAG
301: SVPEEVFHRA EGVQLCNTQA YQCTPAYFAD SYFLNKFSSE VISLRAEVPP TANVVCERHA ISVVPVTRVT MEDRGKAFNF YIIGFGKEIY MKDYYPARFC
401: WGLCPCLEWL KV
001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
Arabidopsis Description
Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.