Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049192_P002 | Maize | extracellular | 45.75 | 84.0 |
| TraesCS2A01G136800.1 | Wheat | nucleus | 74.07 | 79.81 |
| Os05t0316200-01 | Rice | cytosol, nucleus, plastid | 80.39 | 78.85 |
| TraesCS2D01G139500.1 | Wheat | nucleus | 79.52 | 78.33 |
| TraesCS2B01G160700.1 | Wheat | nucleus | 78.65 | 78.14 |
| HORVU2Hr1G024150.5 | Barley | nucleus | 78.21 | 77.2 |
| TraesCS2D01G139400.1 | Wheat | nucleus | 71.24 | 71.55 |
| TraesCS2B01G160600.1 | Wheat | nucleus | 70.59 | 71.52 |
| TraesCS2A01G136700.1 | Wheat | nucleus | 67.97 | 68.72 |
| GSMUA_Achr6P14970_001 | Banana | nucleus | 60.78 | 64.43 |
| HORVU2Hr1G024160.1 | Barley | cytosol | 62.53 | 63.36 |
| VIT_08s0007g01660.t01 | Wine grape | cytosol | 58.61 | 62.27 |
| KRH49254 | Soybean | endoplasmic reticulum | 57.3 | 61.59 |
| Solyc09g011880.2.1 | Tomato | nucleus | 55.56 | 59.16 |
| PGSC0003DMT400052379 | Potato | cytosol | 55.12 | 58.43 |
| Bra005144.1-P | Field mustard | cytosol | 52.29 | 58.25 |
| CDX91423 | Canola | cytosol | 52.29 | 57.83 |
| CDX74919 | Canola | cytosol | 51.85 | 57.63 |
| AT2G38000.1 | Thale cress | cytosol | 52.07 | 57.04 |
Protein Annotations
| EnsemblPlants:OQU83401 | EnsemblPlantsGene:SORBI_3005G110544 | EntrezGene:8155505 | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF20 | ProteinID:EES20390.1 |
| ProteinID:KXG18878.1 | ProteinID:OQU83401 | ProteinID:OQU83401.1 | RefSeq:XP_002489146.1 | SEG:seg | UniParc:UPI0001AFF7AA |
| UniProt:C6JS31 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:34355373..34363638
Molecular Weight (calculated)
50098.2 Da
IEP (calculated)
6.833
GRAVY (calculated)
-0.318
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAEEERDGE EQRRPLLSSA PPAAADQHQQ QYQFLGRSSS SVLRGGGGGW EGPEVSADEV RSAASFSSAA GFYPPPYGDH AYAYPPSIHS ALLSPSPSHA
101: PSSPHPNAEA LAIVPQGPYP YGGSYQPSES VGRDVLDEVE IRQLLIDHIG HRCCWGSHPA RTWKITSIED CNVYVGTLET FIEERHIITK KEPYESGNID
201: GREKGPLLGL WELDLRSKFP ALFVPEEEVI VKIPHSDIIE KCSDCEGRGE KPCPTCNAGQ EHGVYKANQM TRCGACHGRG LLAHQDGSDT ICGMCNGKGM
301: LPCIACGSRG LVTCNTCTGY GSLLAQSMAH VQWKTLSARK VSAARGAASV PEEVFHRAKG VQLCNIQAYQ CTPAFFADSY PLNQFSSEVI ASRLPVPPSA
401: RVISERHIIS VVPVTRVTMA HRKKSFSFYV VGYSRDVFIR DYPSKFCWGL CCCFEWLGK
101: PSSPHPNAEA LAIVPQGPYP YGGSYQPSES VGRDVLDEVE IRQLLIDHIG HRCCWGSHPA RTWKITSIED CNVYVGTLET FIEERHIITK KEPYESGNID
201: GREKGPLLGL WELDLRSKFP ALFVPEEEVI VKIPHSDIIE KCSDCEGRGE KPCPTCNAGQ EHGVYKANQM TRCGACHGRG LLAHQDGSDT ICGMCNGKGM
301: LPCIACGSRG LVTCNTCTGY GSLLAQSMAH VQWKTLSARK VSAARGAASV PEEVFHRAKG VQLCNIQAYQ CTPAFFADSY PLNQFSSEVI ASRLPVPPSA
401: RVISERHIIS VVPVTRVTMA HRKKSFSFYV VGYSRDVFIR DYPSKFCWGL CCCFEWLGK
001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
Arabidopsis Description
Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.