Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G139400.1 | Wheat | nucleus | 92.94 | 92.12 |
| TraesCS2A01G136700.1 | Wheat | nucleus | 91.61 | 91.41 |
| TraesCS2B01G160700.1 | Wheat | nucleus | 82.34 | 80.74 |
| HORVU2Hr1G024160.1 | Barley | cytosol | 75.28 | 75.28 |
| Os05t0316200-01 | Rice | cytosol, nucleus, plastid | 74.83 | 72.44 |
| OQU83401 | Sorghum | nucleus | 71.52 | 70.59 |
| Zm00001d049192_P002 | Maize | extracellular | 34.44 | 62.4 |
| GSMUA_Achr6P14970_001 | Banana | nucleus | 56.95 | 59.58 |
| VIT_08s0007g01660.t01 | Wine grape | cytosol | 54.97 | 57.64 |
| KRH49254 | Soybean | endoplasmic reticulum | 53.2 | 56.44 |
| Solyc09g011880.2.1 | Tomato | nucleus | 53.64 | 56.38 |
| PGSC0003DMT400052379 | Potato | cytosol | 52.98 | 55.43 |
| CDX91423 | Canola | cytosol | 48.79 | 53.25 |
| Bra005144.1-P | Field mustard | cytosol | 48.12 | 52.91 |
| CDX74919 | Canola | cytosol | 47.68 | 52.3 |
| AT2G38000.1 | Thale cress | cytosol | 48.12 | 52.03 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G160600.1 | EnsemblPlantsGene:TraesCS2B01G160600 | InterPro:HSP_DnaJ_Cys-rich_dom_sf | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF20 | SEG:seg |
| SUPFAM:SSF57938 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:134044692..134049104
Molecular Weight (calculated)
49484.4 Da
IEP (calculated)
6.834
GRAVY (calculated)
-0.340
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMEAEREAG EEEPRRPLLP PSSSPGSPSH LGRSSSSALR GGGGGWAEVS AAEVKSAASF SSSPNYYPPA PNPHHDAVYP PSIHSAVLSP SPATAATPPH
101: SHGLAIVPQG PYPYGGDYQP SQGARRDVLD EVEVRQMLIE HVGHRCCWGS RPARTWKITS IKDCCDVYVG TLETFIEQRD AILEREPYHG GEVDGRDKGP
201: VLGVWELDLR SEFPPLFVPE KEVRVKIPHS QVTEKCSDCE GRGKVPCPTC NPGRQYGFYM ANQMTQCSVC QGRGSLAQQD ESDSVCWMCN GQGVLPCTEC
301: GSRGIVTCRT CNGCGSLLTQ SIARVRWETL TARKVSATAE TAAVPDEVFH RAQGAQLCNI QAYQCTPAFF ADSYPLNQLS SEVVASRLPV PPSAIVISER
401: HIISVVPVTH VTMSHRKRSF SFYVVGYGRD VFVRNYPSRF CWGLCCCFEW LGN
101: SHGLAIVPQG PYPYGGDYQP SQGARRDVLD EVEVRQMLIE HVGHRCCWGS RPARTWKITS IKDCCDVYVG TLETFIEQRD AILEREPYHG GEVDGRDKGP
201: VLGVWELDLR SEFPPLFVPE KEVRVKIPHS QVTEKCSDCE GRGKVPCPTC NPGRQYGFYM ANQMTQCSVC QGRGSLAQQD ESDSVCWMCN GQGVLPCTEC
301: GSRGIVTCRT CNGCGSLLTQ SIARVRWETL TARKVSATAE TAAVPDEVFH RAQGAQLCNI QAYQCTPAFF ADSYPLNQLS SEVVASRLPV PPSAIVISER
401: HIISVVPVTH VTMSHRKRSF SFYVVGYGRD VFVRNYPSRF CWGLCCCFEW LGN
001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
Arabidopsis Description
Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.