Factsheet for GSMUA_Achr6P14970_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g01660.t01	Wine grape	cytosol	66.05	66.2
KRH49254	Soybean	endoplasmic reticulum	64.43	65.34
PGSC0003DMT400052379	Potato	cytosol	63.28	63.28
Solyc09g011880.2.1	Tomato	nucleus	62.59	62.88
TraesCS2A01G136800.1	Wheat	nucleus	60.74	61.74
AT2G38000.1	Thale cress	cytosol	59.58	61.58
OQU83401	Sorghum	nucleus	64.43	60.78
Os05t0316200-01	Rice	cytosol, nucleus, plastid	64.43	59.62
HORVU2Hr1G024150.5	Barley	nucleus	63.74	59.35
TraesCS2B01G160700.1	Wheat	nucleus	63.28	59.31
TraesCS2D01G139500.1	Wheat	nucleus	63.74	59.23
Bra005144.1-P	Field mustard	cytosol	56.12	58.98
CDX91423	Canola	cytosol	56.35	58.8
CDX74919	Canola	cytosol	55.66	58.35
TraesCS2B01G160600.1	Wheat	nucleus	59.58	56.95
TraesCS2D01G139400.1	Wheat	nucleus	59.82	56.67
TraesCS2A01G136700.1	Wheat	nucleus	57.97	55.29
HORVU2Hr1G024160.1	Barley	cytosol	55.66	53.2
Zm00001d049192_P002	Maize	extracellular	28.18	48.8

Protein Annotations

EnsemblPlants:GSMUA_Achr6P14970_001	EnsemblPlants:GSMUA_Achr6T14970_001	EnsemblPlantsGene:GSMUA_Achr6G14970_001	PANTHER:PTHR15852	PANTHER:PTHR15852:SF20	SEG:seg
UniParc:UPI000294E694	UniProt:M0T745	MapMan:35.2	:	:	:

Description

chaperone protein dnaJ-related [Source:Projected from Arabidopsis thaliana (AT2G38000) TAIR;Acc:AT2G38000]

Coordinates

chr6:-:9942185..9947223

Molecular Weight (calculated)

47972.9 Da

IEP (calculated)

6.842

GRAVY (calculated)

-0.295

Length

433 amino acids

Sequence
(BLAST)

001: MEQQPLLSSG EAGGKAEESL VSYQYVGRSP SVHAPPSSVA AGKELSVEEI RAASVFSSDH YYPPSIHGAL VGSPESDFSQ VVTDQAIIPQ GGYDGYSGGY
101: SSKEFGRQIL DEVEVRQLLI DHVGHRCCWG SQPARRWKIC SIEDCNVYVG TLETFIEERE TIEEKEPYLG GKFDGKEKGQ EFGVWELDLR SEFPILFVPQ
201: KETRVKIPHS EAVEKCPECD SRGDIVCPTC NAGQERGFYK ENQMTQCAPC YGRGLIAHRD GSDTICTRCS GKGMLPCATC GSRGLVKCHS CEGQGSLITR
301: NIALVKWKTL SNRKVSATSA AASVPDEVFH RARGVQLCNI QAYQCTPAFF ADSYLLNRFS SEVIANRSPI PPAARVICER HMISVVPVTR VTMGHGNRSF
401: SFYIIGYSRE VFIRDYPKKF CWGLCCCFDW LKV

Best Arabidopsis Sequence Match ( AT2G38000.1 )
(BLAST)

001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV

Arabidopsis Description

Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.